RNA–Protein interactions for RNA: ENST00000375850.3

C9orf47-202, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene C9orf47, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-202ENST00000375850 GNG4P50150 75 aa14.77□□□□□ -0.05
C9orf47-202ENST00000375850 RAB5CP51148 216 aa14.77□□□□□ -0.05
C9orf47-202ENST00000375850 COTL1Q14019 142 aa14.77□□□□□ -0.05
C9orf47-202ENST00000375850 A0A087WYN8 130 aa14.76□□□□□ -0.05
C9orf47-202ENST00000375850 MT1HL1P0DM35 61 aa14.76□□□□□ -0.05
C9orf47-202ENST00000375850 SULT1A2P50226 295 aa14.76□□□□□ -0.05
C9orf47-202ENST00000375850 SPACA4Q8TDM5 124 aa14.76□□□□□ -0.05
C9orf47-202ENST00000375850 PDE6DO43924 150 aa14.75□□□□□ -0.05
C9orf47-202ENST00000375850 IFNA1P01562 189 aa14.75□□□□□ -0.05
C9orf47-202ENST00000375850 AMTP48728 403 aa14.75□□□□□ -0.05
C9orf47-202ENST00000375850 EIF5AL1Q6IS14 154 aaKnown RBP14.74□□□□□ -0.05
C9orf47-202ENST00000375850 C7orf33Q8WU49 177 aa14.74□□□□□ -0.05
C9orf47-202ENST00000375850 GFRA4Q9GZZ7 299 aa14.74□□□□□ -0.05
C9orf47-202ENST00000375850 PLAC8Q9NZF1 115 aa14.74□□□□□ -0.05
C9orf47-202ENST00000375850 SLPIP03973 132 aa14.73□□□□□ -0.05
C9orf47-202ENST00000375850 NTF3P20783 257 aa14.73□□□□□ -0.05
C9orf47-202ENST00000375850 LYZL1Q6UWQ5 148 aa14.73□□□□□ -0.05
C9orf47-202ENST00000375850 C9orf62Q8N4C0 152 aa14.73□□□□□ -0.05
C9orf47-202ENST00000375850 UBR4Q5T4S7 5183 aa14.72□□□□□ -0.05
C9orf47-202ENST00000375850 CTRLP40313 264 aa14.71□□□□□ -0.05
C9orf47-202ENST00000375850 MEF2BQ02080 365 aaPredicted RBP14.71□□□□□ -0.05
C9orf47-202ENST00000375850 CNFNQ9BYD5 112 aa14.71□□□□□ -0.05
C9orf47-202ENST00000375850 RAB19A4D1S5 217 aa14.7□□□□□ -0.06
C9orf47-202ENST00000375850 CHTF8P0CG12 524 aa14.7□□□□□ -0.06
C9orf47-202ENST00000375850 RPS10P46783 165 aaKnown RBP14.7□□□□□ -0.06
C9orf47-202ENST00000375850 GAGE12HA6NDE8 117 aa14.69□□□□□ -0.06
C9orf47-202ENST00000375850 H7C423 109 aa14.69□□□□□ -0.06
C9orf47-202ENST00000375850 NCR2O95944 276 aa14.69□□□□□ -0.06
C9orf47-202ENST00000375850 C15orf56Q8N910 161 aa14.69□□□□□ -0.06
C9orf47-202ENST00000375850 NDUFS6O75380 124 aaKnown RBP14.68□□□□□ -0.06
C9orf47-202ENST00000375850 MED9Q9NWA0 146 aa14.68□□□□□ -0.06
C9orf47-202ENST00000375850 PKIGQ9Y2B9 76 aa14.68□□□□□ -0.06
C9orf47-202ENST00000375850 TWIST1Q15672 202 aa14.67□□□□□ -0.06
C9orf47-202ENST00000375850 AMMECR1LQ6DCA0 310 aa14.67□□□□□ -0.06
C9orf47-202ENST00000375850 PHOX2AO14813 284 aa14.66□□□□□ -0.06
C9orf47-202ENST00000375850 TAGLN2P37802 199 aaKnown RBP14.66□□□□□ -0.06
C9orf47-202ENST00000375850 COX6A2Q02221 97 aa14.66□□□□□ -0.06
C9orf47-202ENST00000375850 TEX261Q6UWH6 196 aa14.66□□□□□ -0.06
C9orf47-202ENST00000375850 TRBV20OR9-2A0A075B6H5 130 aa14.65□□□□□ -0.06
C9orf47-202ENST00000375850 SMIM15Q7Z3B0 74 aa14.65□□□□□ -0.06
C9orf47-202ENST00000375850 NUDT10Q8NFP7 164 aa14.65□□□□□ -0.06
C9orf47-202ENST00000375850 NUDT11Q96G61 164 aa14.65□□□□□ -0.06
C9orf47-202ENST00000375850 GVQW2A0A096LPI5 108 aaPredicted RBP14.64□□□□□ -0.07
C9orf47-202ENST00000375850 BCL2P10415 239 aa14.64□□□□□ -0.07
C9orf47-202ENST00000375850 GATD1Q8NB37 220 aa14.64□□□□□ -0.07
C9orf47-202ENST00000375850 CHCHD10Q8WYQ3 142 aaPredicted RBP14.64□□□□□ -0.07
C9orf47-202ENST00000375850 RPP21Q9H633 154 aaKnown RBP14.63□□□□□ -0.07
C9orf47-202ENST00000375850 LINC00474Q9P2X8 69 aa14.63□□□□□ -0.07
C9orf47-202ENST00000375850 IGKV3OR2-268A0A0C4DH90 116 aa14.62□□□□□ -0.07
C9orf47-202ENST00000375850 APCSP02743 223 aa14.62□□□□□ -0.07
C9orf47-202ENST00000375850 ZNF25P17030 456 aaPredicted RBP14.62□□□□□ -0.07
C9orf47-202ENST00000375850 MAJINQ3KP22 176 aa14.62□□□□□ -0.07
C9orf47-202ENST00000375850 FAM210AQ96ND0 272 aa14.62□□□□□ -0.07
C9orf47-202ENST00000375850 HIGD2BQ4VC39 106 aa14.61□□□□□ -0.07
C9orf47-202ENST00000375850 RNASEKQ6P5S7 137 aaKnown RBP14.61□□□□□ -0.07
C9orf47-202ENST00000375850 PRSS3P2Q8NHM4 247 aa14.61□□□□□ -0.07
C9orf47-202ENST00000375850 GTSF1Q8WW33 167 aa14.61□□□□□ -0.07
C9orf47-202ENST00000375850 LINC01600Q96MT4 127 aa14.6□□□□□ -0.07
C9orf47-202ENST00000375850 IGKV2-24A0A0C4DH68 120 aa14.59□□□□□ -0.07
C9orf47-202ENST00000375850 FGF6P10767 208 aa14.59□□□□□ -0.07
C9orf47-202ENST00000375850 PRR3P79522 188 aaKnown RBP14.59□□□□□ -0.07
C9orf47-202ENST00000375850 Q6ZNX1 250 aa14.59□□□□□ -0.07
C9orf47-202ENST00000375850 STPG4Q8N801 248 aa14.59□□□□□ -0.07
C9orf47-202ENST00000375850 TRAV26-2A0A0B4J265 109 aa14.58□□□□□ -0.08
C9orf47-202ENST00000375850 OR5A1Q8NGJ0 315 aa14.58□□□□□ -0.08
C9orf47-202ENST00000375850 BTF3L4Q96K17 158 aa14.58□□□□□ -0.08
C9orf47-202ENST00000375850 SDHAF1A6NFY7 115 aa14.57□□□□□ -0.08
C9orf47-202ENST00000375850 TMEM101Q96IK0 257 aa14.57□□□□□ -0.08
C9orf47-202ENST00000375850 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-202ENST00000375850 IGKV2-29A2NJV5 120 aaPredicted RBP14.56□□□□□ -0.08
C9orf47-202ENST00000375850 FOXI1Q12951 378 aa14.56□□□□□ -0.08
C9orf47-202ENST00000375850 RPL39LQ96EH5 51 aaKnown RBP14.56□□□□□ -0.08
C9orf47-202ENST00000375850 RNASE7Q9H1E1 156 aaKnown RBP14.56□□□□□ -0.08
C9orf47-202ENST00000375850 I3L3M4 83 aa14.55□□□□□ -0.08
C9orf47-202ENST00000375850 IGHV1-58A0A0C4DH39 117 aa14.54□□□□□ -0.08
C9orf47-202ENST00000375850 TRBV6-5A0A0K0K1A5 114 aa14.54□□□□□ -0.08
C9orf47-202ENST00000375850 OCC1Q8TAD7 63 aa14.54□□□□□ -0.08
C9orf47-202ENST00000375850 A0A096LNI7 61 aa14.53□□□□□ -0.08
C9orf47-202ENST00000375850 PMCHP20382 165 aa14.53□□□□□ -0.08
C9orf47-202ENST00000375850 SPINK6Q6UWN8 80 aa14.53□□□□□ -0.08
C9orf47-202ENST00000375850 SLC51BQ86UW2 128 aa14.53□□□□□ -0.08
C9orf47-202ENST00000375850 K7EN84 100 aa14.52□□□□□ -0.09
C9orf47-202ENST00000375850 REG3GQ6UW15 175 aa14.52□□□□□ -0.09
C9orf47-202ENST00000375850 LINC00959A0A1B0GUT2 108 aa14.51□□□□□ -0.09
C9orf47-202ENST00000375850 A8MWL6 223 aa14.51□□□□□ -0.09
C9orf47-202ENST00000375850 XCL1P47992 114 aa14.51□□□□□ -0.09
C9orf47-202ENST00000375850 LYPD6BQ8NI32 183 aa14.51□□□□□ -0.09
C9orf47-202ENST00000375850 CARD19Q96LW7 228 aa14.51□□□□□ -0.09
C9orf47-202ENST00000375850 A0A0J9YXV3 536 aa14.5□□□□□ -0.09
C9orf47-202ENST00000375850 SS18Q15532 418 aa14.5□□□□□ -0.09
C9orf47-202ENST00000375850 FAM231DQ6ZW35 169 aa14.5□□□□□ -0.09
C9orf47-202ENST00000375850 MRAP2Q96G30 205 aa14.5□□□□□ -0.09
C9orf47-202ENST00000375850 FAM231BA6NCW3 169 aa14.49□□□□□ -0.09
C9orf47-202ENST00000375850 TMEM250H0YL14 139 aa14.49□□□□□ -0.09
C9orf47-202ENST00000375850 CCL25O15444 150 aa14.49□□□□□ -0.09
C9orf47-202ENST00000375850 GATCO43716 136 aaKnown RBP14.49□□□□□ -0.09
C9orf47-202ENST00000375850 ESDP10768 282 aa14.49□□□□□ -0.09
C9orf47-202ENST00000375850 CT83Q5H943 113 aa14.49□□□□□ -0.09
C9orf47-202ENST00000375850 BORCS7Q96B45 105 aa14.49□□□□□ -0.09
C9orf47-202ENST00000375850 ZNF561-AS1K7EIQ3 104 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms