RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 CNEP1R1Q8N9A8 125 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 ARFGEF3Q5TH69 2177 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 TRAV41A0A0B4J266 112 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 A0A0J9YXV3 536 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 NANOS2P60321 138 aaKnown RBP3.18□□□□□ -1.9
PTPN22-201ENST00000359785 NPC2P61916 151 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 FHL2Q14192 279 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 WFDC3Q8IUB2 231 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 CDC42SE2Q9NRR3 84 aa3.18□□□□□ -1.9
PTPN22-201ENST00000359785 TRAV13-1A0A0B4J241 112 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 FAM236DA0A1B0GTK5 79 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 BAALC-AS2P0C853 105 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 FAM236CP0DP71 79 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 ATP5J2P56134 94 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 SPATA3Q8NHX4 192 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 BSNQ9UPA5 3926 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 TMSB15BA0A087X1C1 80 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 A0A1B0GUV1 79 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 TMEM256-PLSCR3K7ERE1 68 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 ZNHIT1O43257 154 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 CNIH1O95406 144 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV4-30-4P0DP06 118 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 FP248Q71RG6 208 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-201ENST00000359785 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.17□□□□□ -1.9
PTPN22-201ENST00000359785 C16orf92Q96LL3 132 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 OTOGLQ3ZCN5 2332 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 ZGRF1Q86YA3 2104 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 PRSS2P07478 247 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 Q8IZM0 81 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 AKAP9Q99996 3911 aa3.17□□□□□ -1.9
PTPN22-201ENST00000359785 CCL21O00585 134 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV3-48P01763 117 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 CLEC2BQ92478 149 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 LINC00846Q9NV44 126 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 A0A0U1RQV1 116 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
PTPN22-201ENST00000359785 GOLGB1Q14789 3259 aaKnown RBP3.16□□□□□ -1.9
PTPN22-201ENST00000359785 ZNF561-AS1K7EIQ3 104 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 TGFAP01135 160 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 XCL1P47992 114 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 LINC00337Q8N6G1 96 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 XCL2Q9UBD3 114 aa3.16□□□□□ -1.9
PTPN22-201ENST00000359785 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 IGHV3OR16-9A0A0B4J2B5 98 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 CCL24O00175 119 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 VPREB1P12018 145 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 C10orf105Q8TEF2 133 aa3.15□□□□□ -1.9
PTPN22-201ENST00000359785 OPRPNQ99935 248 aaPredicted RBP3.15□□□□□ -1.9
PTPN22-201ENST00000359785 A0A096LNT2 108 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-21A0A0B4J1V1 117 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 GNRH2O43555 120 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 CD28P10747 220 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 GHRHP01286 108 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 IGLV6-57P01721 117 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-11P01762 117 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 SPINK2P20155 84 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 FAM27E3Q08E93 113 aa3.15□□□□□ -1.91
PTPN22-201ENST00000359785 INTS1Q8N201 2190 aaKnown RBP3.15□□□□□ -1.91
PTPN22-201ENST00000359785 CMC4P56277 68 aaPredicted RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 ASB16-AS1Q495Z4 193 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 Q8N814 137 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 ORMDL1Q9P0S3 153 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 TRAV12-3A0A0B4J271 114 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 PLAC8L1A1L4L8 177 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RBMY1A1P0DJD3 496 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RBMY1CP0DJD4 496 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RPL11P62913 178 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 RBMY1FQ15415 496 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 OCR1Q9BZK8 76 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 AVPP01185 164 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV4-39P01824 125 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 PFN2P35080 140 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 UNQ9165/PRO28630Q6UXU0 137 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 Q6ZTC4 211 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 CDKN2A-AS1Q9UH64 79 aa3.14□□□□□ -1.91
PTPN22-201ENST00000359785 PRRC2AP48634 2157 aaKnown RBP3.14□□□□□ -1.91
PTPN22-201ENST00000359785 SPENQ96T58 3664 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 A0A0J9YWU9 116 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 SYNJ2BPP57105 145 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 ELOF1P60002 83 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 SMIM11BQ8TCY0 68 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 PRKDCP78527 4128 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 DIDO1Q9BTC0 2240 aaKnown RBP3.13□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-72A0A0B4J1Y9 119 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 IGHV3-66A0A0C4DH42 116 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 TRBV12-3P01733 135 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 BLCAPP62952 87 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 CLEC19AQ6UXS0 136 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 UBE2E2Q96LR5 201 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 PLA2G2DQ9UNK4 145 aa3.13□□□□□ -1.91
PTPN22-201ENST00000359785 SZT2Q5T011 3432 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 DNAL4O96015 105 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 CRPP02741 224 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 S100A4P26447 101 aaKnown RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 ZFP36P26651 326 aaKnown RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 LINC01547P58512 204 aaPredicted RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 SNRPD3P62318 126 aaKnown RBP3.12□□□□□ -1.91
PTPN22-201ENST00000359785 COX6A2Q02221 97 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 C6orf226Q5I0X4 101 aa3.12□□□□□ -1.91
PTPN22-201ENST00000359785 LINC00575Q6W349 94 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms