RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 KLK9Q2XQG4 91 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 KLK9Q9UKQ9 250 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 CACNA1AO00555 2505 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 TRBV7-7A0A0K0K1E9 115 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 RNF152Q8N8N0 203 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 USMG5Q96IX5 58 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 CUBNO60494 3623 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 SUMO4Q6EEV6 95 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 C10orf99Q6UWK7 81 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 PIMREGQ9BSJ6 248 aa11.86□□□□□ -0.51
SYNCRIP-202ENST00000369622 P0DMU3 169 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 FAM231AP0DMU4 169 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 FAM231CP0DMU5 169 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 LINC00526Q96FQ7 95 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 ITPR1Q14643 2758 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 SDHAF1A6NFY7 115 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 OXTP01178 125 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
SYNCRIP-202ENST00000369622 IGHG2P01859 326 aa11.84□□□□□ -0.51
SYNCRIP-202ENST00000369622 CSMD2Q7Z408 3487 aa11.84□□□□□ -0.51
SYNCRIP-202ENST00000369622 FAM208BQ5VWN6 2430 aa11.84□□□□□ -0.51
SYNCRIP-202ENST00000369622 AMELXQ99217 191 aa11.84□□□□□ -0.51
SYNCRIP-202ENST00000369622 CCL19Q99731 98 aa11.84□□□□□ -0.51
SYNCRIP-202ENST00000369622 ACACBO00763 2458 aa11.84□□□□□ -0.51
SYNCRIP-202ENST00000369622 FLNCQ14315 2725 aa11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 USP9XQ93008 2570 aaPredicted RBP11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 UTP20O75691 2785 aaKnown RBP11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 IGHV4-30-2A0A087WSY4 118 aa11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 TRAV13-1A0A0B4J241 112 aa11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 PPP1R17O96001 155 aa11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 RHOHQ15669 191 aa11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 ICOSQ9Y6W8 199 aa11.83□□□□□ -0.52
SYNCRIP-202ENST00000369622 MYO18BQ8IUG5 2567 aa11.82□□□□□ -0.52
SYNCRIP-202ENST00000369622 SPINK13Q1W4C9 94 aa11.82□□□□□ -0.52
SYNCRIP-202ENST00000369622 VCYO14598 125 aa11.81□□□□□ -0.52
SYNCRIP-202ENST00000369622 ZANQ9Y493 2812 aa11.81□□□□□ -0.52
SYNCRIP-202ENST00000369622 LINC00315P59091 139 aa11.81□□□□□ -0.52
SYNCRIP-202ENST00000369622 PKD1L2Q7Z442 2459 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 IGHV3-73A0A0B4J1V6 119 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 AVPP01185 164 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 A0A0B4J2C4 111 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 A6NDX4 124 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 COX7CP15954 63 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 DAND5Q8N907 189 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 MAPK1IP1LQ8NDC0 245 aa11.8□□□□□ -0.52
SYNCRIP-202ENST00000369622 WIPF1O43516 503 aa11.79□□□□□ -0.52
SYNCRIP-202ENST00000369622 FAM19A4Q96LR4 140 aa11.79□□□□□ -0.52
SYNCRIP-202ENST00000369622 KIF25-AS1Q9Y6Z4 181 aa11.79□□□□□ -0.52
SYNCRIP-202ENST00000369622 TMEM223A0PJW6 202 aa11.79□□□□□ -0.52
SYNCRIP-202ENST00000369622 MYO9AB2RTY4 2548 aa11.79□□□□□ -0.52
SYNCRIP-202ENST00000369622 IGIPA6NJ69 53 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 A8MZ25 164 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 KLLNB2CW77 178 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 TRACP01848 142 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 POLR2KP53803 58 aaKnown RBP11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 IGHV4-59P01825 116 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 MSMBP08118 114 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 COX6CP09669 75 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 MED14OSP0DP75 135 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 DCANP1Q8TF63 244 aa11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 PRRC2AP48634 2157 aaKnown RBP11.78□□□□□ -0.52
SYNCRIP-202ENST00000369622 TRBV30A0A0K0K1B3 111 aa11.77□□□□□ -0.52
SYNCRIP-202ENST00000369622 SYNJ2BPP57105 145 aa11.77□□□□□ -0.52
SYNCRIP-202ENST00000369622 C10orf105Q8TEF2 133 aa11.77□□□□□ -0.52
SYNCRIP-202ENST00000369622 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.77□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A1B0GX51 115 aa11.77□□□□□ -0.53
SYNCRIP-202ENST00000369622 I3L3M4 83 aa11.77□□□□□ -0.53
SYNCRIP-202ENST00000369622 DPH3Q96FX2 82 aa11.77□□□□□ -0.53
SYNCRIP-202ENST00000369622 TLN2Q9Y4G6 2542 aa11.77□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 ZNF876PQ49A33 203 aa11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 CFAP46Q8IYW2 2715 aa11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 H3BT86 120 aa11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 SNRPD3P62318 126 aaKnown RBP11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 ADAMTSL4-AS1Q5T5F5 129 aa11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
SYNCRIP-202ENST00000369622 IGHV4OR15-8A0A075B7B6 117 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A087WW49 117 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 H3BUA1 57 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 IGLV1-40P01703 118 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 PRM2P04554 102 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 IGKV3D-7A0A0C4DH55 119 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A0J9YXV3 536 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 PAPPA-AS1Q5QFB9 102 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 C2orf48Q96LS8 159 aa11.75□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A0J9YXY3 114 aa11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 APRG1Q8IVJ8 170 aa11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 PKIGQ9Y2B9 76 aa11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 A0A087WVE0 104 aa11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 FAM240AA0A1B0GVK7 77 aa11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 RNASE13Q5GAN3 156 aaKnown RBP11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 C2CD3Q4AC94 2353 aa11.74□□□□□ -0.53
SYNCRIP-202ENST00000369622 IGHV3-16A0A0C4DH30 117 aa11.73□□□□□ -0.53
SYNCRIP-202ENST00000369622 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
SYNCRIP-202ENST00000369622 DEFB112Q30KQ8 113 aa11.73□□□□□ -0.53
SYNCRIP-202ENST00000369622 TMEM141Q96I45 108 aa11.73□□□□□ -0.53
SYNCRIP-202ENST00000369622 C1orf43Q9BWL3 253 aa11.73□□□□□ -0.53
SYNCRIP-202ENST00000369622 ZFYVE26Q68DK2 2539 aa11.73□□□□□ -0.53
SYNCRIP-202ENST00000369622 LST1O00453 97 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms