RNA–Protein interactions for RNA: ENST00000361198.9

LDB1-201, Transcript of LIM domain binding 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDB1, Length 2,285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-201ENST00000361198 ZNRF2Q8NHG8 242 aa16.47■□□□□ 0.23
LDB1-201ENST00000361198 SRSF9Q13242 221 aaKnown RBP eCLIP16.46■□□□□ 0.23
LDB1-201ENST00000361198 SETXQ7Z333 2677 aaKnown RBP16.46■□□□□ 0.23
LDB1-201ENST00000361198 NACAE9PAV3 2078 aa16.46■□□□□ 0.23
LDB1-201ENST00000361198 IGHV3-73A0A0B4J1V6 119 aa16.45■□□□□ 0.22
LDB1-201ENST00000361198 PRO0461Q9UI25 63 aa16.45■□□□□ 0.22
LDB1-201ENST00000361198 M0R2P5 195 aa16.45■□□□□ 0.22
LDB1-201ENST00000361198 JMJD1CQ15652 2540 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 INSP01308 110 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 ZNF415Q09FC8 603 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 NFE4Q86UQ8 179 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 PGPEP1Q9NXJ5 209 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 P0DMU3 169 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 FAM231AP0DMU4 169 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 FAM231CP0DMU5 169 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 PROK1P58294 105 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 C11orf72Q8NBR9 251 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 XCL2Q9UBD3 114 aa16.44■□□□□ 0.22
LDB1-201ENST00000361198 GAGE13Q4V321 117 aa16.43■□□□□ 0.22
LDB1-201ENST00000361198 TMEM170BQ5T4T1 132 aa16.43■□□□□ 0.22
LDB1-201ENST00000361198 STHQ8IWL8 128 aa16.43■□□□□ 0.22
LDB1-201ENST00000361198 CLUHP3Q96NS8 147 aa16.43■□□□□ 0.22
LDB1-201ENST00000361198 TSPEAR-AS2P59090 65 aa16.43■□□□□ 0.22
LDB1-201ENST00000361198 AMELXQ99217 191 aa16.42■□□□□ 0.22
LDB1-201ENST00000361198 LINC00467Q9BRT7 94 aa16.42■□□□□ 0.22
LDB1-201ENST00000361198 SLC25A29Q8N8R3 303 aa16.42■□□□□ 0.22
LDB1-201ENST00000361198 C20orf203Q8NBC4 194 aa16.42■□□□□ 0.22
LDB1-201ENST00000361198 MRPL16Q9NX20 251 aaKnown RBP16.42■□□□□ 0.22
LDB1-201ENST00000361198 NOTCH3Q9UM47 2321 aa16.41■□□□□ 0.22
LDB1-201ENST00000361198 A8MWV9 139 aa16.4■□□□□ 0.22
LDB1-201ENST00000361198 EDA2RQ9HAV5 297 aa16.4■□□□□ 0.22
LDB1-201ENST00000361198 I3L3M4 83 aa16.4■□□□□ 0.22
LDB1-201ENST00000361198 ADARB2-AS1A8MUL3 147 aa16.39■□□□□ 0.21
LDB1-201ENST00000361198 PIK3CD-AS1Q5SR53 167 aa16.39■□□□□ 0.21
LDB1-201ENST00000361198 J3QQQ9 107 aa16.39■□□□□ 0.21
LDB1-201ENST00000361198 IGHV3-30P01768 117 aa16.39■□□□□ 0.21
LDB1-201ENST00000361198 IGHV3-30-5P0DP03 117 aa16.39■□□□□ 0.21
LDB1-201ENST00000361198 ETDBQ3ZM63 59 aa16.39■□□□□ 0.21
LDB1-201ENST00000361198 AZU1P20160 251 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 CFAP126Q5VTH2 177 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 PTH2Q96A98 100 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 OPRPNQ99935 248 aaPredicted RBP16.38■□□□□ 0.21
LDB1-201ENST00000361198 TSPAN13O95857 204 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 SH2D6Q7Z4S9 175 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 NDUFA11Q86Y39 141 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 C1orf158Q8N1D5 194 aa16.38■□□□□ 0.21
LDB1-201ENST00000361198 J3QR89 54 aa16.37■□□□□ 0.21
LDB1-201ENST00000361198 NDUFA7O95182 113 aa16.37■□□□□ 0.21
LDB1-201ENST00000361198 Q6ZSN1 163 aa16.37■□□□□ 0.21
LDB1-201ENST00000361198 Q9UF83 564 aa16.37■□□□□ 0.21
LDB1-201ENST00000361198 IGHV3OR16-12A0A075B7B8 117 aa16.36■□□□□ 0.21
LDB1-201ENST00000361198 TMEM223A0PJW6 202 aa16.36■□□□□ 0.21
LDB1-201ENST00000361198 UBE2D3P61077 147 aa16.36■□□□□ 0.21
LDB1-201ENST00000361198 UBE2D2P62837 147 aa16.36■□□□□ 0.21
LDB1-201ENST00000361198 SPXQ9BT56 116 aa16.36■□□□□ 0.21
LDB1-201ENST00000361198 OTOGQ6ZRI0 2925 aa16.36■□□□□ 0.21
LDB1-201ENST00000361198 LY6G6DO95868 133 aa16.35■□□□□ 0.21
LDB1-201ENST00000361198 LEPROTO15243 131 aa16.35■□□□□ 0.21
LDB1-201ENST00000361198 IGLV1-51P01701 117 aa16.34■□□□□ 0.21
LDB1-201ENST00000361198 LGALS3P17931 250 aaKnown RBP16.34■□□□□ 0.21
LDB1-201ENST00000361198 BEAN1Q3B7T3 259 aa16.34■□□□□ 0.21
LDB1-201ENST00000361198 IGLV4-3A0A075B6K6 122 aa16.34■□□□□ 0.21
LDB1-201ENST00000361198 APOMO95445 188 aa16.34■□□□□ 0.21
LDB1-201ENST00000361198 CFC1BP0CG36 223 aa16.33■□□□□ 0.2
LDB1-201ENST00000361198 CFC1P0CG37 223 aa16.33■□□□□ 0.2
LDB1-201ENST00000361198 MTURNQ8N3F0 131 aa16.33■□□□□ 0.2
LDB1-201ENST00000361198 ZNF22P17026 224 aaPredicted RBP16.33■□□□□ 0.2
LDB1-201ENST00000361198 WFDC10AQ9H1F0 79 aa16.33■□□□□ 0.2
LDB1-201ENST00000361198 PYGO1Q9Y3Y4 419 aa16.33■□□□□ 0.2
LDB1-201ENST00000361198 TNFRSF18Q9Y5U5 241 aa16.33■□□□□ 0.2
LDB1-201ENST00000361198 RHODO00212 210 aa16.32■□□□□ 0.2
LDB1-201ENST00000361198 VCX2Q9H322 139 aa16.31■□□□□ 0.2
LDB1-201ENST00000361198 LYRM7Q5U5X0 104 aa16.31■□□□□ 0.2
LDB1-201ENST00000361198 KRTAP10-3P60369 221 aa16.3■□□□□ 0.2
LDB1-201ENST00000361198 C10orf126Q8N4M7 172 aa16.3■□□□□ 0.2
LDB1-201ENST00000361198 RS1O15537 224 aa16.3■□□□□ 0.2
LDB1-201ENST00000361198 SMCPP49901 116 aaPredicted RBP16.3■□□□□ 0.2
LDB1-201ENST00000361198 LOC107984156A0A0G2JMH3 177 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 IGHV3-53P01767 116 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 CRYBA4P53673 196 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 ARL17AQ8IVW1 177 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 FAM104AQ969W3 186 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 C19orf73Q9NVV2 129 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 A0A0J9YXV3 536 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 GAGE12HA6NDE8 117 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 IL17DQ8TAD2 202 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 SPATA25Q9BR10 227 aa16.29■□□□□ 0.2
LDB1-201ENST00000361198 GIG44P09565 113 aaPredicted RBP16.28■□□□□ 0.2
LDB1-201ENST00000361198 CMC4P56277 68 aaPredicted RBP16.28■□□□□ 0.2
LDB1-201ENST00000361198 ATP6V0E2Q8NHE4 81 aa16.28■□□□□ 0.2
LDB1-201ENST00000361198 FN1P02751 2386 aaKnown RBP16.28■□□□□ 0.2
LDB1-201ENST00000361198 TMEM238C9JI98 176 aa16.28■□□□□ 0.2
LDB1-201ENST00000361198 PSMB2P49721 201 aa16.27■□□□□ 0.2
LDB1-201ENST00000361198 PRO1854Q9UHT4 67 aa16.27■□□□□ 0.2
LDB1-201ENST00000361198 SIGMAR1Q99720 223 aa16.26■□□□□ 0.19
LDB1-201ENST00000361198 C2CD3Q4AC94 2353 aa16.26■□□□□ 0.19
LDB1-201ENST00000361198 TRBV20-1A0A075B6N2 111 aa16.26■□□□□ 0.19
LDB1-201ENST00000361198 TRGV1A0A0A0MS02 117 aa16.26■□□□□ 0.19
LDB1-201ENST00000361198 INSL3P51460 131 aa16.26■□□□□ 0.19
LDB1-201ENST00000361198 SFTA2Q6UW10 78 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms