RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 IGHV1-24A0A0C4DH33 117 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 MT-ND6P03923 174 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 PMCHP20382 165 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 PKIAP61925 76 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 C10orf126Q8N4M7 172 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 PRELID3AQ96N28 172 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 YPEL4Q96NS1 127 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 KRTAP1-5Q9BYS1 174 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 SMCO4Q9NRQ5 59 aa7.71□□□□□ -1.18
HSPG2-202ENST00000374676 PRSS47A8MTI9 375 aa7.7□□□□□ -1.18
HSPG2-202ENST00000374676 NPYP01303 97 aa7.7□□□□□ -1.18
HSPG2-202ENST00000374676 APCSP02743 223 aa7.7□□□□□ -1.18
HSPG2-202ENST00000374676 CHCHD5Q9BSY4 110 aa7.7□□□□□ -1.18
HSPG2-202ENST00000374676 FRAS1Q86XX4 4008 aa7.7□□□□□ -1.18
HSPG2-202ENST00000374676 A0A087WX48 190 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 TSHBP01222 138 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 IGHV3-30P01768 117 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 IGHV3-33P01772 117 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 IGHV3-30-3P0DP02 117 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 IGHV3-30-5P0DP03 117 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 AMTP48728 403 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 TMEM243Q9BU79 118 aa7.69□□□□□ -1.18
HSPG2-202ENST00000374676 IBA57-AS1B1ANH7 110 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 TMEM262E9PQX1 116 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 H7C423 109 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 TCAPO15273 167 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 ESDP10768 282 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 C6orf223Q8N319 242 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 DEFB104AQ8WTQ1 72 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 KIR2DL4Q99706 377 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 SMIM2Q9BVW6 85 aa7.68□□□□□ -1.18
HSPG2-202ENST00000374676 MRPL18Q9H0U6 180 aaKnown RBP7.68□□□□□ -1.18
HSPG2-202ENST00000374676 A0A1B0GUV1 79 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 FABP9Q0Z7S8 132 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 GAGE6Q13070 117 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 LAGE3Q14657 143 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 KIAA1644Q3SXP7 199 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 C1orf134Q5TEV5 83 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 CBLN2Q8IUK8 224 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 Q8N3U1 123 aa7.67□□□□□ -1.18
HSPG2-202ENST00000374676 FCER1GP30273 86 aa7.66□□□□□ -1.18
HSPG2-202ENST00000374676 RBX1P62877 108 aa7.66□□□□□ -1.18
HSPG2-202ENST00000374676 MPV17L2Q567V2 206 aa7.66□□□□□ -1.18
HSPG2-202ENST00000374676 ALKBH7Q9BT30 221 aaPredicted RBP7.66□□□□□ -1.18
HSPG2-202ENST00000374676 MAP1LC3AQ9H492 121 aa7.66□□□□□ -1.18
HSPG2-202ENST00000374676 TRAPPC1Q9Y5R8 145 aa7.66□□□□□ -1.18
HSPG2-202ENST00000374676 UBE2L6O14933 153 aa7.65□□□□□ -1.18
HSPG2-202ENST00000374676 RTL8CO15255 209 aa7.65□□□□□ -1.18
HSPG2-202ENST00000374676 NFE4Q86UQ8 179 aa7.65□□□□□ -1.18
HSPG2-202ENST00000374676 Q8N8P6 123 aa7.65□□□□□ -1.18
HSPG2-202ENST00000374676 KLK12Q9UKR0 248 aa7.65□□□□□ -1.18
HSPG2-202ENST00000374676 TRAV8-3A0A0A6YYJ7 113 aa7.64□□□□□ -1.19
HSPG2-202ENST00000374676 S100A1P23297 94 aa7.64□□□□□ -1.19
HSPG2-202ENST00000374676 LINC00336Q6ZUF6 198 aa7.64□□□□□ -1.19
HSPG2-202ENST00000374676 Q8N976 141 aa7.64□□□□□ -1.19
HSPG2-202ENST00000374676 FAT2Q9NYQ8 4349 aa7.64□□□□□ -1.19
HSPG2-202ENST00000374676 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
HSPG2-202ENST00000374676 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
HSPG2-202ENST00000374676 COLCA2A8K830 154 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 K7EMI3 77 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 FGF6P10767 208 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 ZNF25P17030 456 aaPredicted RBP7.63□□□□□ -1.19
HSPG2-202ENST00000374676 RAB5AP20339 215 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 SMAGPQ0VAQ4 97 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 Q6ZRN7 208 aaPredicted RBP7.63□□□□□ -1.19
HSPG2-202ENST00000374676 MRPL52Q86TS9 123 aaKnown RBP7.63□□□□□ -1.19
HSPG2-202ENST00000374676 C20orf203Q8NBC4 194 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 TMEM18Q96B42 140 aa7.63□□□□□ -1.19
HSPG2-202ENST00000374676 NXT2Q9NPJ8 142 aaKnown RBP7.63□□□□□ -1.19
HSPG2-202ENST00000374676 ANGP03950 147 aaKnown RBP7.62□□□□□ -1.19
HSPG2-202ENST00000374676 IFI27P40305 119 aaPredicted RBP7.62□□□□□ -1.19
HSPG2-202ENST00000374676 Q0VG73 95 aa7.62□□□□□ -1.19
HSPG2-202ENST00000374676 AMMECR1LQ6DCA0 310 aa7.62□□□□□ -1.19
HSPG2-202ENST00000374676 PRR34Q9NV39 138 aa7.62□□□□□ -1.19
HSPG2-202ENST00000374676 IGLV4-60A0A075B6I1 120 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 ATP6V1G1O75348 118 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 ORMDL2Q53FV1 153 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 RNASEKQ6P5S7 137 aaKnown RBP7.61□□□□□ -1.19
HSPG2-202ENST00000374676 ENHOQ6UWT2 76 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 LINC00269Q8N2A0 174 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 UBE2WQ96B02 151 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 RMI2Q96E14 147 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 TMEM101Q96IK0 257 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 TIMM21Q9BVV7 248 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 TM2D2Q9BX73 214 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 CSDC2Q9Y534 153 aaKnown RBP7.61□□□□□ -1.19
HSPG2-202ENST00000374676 COX11Q9Y6N1 276 aa7.61□□□□□ -1.19
HSPG2-202ENST00000374676 PKD1P98161 4303 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 LINC01546A6NGU7 62 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 SCO1O75880 301 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 CRPP02741 224 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 MIAQ16674 131 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 PRSS3P2Q8NHM4 247 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 Q9HAA7 133 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 DNAH11Q96DT5 4516 aa7.6□□□□□ -1.19
HSPG2-202ENST00000374676 PRSS29PA6NIE9 313 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 G0S2P27469 103 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 REG3AQ06141 175 aa7.59□□□□□ -1.19
HSPG2-202ENST00000374676 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms