RNA–Protein interactions for RNA: ENST00000377390.7

SF1-204, Transcript of splicing factor 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SF1, Length 3,470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-204ENST00000377390 TRIAP1O43715 76 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 DGAT2L7PQ6IED9 249 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 CLPSL1A2RUU4 121 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 A8MZ25 164 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 RNF223E7ERA6 249 aa9.14□□□□□ -0.95
SF1-204ENST00000377390 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.13□□□□□ -0.95
SF1-204ENST00000377390 OVOL1O14753 267 aa9.13□□□□□ -0.95
SF1-204ENST00000377390 IGHV4-38-2P0DP08 117 aa9.13□□□□□ -0.95
SF1-204ENST00000377390 UBE2E1P51965 193 aa9.13□□□□□ -0.95
SF1-204ENST00000377390 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
SF1-204ENST00000377390 RHPN1-AS1Q9BWJ2 59 aa9.13□□□□□ -0.95
SF1-204ENST00000377390 IGHV4-30-2A0A087WSY4 118 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 NPFFO15130 113 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 BLCAPP62952 87 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 HERVK_113P63121 156 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 IGLV4-69A0A075B6H9 119 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 TSHBP01222 138 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 COX6B1P14854 86 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 TIMM21Q9BVV7 248 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 TRBV10-2A0A0K0K1G8 114 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 LINC01546A6NGU7 62 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 LGALS9O00182 355 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 GAGE2AQ6NT46 116 aa9.12□□□□□ -0.95
SF1-204ENST00000377390 COL27A1Q8IZC6 1860 aaPredicted RBP9.12□□□□□ -0.95
SF1-204ENST00000377390 TRBV7-1A0A0A6YYK4 115 aa9.11□□□□□ -0.95
SF1-204ENST00000377390 TRAV13-1A0A0B4J241 112 aa9.11□□□□□ -0.95
SF1-204ENST00000377390 M0R1W7 72 aa9.11□□□□□ -0.95
SF1-204ENST00000377390 ITLN2Q8WWU7 325 aaPredicted RBP9.11□□□□□ -0.95
SF1-204ENST00000377390 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
SF1-204ENST00000377390 MUC4Q99102 2169 aa9.11□□□□□ -0.95
SF1-204ENST00000377390 NBPF19A0A087WUL8 3843 aa9.11□□□□□ -0.95
SF1-204ENST00000377390 LINC01619G3V211 115 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 RNASE3P12724 160 aaKnown RBP9.1□□□□□ -0.95
SF1-204ENST00000377390 SPINK13Q1W4C9 94 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 C10orf99Q6UWK7 81 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 TMEM126AQ9H061 195 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 MDFICQ9P1T7 246 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 NDUFA12Q9UI09 145 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 GPHB5Q86YW7 130 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 BBC3Q96PG8 261 aaPredicted RBP9.1□□□□□ -0.95
SF1-204ENST00000377390 PSMG3-AS1Q96PY0 264 aa9.1□□□□□ -0.95
SF1-204ENST00000377390 CSDC2Q9Y534 153 aaKnown RBP9.1□□□□□ -0.95
SF1-204ENST00000377390 MAST4O15021 2626 aa9.09□□□□□ -0.95
SF1-204ENST00000377390 IGIPA6NJ69 53 aa9.09□□□□□ -0.95
SF1-204ENST00000377390 NSUN5P1Q3KNT7 163 aa9.09□□□□□ -0.95
SF1-204ENST00000377390 IGHV3-38A0A0C4DH36 116 aa9.09□□□□□ -0.95
SF1-204ENST00000377390 MINOS1Q5TGZ0 78 aa9.09□□□□□ -0.95
SF1-204ENST00000377390 FAM19A5Q7Z5A7 132 aaPredicted RBP9.09□□□□□ -0.95
SF1-204ENST00000377390 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
SF1-204ENST00000377390 IGHV1-69DA0A0B4J2H0 117 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 H7C423 109 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 KRTAP10-9P60411 292 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 F8P00451 2351 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 MGAM2Q2M2H8 2515 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 hADV29S1A0JD25 119 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 P0DMU3 169 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 FAM231AP0DMU4 169 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 FAM231CP0DMU5 169 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 IGF2-ASQ6U949 168 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 MINOS1-NBL1R4GNA1 71 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 LEPROTO15243 131 aa9.08□□□□□ -0.96
SF1-204ENST00000377390 IGHV4-4A0A075B6R2 117 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 A0A0J9YXY3 114 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 IGHV3-30-3P0DP02 117 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 LY6G5BQ8NDX9 201 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 IGHV3OR16-12A0A075B7B8 117 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 RHOHQ15669 191 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 C5orf47Q569G3 176 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
SF1-204ENST00000377390 APCP25054 2843 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 DEFB136Q30KP8 78 aa9.07□□□□□ -0.96
SF1-204ENST00000377390 NDUFA7O95182 113 aa9.06□□□□□ -0.96
SF1-204ENST00000377390 ODF3BA8MYP8 253 aa9.06□□□□□ -0.96
SF1-204ENST00000377390 TIMM17AQ99595 171 aa9.06□□□□□ -0.96
SF1-204ENST00000377390 EDN2P20800 178 aa9.06□□□□□ -0.96
SF1-204ENST00000377390 HOXD3P31249 432 aaPredicted RBP9.06□□□□□ -0.96
SF1-204ENST00000377390 POLR2KP53803 58 aaKnown RBP9.06□□□□□ -0.96
SF1-204ENST00000377390 MRPL53Q96EL3 112 aaKnown RBP9.06□□□□□ -0.96
SF1-204ENST00000377390 IGKV3D-7A0A0C4DH55 119 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 SMIM9A6NGZ8 99 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 OR13C6PQ8NH95 151 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 SETXQ7Z333 2677 aaKnown RBP9.05□□□□□ -0.96
SF1-204ENST00000377390 IGHV3-16A0A0C4DH30 117 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 PRM2P04554 102 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 PIMREGQ9BSJ6 248 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 LENEPQ9Y5L5 61 aa9.05□□□□□ -0.96
SF1-204ENST00000377390 J3KT08 172 aa9.04□□□□□ -0.96
SF1-204ENST00000377390 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
SF1-204ENST00000377390 TMEM223A0PJW6 202 aa9.04□□□□□ -0.96
SF1-204ENST00000377390 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
SF1-204ENST00000377390 SYNJ2BPP57105 145 aa9.04□□□□□ -0.96
SF1-204ENST00000377390 SBSPONQ8IVN8 264 aa9.04□□□□□ -0.96
SF1-204ENST00000377390 UNC79Q9P2D8 2635 aa9.04□□□□□ -0.96
SF1-204ENST00000377390 PROK1P58294 105 aa9.04□□□□□ -0.96
SF1-204ENST00000377390 CIRBPQ14011 172 aaKnown RBP9.04□□□□□ -0.96
SF1-204ENST00000377390 I3L3M4 83 aa9.03□□□□□ -0.96
SF1-204ENST00000377390 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
SF1-204ENST00000377390 LINC01587Q99440 93 aa9.03□□□□□ -0.96
SF1-204ENST00000377390 IGHV4-59P01825 116 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms