RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 Q6YL49 198 aa10.9□□□□□ -0.67
PRKN-204ENST00000366896 A0A087WWL8 130 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 EIF4EBP3O60516 100 aaPredicted RBP10.89□□□□□ -0.67
PRKN-204ENST00000366896 IGHV3-33P01772 117 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 IGHV4-59P01825 116 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 SUMO4Q6EEV6 95 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 A4D1N5 150 aa10.89□□□□□ -0.67
PRKN-204ENST00000366896 NHLRC4P0CG21 123 aaPredicted RBP10.89□□□□□ -0.67
PRKN-204ENST00000366896 TMEM263Q8WUH6 116 aaKnown RBP10.89□□□□□ -0.67
PRKN-204ENST00000366896 RHODO00212 210 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 LGALS3P17931 250 aaKnown RBP10.88□□□□□ -0.67
PRKN-204ENST00000366896 TRPT1Q86TN4 253 aaKnown RBP10.88□□□□□ -0.67
PRKN-204ENST00000366896 RAX2Q96IS3 184 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 SS18L2Q9UHA2 77 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 TRAV12-3A0A0B4J271 114 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 P0DMU3 169 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 FAM231AP0DMU4 169 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 FAM231CP0DMU5 169 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 MXRA5Q9NR99 2828 aa10.88□□□□□ -0.67
PRKN-204ENST00000366896 HIVEP2P31629 2446 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 A0A0B4J2C4 111 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 PSMB8P28062 276 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 RNF152Q8N8N0 203 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 C10orf99Q6UWK7 81 aa10.87□□□□□ -0.67
PRKN-204ENST00000366896 LINC01600Q96MT4 127 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 IGHV3-16A0A0C4DH30 117 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 SDHAF1A6NFY7 115 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 RHOHQ15669 191 aa10.86□□□□□ -0.67
PRKN-204ENST00000366896 LEPROTO15243 131 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 IGKV3-20P01619 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 GAGE2BQ13066 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 GAGE2EQ4V326 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 GAGE2DQ9UEU5 116 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 VPREB3Q9UKI3 123 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 TRAV12-2A0A075B6T6 113 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 A0A0J9YX75 114 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 TMEM223A0PJW6 202 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 INAFM1C9JVW0 142 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 F5H697 171 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 SNCGO76070 127 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 NSUN5P1Q3KNT7 163 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 Q8N1Y9 231 aa10.85□□□□□ -0.67
PRKN-204ENST00000366896 TRAV4A0A0B4J268 109 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 B5MCH6 92 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 NDUFV3P56181 108 aaKnown RBP10.84□□□□□ -0.67
PRKN-204ENST00000366896 NTN5Q8WTR8 489 aaPredicted RBP10.84□□□□□ -0.67
PRKN-204ENST00000366896 F8P00451 2351 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 SNRPD3P62318 126 aaKnown RBP10.84□□□□□ -0.67
PRKN-204ENST00000366896 FAM74A4Q5TZK3 123 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 MUSTN1Q8IVN3 82 aa10.84□□□□□ -0.67
PRKN-204ENST00000366896 TRAV2A0A0B4J234 112 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 K7EQG2 157 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 CRLF1O75462 422 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 ATXN8Q156A1 80 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 LINC01620Q4KN68 170 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 MDFICQ9P1T7 246 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 MTORP42345 2549 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 M0QY20 66 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 ELANEP08246 267 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 RPL13AP40429 203 aaKnown RBP10.83□□□□□ -0.68
PRKN-204ENST00000366896 Q6Q795 121 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 TMEM86BQ8N661 226 aa10.83□□□□□ -0.68
PRKN-204ENST00000366896 ZNF256Q9Y2P7 627 aaPredicted RBP10.83□□□□□ -0.68
PRKN-204ENST00000366896 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.82□□□□□ -0.68
PRKN-204ENST00000366896 H7C2G1 150 aa10.82□□□□□ -0.68
PRKN-204ENST00000366896 EDA2RQ9HAV5 297 aa10.82□□□□□ -0.68
PRKN-204ENST00000366896 DUX5Q96PT3 197 aa10.82□□□□□ -0.68
PRKN-204ENST00000366896 IGHV1OR15-1A0A075B7D0 117 aa10.81□□□□□ -0.68
PRKN-204ENST00000366896 DNAJC9-AS1A6NH13 148 aa10.81□□□□□ -0.68
PRKN-204ENST00000366896 ESM1Q9NQ30 184 aa10.81□□□□□ -0.68
PRKN-204ENST00000366896 M0R2P5 195 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 ZNF22P17026 224 aaPredicted RBP10.8□□□□□ -0.68
PRKN-204ENST00000366896 OPRPNQ99935 248 aaPredicted RBP10.8□□□□□ -0.68
PRKN-204ENST00000366896 NSD1Q96L73 2696 aaPredicted RBP10.8□□□□□ -0.68
PRKN-204ENST00000366896 TRBV30A0A0K0K1B3 111 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 TRBV10-2A0A0K0K1G8 114 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12JA6NER3 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE7O76087 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 IFITM1P13164 125 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 GAGE4Q13068 117 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 ZNF56Q15929 161 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 Q1RN00 199 aa10.8□□□□□ -0.68
PRKN-204ENST00000366896 FN1P02751 2386 aaKnown RBP10.79□□□□□ -0.68
PRKN-204ENST00000366896 TEX49A0A1B0GTD5 131 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 SPINK13Q1W4C9 94 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 TTC32Q5I0X7 151 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
PRKN-204ENST00000366896 TRGV11A0A075B6L2 103 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 C20orf203Q8NBC4 194 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 IGHV3-64A0A075B6Q5 118 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 A0A0J9YXY3 114 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 CCDC179H3BU77 68 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 TRIAP1O43715 76 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 HILS1P60008 231 aa10.78□□□□□ -0.68
PRKN-204ENST00000366896 H3BMM0 161 aa10.77□□□□□ -0.69
PRKN-204ENST00000366896 I3L3M4 83 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms