RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 SPTSSBQ8NFR3 76 aa13.51□□□□□ -0.25
SNX27-203ENST00000368843 C20orf173Q96LM9 149 aa13.51□□□□□ -0.25
SNX27-203ENST00000368843 UFSP1Q6NVU6 142 aa13.51□□□□□ -0.25
SNX27-203ENST00000368843 LYPD6Q86Y78 171 aa13.51□□□□□ -0.25
SNX27-203ENST00000368843 BRK1Q8WUW1 75 aa13.5□□□□□ -0.25
SNX27-203ENST00000368843 Q6ZSV7 163 aa13.5□□□□□ -0.25
SNX27-203ENST00000368843 ZNF80P51504 273 aaPredicted RBP13.5□□□□□ -0.25
SNX27-203ENST00000368843 LINC00467Q9BRT7 94 aa13.5□□□□□ -0.25
SNX27-203ENST00000368843 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
SNX27-203ENST00000368843 DCANP1Q8TF63 244 aa13.49□□□□□ -0.25
SNX27-203ENST00000368843 KIAA1549Q9HCM3 1950 aa13.49□□□□□ -0.25
SNX27-203ENST00000368843 TRBV10-2A0A0K0K1G8 114 aa13.49□□□□□ -0.25
SNX27-203ENST00000368843 CACNA1HO95180 2353 aa13.49□□□□□ -0.25
SNX27-203ENST00000368843 FOXI1Q12951 378 aa13.48□□□□□ -0.25
SNX27-203ENST00000368843 ODF1Q14990 250 aa13.48□□□□□ -0.25
SNX27-203ENST00000368843 TANC2Q9HCD6 1990 aa13.48□□□□□ -0.25
SNX27-203ENST00000368843 IGF1P05019 195 aa13.48□□□□□ -0.25
SNX27-203ENST00000368843 C10orf99Q6UWK7 81 aa13.48□□□□□ -0.25
SNX27-203ENST00000368843 DSCAMO60469 2012 aa13.47□□□□□ -0.25
SNX27-203ENST00000368843 CASC2Q6XLA1 102 aa13.47□□□□□ -0.25
SNX27-203ENST00000368843 KIR2DL5BQ8NHK3 375 aa13.47□□□□□ -0.25
SNX27-203ENST00000368843 C7orf33Q8WU49 177 aa13.47□□□□□ -0.25
SNX27-203ENST00000368843 LY6G6CO95867 125 aa13.47□□□□□ -0.25
SNX27-203ENST00000368843 TECTAO75443 2155 aa13.46□□□□□ -0.25
SNX27-203ENST00000368843 ODF3Q96PU9 254 aa13.46□□□□□ -0.25
SNX27-203ENST00000368843 ATOX1O00244 68 aa13.46□□□□□ -0.25
SNX27-203ENST00000368843 MIAQ16674 131 aa13.46□□□□□ -0.25
SNX27-203ENST00000368843 C22orf34Q6ZV56 151 aa13.46□□□□□ -0.25
SNX27-203ENST00000368843 WFDC10BQ8IUB3 73 aa13.46□□□□□ -0.25
SNX27-203ENST00000368843 K7EQG2 157 aa13.46□□□□□ -0.26
SNX27-203ENST00000368843 MIFP14174 115 aa13.46□□□□□ -0.26
SNX27-203ENST00000368843 UBE2D1P51668 147 aa13.46□□□□□ -0.26
SNX27-203ENST00000368843 TP73-AS1Q9UF72 201 aa13.45□□□□□ -0.26
SNX27-203ENST00000368843 C19orf71A6NCJ1 209 aa13.45□□□□□ -0.26
SNX27-203ENST00000368843 TNCP24821 2201 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 MED13LQ71F56 2210 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 KIR2DL5BA0A0G2JN68 375 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 KIR2DL5BA0A0G2JPC4 375 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 KIR2DL5AQ8N109 375 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
SNX27-203ENST00000368843 NEXN-AS1Q8NBZ9 246 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 HIGD1BQ9P298 99 aa13.44□□□□□ -0.26
SNX27-203ENST00000368843 TRAV10A0A0B4J240 114 aa13.43□□□□□ -0.26
SNX27-203ENST00000368843 UPK3BQ9BT76 320 aa13.43□□□□□ -0.26
SNX27-203ENST00000368843 SDIM1Q6ZPB5 146 aa13.43□□□□□ -0.26
SNX27-203ENST00000368843 GDF5OSQ5U4N7 250 aa13.43□□□□□ -0.26
SNX27-203ENST00000368843 TEN1Q86WV5 123 aa13.42□□□□□ -0.26
SNX27-203ENST00000368843 FREM1Q5H8C1 2179 aa13.42□□□□□ -0.26
SNX27-203ENST00000368843 H7C423 109 aa13.41□□□□□ -0.26
SNX27-203ENST00000368843 CFAP126Q5VTH2 177 aa13.41□□□□□ -0.26
SNX27-203ENST00000368843 ALPK3Q96L96 1907 aa13.41□□□□□ -0.26
SNX27-203ENST00000368843 BPY2O14599 106 aa13.41□□□□□ -0.26
