RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 DAZ1Q9NQZ3 744 aaKnown RBP8.6□□□□□ -1.03
CNOT3-202ENST00000358389 ACANP16112 2415 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 IGHV7-81A0A0B4J1V7 117 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 DEFB131AP59861 70 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 GPHB5Q86YW7 130 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 NPBQ8NG41 125 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 C20orf173Q96LM9 149 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 IGHV3-16A0A0C4DH30 117 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 RNF223E7ERA6 249 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 J3KT08 172 aa8.6□□□□□ -1.03
CNOT3-202ENST00000358389 TNRC18O15417 2968 aaPredicted RBP8.59□□□□□ -1.03
CNOT3-202ENST00000358389 PRRC2AP48634 2157 aaKnown RBP8.59□□□□□ -1.03
CNOT3-202ENST00000358389 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 TRAV13-1A0A0B4J241 112 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 TMEM223A0PJW6 202 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 A8MZ25 164 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 DNAJC30Q96LL9 226 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 ZFAND3Q9H8U3 227 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 CSMD1Q96PZ7 3565 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 I3L3M4 83 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
CNOT3-202ENST00000358389 FAM110DQ8TAY7 271 aaPredicted RBP8.59□□□□□ -1.03
CNOT3-202ENST00000358389 LY6LH3BQJ8 138 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 IGF2-ASQ6U949 168 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 ZFAND2AQ8N6M9 145 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 TRGV4A0A0C4DH28 118 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
CNOT3-202ENST00000358389 NRGNQ92686 78 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 CLPSL1A2RUU4 121 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 EPG5Q9HCE0 2579 aa8.58□□□□□ -1.04
CNOT3-202ENST00000358389 UQCRQO14949 82 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 XCL2Q9UBD3 114 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 PEMTQ9UBM1 199 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 SMIM9A6NGZ8 99 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 hADV29S1A0JD25 119 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 PRB1P04280 392 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 RNASE3P12724 160 aaKnown RBP8.57□□□□□ -1.04
CNOT3-202ENST00000358389 AMELXQ99217 191 aa8.57□□□□□ -1.04
CNOT3-202ENST00000358389 RHOHQ15669 191 aa8.56□□□□□ -1.04
CNOT3-202ENST00000358389 IGHV3-38A0A0C4DH36 116 aa8.56□□□□□ -1.04
CNOT3-202ENST00000358389 RPL35AP18077 110 aaKnown RBP8.56□□□□□ -1.04
CNOT3-202ENST00000358389 POLR2KP53803 58 aaKnown RBP8.56□□□□□ -1.04
CNOT3-202ENST00000358389 IGFL2Q6UWQ7 119 aa8.56□□□□□ -1.04
CNOT3-202ENST00000358389 CCDC140Q96MF4 163 aa8.56□□□□□ -1.04
CNOT3-202ENST00000358389 NSUN5P1Q3KNT7 163 aa8.56□□□□□ -1.04
CNOT3-202ENST00000358389 ADAMTSL4-AS1Q5T5F5 129 aa8.56□□□□□ -1.04
CNOT3-202ENST00000358389 MRPL53Q96EL3 112 aaKnown RBP8.56□□□□□ -1.04
CNOT3-202ENST00000358389 USMG5Q96IX5 58 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 LST1O00453 97 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 LINC01356Q8N9X3 169 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 ATMQ13315 3056 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 BSNQ9UPA5 3926 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 IGHV1-69P01742 117 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 MSMBP08118 114 aa8.55□□□□□ -1.04
CNOT3-202ENST00000358389 LINC00158P58513 81 aa8.54□□□□□ -1.04
CNOT3-202ENST00000358389 TRACP01848 142 aa8.54□□□□□ -1.04
CNOT3-202ENST00000358389 CFHR3Q02985 330 aa8.54□□□□□ -1.04
CNOT3-202ENST00000358389 LINC00643Q86TS7 51 aa8.54□□□□□ -1.04
CNOT3-202ENST00000358389 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
CNOT3-202ENST00000358389 BLCAPP62952 87 aa8.54□□□□□ -1.04
CNOT3-202ENST00000358389 TRBV7-7A0A0K0K1E9 115 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 Q8N9W7 124 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 LY6G5BQ8NDX9 201 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 CENPEQ02224 2701 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 IGKV3D-7A0A0C4DH55 119 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 FAM240AA0A1B0GVK7 77 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 FAM223BA6NKX1 122 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 FAM223AQ8IWN6 122 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 ACYP1P07311 99 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 UNQ9165/PRO28630Q6UXU0 137 aa8.53□□□□□ -1.04
CNOT3-202ENST00000358389 DAZ2Q13117 558 aaKnown RBP8.52□□□□□ -1.04
CNOT3-202ENST00000358389 DAZ4Q86SG3 579 aaKnown RBP8.52□□□□□ -1.04
CNOT3-202ENST00000358389 COPS9Q8WXC6 57 aa8.52□□□□□ -1.04
CNOT3-202ENST00000358389 Q96MF0 132 aa8.52□□□□□ -1.04
CNOT3-202ENST00000358389 DAZ3Q9NR90 486 aaKnown RBP8.52□□□□□ -1.04
CNOT3-202ENST00000358389 DEFB130BP0DP73 79 aa8.52□□□□□ -1.05
CNOT3-202ENST00000358389 DEFB130AP0DP74 79 aa8.52□□□□□ -1.05
CNOT3-202ENST00000358389 HOXD3P31249 432 aaPredicted RBP8.52□□□□□ -1.05
CNOT3-202ENST00000358389 PRIMA1Q86XR5 153 aa8.52□□□□□ -1.05
CNOT3-202ENST00000358389 C20orf203Q8NBC4 194 aa8.52□□□□□ -1.05
CNOT3-202ENST00000358389 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
CNOT3-202ENST00000358389 RPL36AP83881 106 aaKnown RBP8.52□□□□□ -1.05
CNOT3-202ENST00000358389 MIAQ16674 131 aa8.52□□□□□ -1.05
CNOT3-202ENST00000358389 RPL36ALQ969Q0 106 aaKnown RBP8.52□□□□□ -1.05
CNOT3-202ENST00000358389 IGHV4OR15-8A0A075B7B6 117 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 A0A087WW49 117 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 A0A1B0GX51 115 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 PAX4O43316 350 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 NXPH4O95158 308 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 SDIM1Q6ZPB5 146 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 TMEM61Q8N0U2 210 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 TRBV12-3P01733 135 aa8.51□□□□□ -1.05
CNOT3-202ENST00000358389 MUC4Q99102 2169 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 TRBV27A0A0K0K1C4 114 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 DEFB136Q30KP8 78 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 COX7CP15954 63 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
CNOT3-202ENST00000358389 IMUPQ9GZP8 106 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms