RNA–Protein interactions for RNA: ENST00000372857.7

PABPC4-202, Transcript of poly(A) binding protein cytoplasmic 4, humanhuman

TSL 1 (best) BASIC

Gene PABPC4, Length 3,048 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC4-202ENST00000372857 DUX3Q96PT4 197 aa11.74□□□□□ -0.53
PABPC4-202ENST00000372857 KLLNB2CW77 178 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 M0QY20 66 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 IGHV1-69P01742 117 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 IGHV3-30-3P0DP02 117 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 TRBV30A0A0K0K1B3 111 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 ADAMTSL4-AS1Q5T5F5 129 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 ICOSQ9Y6W8 199 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 NPFFO15130 113 aa11.73□□□□□ -0.53
PABPC4-202ENST00000372857 IGLV4-3A0A075B6K6 122 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 A8MZ25 164 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 NSUN5P1Q3KNT7 163 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 C20orf203Q8NBC4 194 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 NRGNQ92686 78 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 TRBV6-5A0A0K0K1A5 114 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 CEMP1Q6PRD7 247 aaPredicted RBP11.72□□□□□ -0.53
PABPC4-202ENST00000372857 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
PABPC4-202ENST00000372857 UCNP55089 124 aa11.71□□□□□ -0.53
PABPC4-202ENST00000372857 TIMM21Q9BVV7 248 aa11.71□□□□□ -0.53
PABPC4-202ENST00000372857 CSDC2Q9Y534 153 aaKnown RBP11.71□□□□□ -0.53
PABPC4-202ENST00000372857 LITAFQ99732 161 aa11.71□□□□□ -0.54
PABPC4-202ENST00000372857 CHCHD5Q9BSY4 110 aa11.7□□□□□ -0.54
PABPC4-202ENST00000372857 MYO9AB2RTY4 2548 aa11.7□□□□□ -0.54
PABPC4-202ENST00000372857 RHOHQ15669 191 aa11.7□□□□□ -0.54
PABPC4-202ENST00000372857 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
PABPC4-202ENST00000372857 SONP18583 2426 aaKnown RBP11.7□□□□□ -0.54
PABPC4-202ENST00000372857 LMO4P61968 165 aa11.7□□□□□ -0.54
PABPC4-202ENST00000372857 IGHV3-16A0A0C4DH30 117 aa11.69□□□□□ -0.54
PABPC4-202ENST00000372857 MRPL23Q16540 153 aaKnown RBP11.69□□□□□ -0.54
PABPC4-202ENST00000372857 C5orf47Q569G3 176 aa11.69□□□□□ -0.54
PABPC4-202ENST00000372857 C19orf54Q5BKX5 351 aa11.69□□□□□ -0.54
PABPC4-202ENST00000372857 CD28P10747 220 aa11.69□□□□□ -0.54
PABPC4-202ENST00000372857 SPANXA1Q9NS26 97 aa11.69□□□□□ -0.54
PABPC4-202ENST00000372857 DOPEY1Q5JWR5 2465 aa11.68□□□□□ -0.54
PABPC4-202ENST00000372857 IGHV3-73A0A0B4J1V6 119 aa11.68□□□□□ -0.54
PABPC4-202ENST00000372857 A0A0J9YX75 114 aa11.68□□□□□ -0.54
PABPC4-202ENST00000372857 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
PABPC4-202ENST00000372857 DAND5Q8N907 189 aa11.68□□□□□ -0.54
PABPC4-202ENST00000372857 NDUFA12Q9UI09 145 aa11.68□□□□□ -0.54
PABPC4-202ENST00000372857 LOC107984640A0A0U1RRK4 108 aa11.67□□□□□ -0.54
PABPC4-202ENST00000372857 I3L3M4 83 aa11.67□□□□□ -0.54
PABPC4-202ENST00000372857 COX6CP09669 75 aa11.67□□□□□ -0.54
PABPC4-202ENST00000372857 C9orf85Q96MD7 179 aa11.67□□□□□ -0.54
PABPC4-202ENST00000372857 IGHV4-61A0A0C4DH41 118 aa11.67□□□□□ -0.54
PABPC4-202ENST00000372857 IGHV4-38-2P0DP08 117 aa11.66□□□□□ -0.54
PABPC4-202ENST00000372857 MAPK1IP1LQ8NDC0 245 aa11.66□□□□□ -0.54
PABPC4-202ENST00000372857 EPG5Q9HCE0 2579 aa11.66□□□□□ -0.54
PABPC4-202ENST00000372857 LINC01600Q96MT4 127 aa11.65□□□□□ -0.54
PABPC4-202ENST00000372857 SPINK13Q1W4C9 94 aa11.65□□□□□ -0.54
PABPC4-202ENST00000372857 DAZ1Q9NQZ3 744 aaKnown RBP11.65□□□□□ -0.54
PABPC4-202ENST00000372857 CCDC168Q8NDH2 2452 aa11.65□□□□□ -0.54
PABPC4-202ENST00000372857 H3BT86 120 aa11.65□□□□□ -0.55
PABPC4-202ENST00000372857 NAV2Q8IVL1 2488 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 TRGV11A0A075B6L2 103 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 HTN1P15515 57 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 PROK1P58294 105 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 FAM104AQ969W3 186 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 TMEM126AQ9H061 195 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 DCANP1Q8TF63 244 aa11.64□□□□□ -0.55
PABPC4-202ENST00000372857 ANKRD17O75179 2603 aaKnown RBP11.64□□□□□ -0.55
PABPC4-202ENST00000372857 BLCAPP62952 87 aa11.63□□□□□ -0.55
PABPC4-202ENST00000372857 MIAQ16674 131 aa11.63□□□□□ -0.55
PABPC4-202ENST00000372857 IGHV1-58A0A0C4DH39 117 aa11.63□□□□□ -0.55
PABPC4-202ENST00000372857 LST1O00453 97 aa11.63□□□□□ -0.55
PABPC4-202ENST00000372857 TRAV25A0A0B4J276 109 aa11.62□□□□□ -0.55
PABPC4-202ENST00000372857 MRPS36P82909 103 aaKnown RBP11.62□□□□□ -0.55
PABPC4-202ENST00000372857 MXRA5Q9NR99 2828 aa11.62□□□□□ -0.55
PABPC4-202ENST00000372857 TMEM61Q8N0U2 210 aa11.62□□□□□ -0.55
PABPC4-202ENST00000372857 SPANXDQ9BXN6 97 aa11.62□□□□□ -0.55
PABPC4-202ENST00000372857 SPANXCQ9NY87 97 aa11.62□□□□□ -0.55
PABPC4-202ENST00000372857 Q9UF83 564 aa11.62□□□□□ -0.55
PABPC4-202ENST00000372857 USMG5Q96IX5 58 aa11.61□□□□□ -0.55
PABPC4-202ENST00000372857 FBN2P35556 2912 aa11.61□□□□□ -0.55
PABPC4-202ENST00000372857 IGHV1OR15-1A0A075B7D0 117 aa11.61□□□□□ -0.55
PABPC4-202ENST00000372857 DUX5Q96PT3 197 aa11.61□□□□□ -0.55
PABPC4-202ENST00000372857 LINC01587Q99440 93 aa11.61□□□□□ -0.55
PABPC4-202ENST00000372857 H3BUX3 64 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 VSIG2Q96IQ7 327 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 LINC00694P0DN24 101 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 IGHV4-30-2A0A087WSY4 118 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 A0A0U1RRA0 63 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 FAM236AA0A1B0GUQ0 79 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 FAM236BA0A1B0GV22 79 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 KNCNA6PVL3 124 aa11.6□□□□□ -0.55
PABPC4-202ENST00000372857 SMIM9A6NGZ8 99 aa11.59□□□□□ -0.55
PABPC4-202ENST00000372857 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.58□□□□□ -0.56
PABPC4-202ENST00000372857 FAM240AA0A1B0GVK7 77 aa11.58□□□□□ -0.56
PABPC4-202ENST00000372857 IGKV2-29A2NJV5 120 aaPredicted RBP11.58□□□□□ -0.56
PABPC4-202ENST00000372857 PRM2P04554 102 aa11.58□□□□□ -0.56
PABPC4-202ENST00000372857 WNK1Q9H4A3 2382 aa11.58□□□□□ -0.56
PABPC4-202ENST00000372857 CCL19Q99731 98 aa11.58□□□□□ -0.56
PABPC4-202ENST00000372857 HIST2H2BDQ6DRA6 164 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 C10orf99Q6UWK7 81 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 C9orf153Q5TBE3 101 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 ZNF625Q96I27 306 aaPredicted RBP11.57□□□□□ -0.56
PABPC4-202ENST00000372857 TEX15Q9BXT5 2789 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 NACAE9PAV3 2078 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 DEFB121Q5J5C9 76 aa11.57□□□□□ -0.56
PABPC4-202ENST00000372857 PYGO1Q9Y3Y4 419 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms