RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 H3BMM0 161 aa10.27□□□□□ -0.77
MSH5-202ENST00000375740 CRYGDP07320 174 aa10.27□□□□□ -0.77
MSH5-202ENST00000375740 NDUFV3P56181 108 aaKnown RBP10.27□□□□□ -0.77
MSH5-202ENST00000375740 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.77
MSH5-202ENST00000375740 TSPEAR-AS2P59090 65 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 DEFB114Q30KQ6 69 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 C9JAW5 83 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 J3QKU1 62 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 SLC25A20O43772 301 aa10.26□□□□□ -0.77
MSH5-202ENST00000375740 EIF4EBP3O60516 100 aaPredicted RBP10.26□□□□□ -0.77
MSH5-202ENST00000375740 POLR2KP53803 58 aaKnown RBP10.26□□□□□ -0.77
MSH5-202ENST00000375740 RBMY1BA6NDE4 496 aaKnown RBP10.25□□□□□ -0.77
MSH5-202ENST00000375740 RBMY1EA6NEQ0 496 aaKnown RBP10.25□□□□□ -0.77
MSH5-202ENST00000375740 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 RBMY1DP0C7P1 496 aaKnown RBP10.25□□□□□ -0.77
MSH5-202ENST00000375740 KRTAP1-1Q07627 177 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 GAGE2BQ13066 116 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 GAGE2EQ4V326 116 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 YAE1D1Q9NRH1 226 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 GAGE2DQ9UEU5 116 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 IGHV3-30P01768 117 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 IGHV3-30-5P0DP03 117 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 HTN1P15515 57 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 RPL32P62910 135 aaKnown RBP10.25□□□□□ -0.77
MSH5-202ENST00000375740 C10orf126Q8N4M7 172 aa10.25□□□□□ -0.77
MSH5-202ENST00000375740 SONP18583 2426 aaKnown RBP10.25□□□□□ -0.77
MSH5-202ENST00000375740 TRGV11A0A075B6L2 103 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 A0A1W2PRX2 142 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 A8MTW9 85 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 H7C2G1 150 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 ZNF876PQ49A33 203 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 TMEM262E9PQX1 116 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 VCYO14598 125 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 ZNF56Q15929 161 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 PDZD2O15018 2839 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 MYO9AB2RTY4 2548 aa10.24□□□□□ -0.77
MSH5-202ENST00000375740 GAGE12JA6NER3 117 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 GAGE7O76087 117 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 TSHBP01222 138 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 GAGE12FP0CL80 117 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 GAGE12GP0CL81 117 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 GAGE12IP0CL82 117 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 GAGE4Q13068 117 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 IGLV4-69A0A075B6H9 119 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 SDHAF1A6NFY7 115 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 PRM2P04554 102 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 CD28P10747 220 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 VCX2Q9H322 139 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 FLNAP21333 2647 aaKnown RBP10.23□□□□□ -0.77
MSH5-202ENST00000375740 CHD6Q8TD26 2715 aa10.23□□□□□ -0.77
MSH5-202ENST00000375740 M0QY20 66 aa10.22□□□□□ -0.77
MSH5-202ENST00000375740 SNCGO76070 127 aa10.22□□□□□ -0.77
MSH5-202ENST00000375740 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
MSH5-202ENST00000375740 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
MSH5-202ENST00000375740 TRBV6-5A0A0K0K1A5 114 aa10.22□□□□□ -0.77
MSH5-202ENST00000375740 LYRM7Q5U5X0 104 aa10.22□□□□□ -0.77
MSH5-202ENST00000375740 PRO1854Q9UHT4 67 aa10.22□□□□□ -0.77
MSH5-202ENST00000375740 TEX49A0A1B0GTD5 131 aa10.21□□□□□ -0.77
MSH5-202ENST00000375740 TTC32Q5I0X7 151 aa10.21□□□□□ -0.78
MSH5-202ENST00000375740 FAM110AQ9BQ89 295 aa10.21□□□□□ -0.78
MSH5-202ENST00000375740 TP53TG1Q9Y2A0 90 aa10.21□□□□□ -0.78
MSH5-202ENST00000375740 ZNF256Q9Y2P7 627 aaPredicted RBP10.21□□□□□ -0.78
MSH5-202ENST00000375740 TRBV27A0A0K0K1C4 114 aa10.2□□□□□ -0.78
MSH5-202ENST00000375740 IFITM1P13164 125 aa10.2□□□□□ -0.78
MSH5-202ENST00000375740 C3orf56Q8N813 242 aa10.2□□□□□ -0.78
MSH5-202ENST00000375740 A4D1N5 150 aa10.2□□□□□ -0.78
MSH5-202ENST00000375740 CCL24O00175 119 aa10.2□□□□□ -0.78
MSH5-202ENST00000375740 SLC25A29Q8N8R3 303 aa10.2□□□□□ -0.78
MSH5-202ENST00000375740 RPL39P62891 51 aaKnown RBP10.2□□□□□ -0.78
MSH5-202ENST00000375740 IGIPA6NJ69 53 aa10.19□□□□□ -0.78
MSH5-202ENST00000375740 CITED2Q99967 270 aaPredicted RBP10.19□□□□□ -0.78
MSH5-202ENST00000375740 LINC01006Q8NI28 216 aa10.19□□□□□ -0.78
MSH5-202ENST00000375740 AMELXQ99217 191 aa10.19□□□□□ -0.78
MSH5-202ENST00000375740 TMEM170BQ5T4T1 132 aa10.18□□□□□ -0.78
MSH5-202ENST00000375740 ZNRF2Q8NHG8 242 aa10.18□□□□□ -0.78
MSH5-202ENST00000375740 IGHV3-73A0A0B4J1V6 119 aa10.18□□□□□ -0.78
MSH5-202ENST00000375740 IGHV3-33P01772 117 aa10.18□□□□□ -0.78
MSH5-202ENST00000375740 C15orf53Q8NAA6 179 aa10.18□□□□□ -0.78
MSH5-202ENST00000375740 LINC01587Q99440 93 aa10.18□□□□□ -0.78
MSH5-202ENST00000375740 TRAV25A0A0B4J276 109 aa10.17□□□□□ -0.78
MSH5-202ENST00000375740 RNASE1P07998 156 aaKnown RBP10.17□□□□□ -0.78
MSH5-202ENST00000375740 PROK1P58294 105 aa10.17□□□□□ -0.78
MSH5-202ENST00000375740 ODF3L2Q3SX64 289 aa10.17□□□□□ -0.78
MSH5-202ENST00000375740 KMT2BQ9UMN6 2715 aaPredicted RBP10.16□□□□□ -0.78
MSH5-202ENST00000375740 NF1P21359 2839 aa10.16□□□□□ -0.78
MSH5-202ENST00000375740 C16orf95Q9H693 158 aa10.16□□□□□ -0.78
MSH5-202ENST00000375740 AKAP9Q99996 3911 aa10.16□□□□□ -0.78
MSH5-202ENST00000375740 M0R2P5 195 aa10.16□□□□□ -0.78
MSH5-202ENST00000375740 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
MSH5-202ENST00000375740 TMEM141Q96I45 108 aa10.16□□□□□ -0.78
MSH5-202ENST00000375740 IGHV3-64A0A075B6Q5 118 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 P0DMU3 169 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 FAM231AP0DMU4 169 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 FAM231CP0DMU5 169 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 ZNF415Q09FC8 603 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 ACANP16112 2415 aa10.15□□□□□ -0.78
MSH5-202ENST00000375740 PMVKQ15126 192 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms