RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 MORN5Q5VZ52 161 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 GTSCR1Q86UQ5 136 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 EDA2RQ9HAV5 297 aa5.14□□□□□ -1.59
CSDE1-204ENST00000369530 NDUFC2-KCTD14E9PQ53 114 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 EMP1P54849 157 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 MRPL51Q4U2R6 128 aaKnown RBP5.13□□□□□ -1.59
CSDE1-204ENST00000369530 Q8N8P6 123 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 SEC61GP60059 68 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 PATE2Q6UY27 113 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 TMEM75Q8N9X5 138 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 MRPL36Q9P0J6 103 aaKnown RBP5.13□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3OR16-13A0A075B7E8 117 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3-74A0A0B4J1X5 117 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 A0A0B4J2C4 111 aa5.13□□□□□ -1.59
CSDE1-204ENST00000369530 AGRNO00468 2067 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 CLPSL1A2RUU4 121 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 F8W735 103 aaPredicted RBP5.12□□□□□ -1.59
CSDE1-204ENST00000369530 K7EMI3 77 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 ELANEP08246 267 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 A8MZ25 164 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 CFC1BP0CG36 223 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 CFC1P0CG37 223 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 GP9P14770 177 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 TMEM14CQ9P0S9 112 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 H3BMM0 161 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 KRTAP10-11P60412 298 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 UBE2WQ96B02 151 aa5.12□□□□□ -1.59
CSDE1-204ENST00000369530 TINCRA0A1B0GVN0 87 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3-30P01768 117 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3-30-5P0DP03 117 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 GAGE2AQ6NT46 116 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 PLEKHB2Q96CS7 222 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 RNF185Q96GF1 192 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 OTORQ9NRC9 128 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3-49A0A0A0MS15 119 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 F8VRH5 84 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 MRPS12O15235 138 aaKnown RBP5.11□□□□□ -1.59
CSDE1-204ENST00000369530 GNG5P63218 68 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 NDPQ00604 133 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 LINC01620Q4KN68 170 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 LINC00482Q8N8I6 264 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 NTN5Q8WTR8 489 aaPredicted RBP5.11□□□□□ -1.59
CSDE1-204ENST00000369530 AAMDCQ9H7C9 122 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 JPT2Q9H910 190 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 IGKV1D-37A0A075B6S9 117 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 TRBV30A0A0K0K1B3 111 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 ATXN8Q156A1 80 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 LINC00643Q86TS7 51 aa5.11□□□□□ -1.59
CSDE1-204ENST00000369530 MRPL35Q9NZE8 188 aaKnown RBP5.11□□□□□ -1.59
CSDE1-204ENST00000369530 TRAV8-1A0A0A6YYK1 113 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 FAM236AA0A1B0GUQ0 79 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 FAM236BA0A1B0GV22 79 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3-33P01772 117 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 PRO1854Q9UHT4 67 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 IGKV3-7A0A075B6H7 116 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV3-66A0A0C4DH42 116 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 H7C1H1 209 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 RPL11P62913 178 aaKnown RBP5.1□□□□□ -1.59
CSDE1-204ENST00000369530 TMEM263Q8WUH6 116 aaKnown RBP5.1□□□□□ -1.59
CSDE1-204ENST00000369530 PYGO1Q9Y3Y4 419 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 C2CD3Q4AC94 2353 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 TRGV11A0A075B6L2 103 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 ATOX1O00244 68 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 RNF5Q99942 180 aa5.1□□□□□ -1.59
CSDE1-204ENST00000369530 LOC107984156A0A0G2JMH3 177 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 A0A0J9YY99 117 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 TEX22C9J3V5 150 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 G3V318 75 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 ARL17AQ8IVW1 177 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 SLC25A29Q8N8R3 303 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 SHANK2-AS3Q9BTD1 123 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 IGHV7-81A0A0B4J1V7 117 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 EIF4EBP3O60516 100 aaPredicted RBP5.09□□□□□ -1.59
CSDE1-204ENST00000369530 LEPP41159 167 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 CRIP1P50238 77 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 ZNF575Q86XF7 245 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 C9orf85Q96MD7 179 aa5.09□□□□□ -1.59
CSDE1-204ENST00000369530 KLK5Q9Y337 293 aaPredicted RBP5.09□□□□□ -1.6
CSDE1-204ENST00000369530 H3BUX3 64 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 TRACP01848 142 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 CEMP1Q6PRD7 247 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-204ENST00000369530 C10orf99Q6UWK7 81 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 CLEC19AQ6UXS0 136 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 PRNTQ86SH4 94 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 LYPD1Q8N2G4 141 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 NEXN-AS1Q8NBZ9 246 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 FAM19A4Q96LR4 140 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 METTL26Q96S19 204 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 TIMM8BQ9Y5J9 83 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-204ENST00000369530 MTORP42345 2549 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 ATP6V0E1O15342 81 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 IGHV3-11P01762 117 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 BLCAPP62952 87 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 C15orf32Q32M92 178 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 HRCT1Q6UXD1 115 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 GOLT1AQ6ZVE7 132 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 EXOC3-AS1Q8N2X6 119 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 AMELXQ99217 191 aa5.08□□□□□ -1.6
CSDE1-204ENST00000369530 WNK1Q9H4A3 2382 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 624.6 ms