SNX27-203ENST00000368843 RNASE8Q8TDE3 154 aaKnown RBP13.41□□□□□ -0.26
SNX27-203ENST00000368843 A0A0J9YXY3 114 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 TAX1BP3O14907 124 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 TCL1BO95988 128 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 PPDPFQ9H3Y8 114 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 PROK1P58294 105 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 C18orf65Q6ZTR6 163 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 NDUFC2O95298 119 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 C1orf229Q6ZS94 237 aaPredicted RBP13.4□□□□□ -0.26
SNX27-203ENST00000368843 BBC3Q96PG8 261 aaPredicted RBP13.4□□□□□ -0.26
SNX27-203ENST00000368843 PCDH15Q96QU1 1955 aa13.4□□□□□ -0.26
SNX27-203ENST00000368843 C11orf71Q6IPW1 123 aa13.4□□□□□ -0.27
SNX27-203ENST00000368843 LINC00526Q96FQ7 95 aa13.39□□□□□ -0.27
SNX27-203ENST00000368843 SPANXCQ9NY87 97 aa13.39□□□□□ -0.27
SNX27-203ENST00000368843 TRBV6-8A0A0A6YYG3 113 aa13.39□□□□□ -0.27
SNX27-203ENST00000368843 LINC00322Q6ZN03 302 aaPredicted RBP13.39□□□□□ -0.27
SNX27-203ENST00000368843 ZNF702PQ9H963 129 aa13.39□□□□□ -0.27
SNX27-203ENST00000368843 XAGE1AQ9HD64 81 aa13.39□□□□□ -0.27
SNX27-203ENST00000368843 IGHV4-30-4P0DP06 118 aa13.39□□□□□ -0.27
SNX27-203ENST00000368843 DSCAML1Q8TD84 2053 aa13.38□□□□□ -0.27
SNX27-203ENST00000368843 MED12LQ86YW9 2145 aa13.38□□□□□ -0.27
SNX27-203ENST00000368843 WFDC10AQ9H1F0 79 aa13.38□□□□□ -0.27
SNX27-203ENST00000368843 ZFHX2Q9C0A1 2572 aaPredicted RBP13.38□□□□□ -0.27
SNX27-203ENST00000368843 PLA2G2AP14555 144 aa13.37□□□□□ -0.27
SNX27-203ENST00000368843 PDE6GP18545 87 aa13.37□□□□□ -0.27
SNX27-203ENST00000368843 MUC6Q6W4X9 2439 aa13.37□□□□□ -0.27
SNX27-203ENST00000368843 LINC00574Q9H8X3 128 aa13.36□□□□□ -0.27
SNX27-203ENST00000368843 UBE2D4Q9Y2X8 147 aa13.36□□□□□ -0.27
SNX27-203ENST00000368843 A0A0U1RQV1 116 aa13.36□□□□□ -0.27
SNX27-203ENST00000368843 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
SNX27-203ENST00000368843 SPINK6Q6UWN8 80 aa13.36□□□□□ -0.27
SNX27-203ENST00000368843 PIK3CD-AS1Q5SR53 167 aa13.36□□□□□ -0.27
SNX27-203ENST00000368843 CDKN2A-AS1Q9UH64 79 aa13.35□□□□□ -0.27
SNX27-203ENST00000368843 IGKV2-28A0A075B6P5 120 aa13.35□□□□□ -0.27
SNX27-203ENST00000368843 H3BT86 120 aa13.35□□□□□ -0.27
SNX27-203ENST00000368843 IGKV2D-28P01615 120 aa13.35□□□□□ -0.27
SNX27-203ENST00000368843 TEX49A0A1B0GTD5 131 aa13.35□□□□□ -0.27
SNX27-203ENST00000368843 KPRPQ5T749 579 aaPredicted RBP13.35□□□□□ -0.27
SNX27-203ENST00000368843 PRM2P04554 102 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 LY6LH3BQJ8 138 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 SYCNQ0VAF6 134 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 LINC01006Q8NI28 216 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 PSMG3-AS1Q96PY0 264 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 C3orf84H3BNL1 204 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 ENHOQ6UWT2 76 aa13.34□□□□□ -0.27
SNX27-203ENST00000368843 Q8N976 141 aa13.33□□□□□ -0.27
SNX27-203ENST00000368843 CLUHP3Q96NS8 147 aa13.33□□□□□ -0.28
SNX27-203ENST00000368843 J3KT08 172 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1121.2 ms