RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ICOSQ9Y6W8 199 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 I3L3M4 83 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 ID1P41134 155 aa12.9□□□□□ -0.34
CHTOP-203ENST00000368690 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
CHTOP-203ENST00000368690 NBPF19A0A087WUL8 3843 aa12.89□□□□□ -0.35
CHTOP-203ENST00000368690 H7C423 109 aa12.89□□□□□ -0.35
CHTOP-203ENST00000368690 IGHV3-30-3P0DP02 117 aa12.89□□□□□ -0.35
CHTOP-203ENST00000368690 RHPN1-AS1Q9BWJ2 59 aa12.89□□□□□ -0.35
CHTOP-203ENST00000368690 A0A0J9YXV3 536 aa12.88□□□□□ -0.35
CHTOP-203ENST00000368690 DEFB104AQ8WTQ1 72 aa12.88□□□□□ -0.35
CHTOP-203ENST00000368690 MRPS36P82909 103 aaKnown RBP12.88□□□□□ -0.35
CHTOP-203ENST00000368690 ZNF56Q15929 161 aa12.88□□□□□ -0.35
CHTOP-203ENST00000368690 TIMM21Q9BVV7 248 aa12.88□□□□□ -0.35
CHTOP-203ENST00000368690 GCN1Q92616 2671 aaKnown RBP12.87□□□□□ -0.35
CHTOP-203ENST00000368690 CSMD1Q96PZ7 3565 aa12.87□□□□□ -0.35
CHTOP-203ENST00000368690 FAM74A4Q5TZK3 123 aa12.87□□□□□ -0.35
CHTOP-203ENST00000368690 EDA2RQ9HAV5 297 aa12.87□□□□□ -0.35
CHTOP-203ENST00000368690 DAZ1Q9NQZ3 744 aaKnown RBP12.87□□□□□ -0.35
CHTOP-203ENST00000368690 NAV2Q8IVL1 2488 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 IGHV3-64A0A075B6Q5 118 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 TRAV12-3A0A0B4J271 114 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 TRBV7-7A0A0K0K1E9 115 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 K7EMT4 169 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 MIAQ16674 131 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 TMEM219Q86XT9 240 aa12.86□□□□□ -0.35
CHTOP-203ENST00000368690 BEX4Q9NWD9 120 aaPredicted RBP12.86□□□□□ -0.35
CHTOP-203ENST00000368690 IGHV1-58A0A0C4DH39 117 aa12.85□□□□□ -0.35
CHTOP-203ENST00000368690 LST1O00453 97 aa12.85□□□□□ -0.35
CHTOP-203ENST00000368690 YAE1D1Q9NRH1 226 aa12.85□□□□□ -0.35
CHTOP-203ENST00000368690 LINC00527Q9UJ94 153 aa12.85□□□□□ -0.35
CHTOP-203ENST00000368690 APCP25054 2843 aa12.85□□□□□ -0.35
CHTOP-203ENST00000368690 DSCR9P59020 149 aa12.84□□□□□ -0.35
CHTOP-203ENST00000368690 TIMM17BO60830 172 aa12.84□□□□□ -0.35
CHTOP-203ENST00000368690 DCANP1Q8TF63 244 aa12.84□□□□□ -0.35
CHTOP-203ENST00000368690 ABCA2Q9BZC7 2435 aa12.83□□□□□ -0.35
CHTOP-203ENST00000368690 CELSR1Q9NYQ6 3014 aa12.83□□□□□ -0.36
CHTOP-203ENST00000368690 IGHG2P01859 326 aa12.82□□□□□ -0.36
CHTOP-203ENST00000368690 DEFB113Q30KQ7 82 aa12.82□□□□□ -0.36
CHTOP-203ENST00000368690 SPXQ9BT56 116 aa12.82□□□□□ -0.36
CHTOP-203ENST00000368690 NDUFA12Q9UI09 145 aa12.82□□□□□ -0.36
CHTOP-203ENST00000368690 ZNF580Q9UK33 172 aa12.82□□□□□ -0.36
CHTOP-203ENST00000368690 IGKV3-7A0A075B6H7 116 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 PRSS2P07478 247 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 TMEM61Q8N0U2 210 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 MAPK1IP1LQ8NDC0 245 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 IMUPQ9GZP8 106 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 TINCRA0A1B0GVN0 87 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 ACYP1P07311 99 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 CD28P10747 220 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 ADAMTSL4-AS1Q5T5F5 129 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 FAM104AQ969W3 186 aa12.81□□□□□ -0.36
CHTOP-203ENST00000368690 VSIG2Q96IQ7 327 aa12.8□□□□□ -0.36
CHTOP-203ENST00000368690 IGHV3OR16-10A0A075B7F0 116 aa12.8□□□□□ -0.36
CHTOP-203ENST00000368690 IGHV3-11P01762 117 aa12.8□□□□□ -0.36
CHTOP-203ENST00000368690 RNF152Q8N8N0 203 aa12.8□□□□□ -0.36
CHTOP-203ENST00000368690 TMEM126AQ9H061 195 aa12.8□□□□□ -0.36
CHTOP-203ENST00000368690 MSMBP08118 114 aa12.79□□□□□ -0.36
CHTOP-203ENST00000368690 PRRC2AP48634 2157 aaKnown RBP12.79□□□□□ -0.36
CHTOP-203ENST00000368690 MEIG1Q5JSS6 88 aa12.79□□□□□ -0.36
CHTOP-203ENST00000368690 TRGV11A0A075B6L2 103 aa12.78□□□□□ -0.36
CHTOP-203ENST00000368690 SMIM20Q8N5G0 67 aa12.78□□□□□ -0.36
CHTOP-203ENST00000368690 TRAV8-3A0A0A6YYJ7 113 aa12.77□□□□□ -0.36
CHTOP-203ENST00000368690 ADARB2-AS1A8MUL3 147 aa12.77□□□□□ -0.36
CHTOP-203ENST00000368690 B4DSR2 109 aa12.77□□□□□ -0.36
CHTOP-203ENST00000368690 IGLV1-40P01703 118 aa12.77□□□□□ -0.36
CHTOP-203ENST00000368690 TMEM101Q96IK0 257 aa12.77□□□□□ -0.36
CHTOP-203ENST00000368690 PF4V1P10720 104 aa12.77□□□□□ -0.37
CHTOP-203ENST00000368690 CFAP161Q6P656 301 aa12.77□□□□□ -0.37
CHTOP-203ENST00000368690 CLEC2BQ92478 149 aa12.77□□□□□ -0.37
CHTOP-203ENST00000368690 FASNP49327 2511 aaKnown RBP12.76□□□□□ -0.37
CHTOP-203ENST00000368690 HERV-K104P63124 156 aa12.76□□□□□ -0.37
CHTOP-203ENST00000368690 BRD3OSQ6XYD6 125 aa12.75□□□□□ -0.37
CHTOP-203ENST00000368690 Q96MF0 132 aa12.75□□□□□ -0.37
CHTOP-203ENST00000368690 DUX3Q96PT4 197 aa12.75□□□□□ -0.37
CHTOP-203ENST00000368690 ZFHX3Q15911 3703 aa12.75□□□□□ -0.37
CHTOP-203ENST00000368690 SNRPD3P62318 126 aaKnown RBP12.74□□□□□ -0.37
CHTOP-203ENST00000368690 LRRC75A-AS1Q8N1F1 130 aa12.74□□□□□ -0.37
CHTOP-203ENST00000368690 ZANQ9Y493 2812 aa12.74□□□□□ -0.37
CHTOP-203ENST00000368690 A6NDX4 124 aa12.73□□□□□ -0.37
CHTOP-203ENST00000368690 CCDC168Q8NDH2 2452 aa12.73□□□□□ -0.37
CHTOP-203ENST00000368690 TRAV12-2A0A075B6T6 113 aa12.73□□□□□ -0.37
CHTOP-203ENST00000368690 LINC01356Q8N9X3 169 aa12.73□□□□□ -0.37
CHTOP-203ENST00000368690 HECTD1Q9ULT8 2610 aa12.72□□□□□ -0.37
CHTOP-203ENST00000368690 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.72□□□□□ -0.372e-13■■■■□ 21.6
CHTOP-203ENST00000368690 NDUFA1O15239 70 aa12.72□□□□□ -0.37
CHTOP-203ENST00000368690 CFHR3Q02985 330 aa12.72□□□□□ -0.37
CHTOP-203ENST00000368690 PIK3CD-AS1Q5SR53 167 aa12.72□□□□□ -0.37
CHTOP-203ENST00000368690 LINC01587Q99440 93 aa12.72□□□□□ -0.37
CHTOP-203ENST00000368690 K7EQG2 157 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 IGHV4-38-2P0DP08 117 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 SHISA2Q6UWI4 295 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 ITPR2Q14571 2701 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 A0A096LNT2 108 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 CHCHD5Q9BSY4 110 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 UBE2D4Q9Y2X8 147 aa12.71□□□□□ -0.37
CHTOP-203ENST00000368690 UNC79Q9P2D8 2635 aa12.71□□□□□ -0.38
CHTOP-203ENST00000368690 IGLV5-45A0A087WSX0 123 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 TIRAPP58753 221 aa12.7□□□□□ -0.38
CHTOP-203ENST00000368690 Q6ZSV7 163 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms