RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 NF1P21359 2839 aa20.99■□□□□ 0.95
SSBP3-204ENST00000371320 TMEM223A0PJW6 202 aa20.98■□□□□ 0.95
SSBP3-204ENST00000371320 LGALS3P17931 250 aaKnown RBP20.98■□□□□ 0.95
SSBP3-204ENST00000371320 AZU1P20160 251 aa20.98■□□□□ 0.95
SSBP3-204ENST00000371320 HELZ2Q9BYK8 2649 aaKnown RBP20.97■□□□□ 0.95
SSBP3-204ENST00000371320 A0A0J9YXV3 536 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 RS1O15537 224 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 IGHV3-53P01767 116 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 RNASE1P07998 156 aaKnown RBP20.97■□□□□ 0.95
SSBP3-204ENST00000371320 RRN3P1Q2M238 152 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 IGHV3OR16-12A0A075B7B8 117 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 K7ERU9 68 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 ZNF22P17026 224 aaPredicted RBP20.97■□□□□ 0.95
SSBP3-204ENST00000371320 C16orf95Q9H693 158 aa20.97■□□□□ 0.95
SSBP3-204ENST00000371320 NACAE9PAV3 2078 aa20.96■□□□□ 0.95
SSBP3-204ENST00000371320 C1orf158Q8N1D5 194 aa20.96■□□□□ 0.95
SSBP3-204ENST00000371320 LEPROTO15243 131 aa20.95■□□□□ 0.94
SSBP3-204ENST00000371320 DNAJC30Q96LL9 226 aa20.95■□□□□ 0.94
SSBP3-204ENST00000371320 AMELXQ99217 191 aa20.95■□□□□ 0.94
SSBP3-204ENST00000371320 PDZD2O15018 2839 aa20.94■□□□□ 0.94
SSBP3-204ENST00000371320 CEMP1Q6PRD7 247 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-204ENST00000371320 FAM104AQ969W3 186 aa20.93■□□□□ 0.94
SSBP3-204ENST00000371320 WNK1Q9H4A3 2382 aa20.93■□□□□ 0.94
SSBP3-204ENST00000371320 CRYBA4P53673 196 aa20.93■□□□□ 0.94
SSBP3-204ENST00000371320 CHCHD7Q9BUK0 85 aa20.93■□□□□ 0.94
SSBP3-204ENST00000371320 SPANXB1Q9NS25 103 aaPredicted RBP20.93■□□□□ 0.94
SSBP3-204ENST00000371320 SLC25A29Q8N8R3 303 aa20.92■□□□□ 0.94
SSBP3-204ENST00000371320 SAP30O75446 220 aa20.9■□□□□ 0.94
SSBP3-204ENST00000371320 UBE2D1P51668 147 aa20.9■□□□□ 0.94
SSBP3-204ENST00000371320 IGHV3-64A0A075B6Q5 118 aa20.9■□□□□ 0.94
SSBP3-204ENST00000371320 SPANXA1Q9NS26 97 aa20.9■□□□□ 0.94
SSBP3-204ENST00000371320 IGHV3-38A0A0C4DH36 116 aa20.89■□□□□ 0.93
SSBP3-204ENST00000371320 PGPEP1Q9NXJ5 209 aa20.89■□□□□ 0.93
SSBP3-204ENST00000371320 COTL1Q14019 142 aa20.89■□□□□ 0.93
SSBP3-204ENST00000371320 CUBNO60494 3623 aa20.88■□□□□ 0.93
SSBP3-204ENST00000371320 IGKV2D-29A0A075B6S2 120 aaPredicted RBP20.88■□□□□ 0.93
SSBP3-204ENST00000371320 TRGV1A0A0A0MS02 117 aa20.88■□□□□ 0.93
SSBP3-204ENST00000371320 IGKV2-29A2NJV5 120 aaPredicted RBP20.88■□□□□ 0.93
SSBP3-204ENST00000371320 IL17DQ8TAD2 202 aa20.88■□□□□ 0.93
SSBP3-204ENST00000371320 UBE2D4Q9Y2X8 147 aa20.88■□□□□ 0.93
SSBP3-204ENST00000371320 ACANP16112 2415 aa20.87■□□□□ 0.93
SSBP3-204ENST00000371320 IGHV3-30P01768 117 aa20.87■□□□□ 0.93
SSBP3-204ENST00000371320 IGHV3-30-5P0DP03 117 aa20.87■□□□□ 0.93
SSBP3-204ENST00000371320 MRPS36P82909 103 aaKnown RBP20.87■□□□□ 0.93
SSBP3-204ENST00000371320 RNASE13Q5GAN3 156 aaKnown RBP20.87■□□□□ 0.93
SSBP3-204ENST00000371320 VPS25Q9BRG1 176 aa20.87■□□□□ 0.93
SSBP3-204ENST00000371320 CMC4P56277 68 aaPredicted RBP20.87■□□□□ 0.93
SSBP3-204ENST00000371320 ZNF418Q8TF45 676 aaPredicted RBP20.85■□□□□ 0.93
SSBP3-204ENST00000371320 APOMO95445 188 aa20.84■□□□□ 0.93
SSBP3-204ENST00000371320 H3BMG7 143 aa20.84■□□□□ 0.93
SSBP3-204ENST00000371320 SETD2Q9BYW2 2564 aaPredicted RBP20.83■□□□□ 0.93
SSBP3-204ENST00000371320 TMEM263Q8WUH6 116 aaKnown RBP20.82■□□□□ 0.92
SSBP3-204ENST00000371320 TIMM21Q9BVV7 248 aa20.82■□□□□ 0.92
SSBP3-204ENST00000371320 ANK3Q12955 4377 aaKnown RBP20.82■□□□□ 0.92
SSBP3-204ENST00000371320 F8W1H4 67 aa20.81■□□□□ 0.92
SSBP3-204ENST00000371320 IGHV3-30-3P0DP02 117 aa20.81■□□□□ 0.92
SSBP3-204ENST00000371320 HILS1P60008 231 aa20.81■□□□□ 0.92
SSBP3-204ENST00000371320 NDUFA11Q86Y39 141 aa20.81■□□□□ 0.92
SSBP3-204ENST00000371320 ITPR2Q14571 2701 aa20.8■□□□□ 0.92
SSBP3-204ENST00000371320 TINCRA0A1B0GVN0 87 aa20.8■□□□□ 0.92
SSBP3-204ENST00000371320 Q6ZTI0 123 aa20.8■□□□□ 0.92
SSBP3-204ENST00000371320 Q6ZUT4 128 aa20.8■□□□□ 0.92
SSBP3-204ENST00000371320 TSPAN13O95857 204 aa20.79■□□□□ 0.92
SSBP3-204ENST00000371320 IGLV1-51P01701 117 aa20.79■□□□□ 0.92
SSBP3-204ENST00000371320 MTORP42345 2549 aa20.79■□□□□ 0.92
SSBP3-204ENST00000371320 GCN1Q92616 2671 aaKnown RBP20.79■□□□□ 0.92
SSBP3-204ENST00000371320 G3V4G9 280 aa20.79■□□□□ 0.92
SSBP3-204ENST00000371320 GIG44P09565 113 aaPredicted RBP20.77■□□□□ 0.92
SSBP3-204ENST00000371320 CFC1BP0CG36 223 aa20.77■□□□□ 0.92
SSBP3-204ENST00000371320 CFC1P0CG37 223 aa20.77■□□□□ 0.92
SSBP3-204ENST00000371320 RPL24P83731 157 aaKnown RBP20.77■□□□□ 0.92
SSBP3-204ENST00000371320 WFDC10AQ9H1F0 79 aa20.77■□□□□ 0.92
SSBP3-204ENST00000371320 C10orf126Q8N4M7 172 aa20.77■□□□□ 0.92
SSBP3-204ENST00000371320 ADARB2-AS1A8MUL3 147 aa20.76■□□□□ 0.91
SSBP3-204ENST00000371320 TRAV8-3A0A0A6YYJ7 113 aa20.76■□□□□ 0.91
SSBP3-204ENST00000371320 WFDC2Q14508 124 aa20.76■□□□□ 0.91
SSBP3-204ENST00000371320 FAM110AQ9BQ89 295 aa20.76■□□□□ 0.91
SSBP3-204ENST00000371320 TRAV4A0A0B4J268 109 aa20.75■□□□□ 0.91
SSBP3-204ENST00000371320 IGHV1-58A0A0C4DH39 117 aa20.75■□□□□ 0.91
SSBP3-204ENST00000371320 GAGE13Q4V321 117 aa20.75■□□□□ 0.91
SSBP3-204ENST00000371320 NOP10Q9NPE3 64 aaKnown RBP20.75■□□□□ 0.91
SSBP3-204ENST00000371320 TMEM238C9JI98 176 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 K7EQD1 137 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 RPL35AP18077 110 aaKnown RBP20.74■□□□□ 0.91
SSBP3-204ENST00000371320 RPL36AP83881 106 aaKnown RBP20.74■□□□□ 0.91
SSBP3-204ENST00000371320 RPL36ALQ969Q0 106 aaKnown RBP20.74■□□□□ 0.91
SSBP3-204ENST00000371320 A0A0J9YXY3 114 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 TRBV10-1A0A0K0K1A3 114 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 NDUFA7O95182 113 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 PCP4P48539 62 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 DGAT2L7PQ6IED9 249 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 C19orf73Q9NVV2 129 aa20.74■□□□□ 0.91
SSBP3-204ENST00000371320 LOC107984156A0A0G2JMH3 177 aa20.73■□□□□ 0.91
SSBP3-204ENST00000371320 ARL17AQ8IVW1 177 aa20.73■□□□□ 0.91
SSBP3-204ENST00000371320 SFTA2Q6UW10 78 aa20.73■□□□□ 0.91
SSBP3-204ENST00000371320 GEMIN7Q9H840 131 aaKnown RBP20.73■□□□□ 0.91
SSBP3-204ENST00000371320 NIPBLQ6KC79 2804 aaeCLIP20.72■□□□□ 0.91
SSBP3-204ENST00000371320 UNC79Q9P2D8 2635 aa20.72■□□□□ 0.91
SSBP3-204ENST00000371320 DAZ2Q13117 558 aaKnown RBP20.72■□□□□ 0.91
SSBP3-204ENST00000371320 TEX48A0A1B0GUV7 120 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 214.8 ms