RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 GAGE4Q13068 117 aa11.99□□□□□ -0.49
TPM1-205ENST00000357980 GAGE5Q13069 117 aa11.99□□□□□ -0.49
TPM1-205ENST00000357980 GAGE13Q4V321 117 aa11.99□□□□□ -0.49
TPM1-205ENST00000357980 MRAPQ8TCY5 172 aa11.99□□□□□ -0.49
TPM1-205ENST00000357980 PHLDA1Q8WV24 401 aaPredicted RBP11.99□□□□□ -0.49
TPM1-205ENST00000357980 PRO0255Q9UI72 69 aa11.99□□□□□ -0.49
TPM1-205ENST00000357980 G0S2P27469 103 aa11.98□□□□□ -0.49
TPM1-205ENST00000357980 C12orf74Q32Q52 190 aa11.98□□□□□ -0.49
TPM1-205ENST00000357980 DAZ4Q86SG3 579 aaKnown RBP11.98□□□□□ -0.49
TPM1-205ENST00000357980 DAZ3Q9NR90 486 aaKnown RBP11.98□□□□□ -0.49
TPM1-205ENST00000357980 CYSLTR1Q9Y271 337 aa11.98□□□□□ -0.49
TPM1-205ENST00000357980 A0A0J9YWU9 116 aa11.97□□□□□ -0.49
TPM1-205ENST00000357980 RPL39P62891 51 aaKnown RBP11.97□□□□□ -0.49
TPM1-205ENST00000357980 ATP5LO75964 103 aa11.97□□□□□ -0.49
TPM1-205ENST00000357980 COTL1Q14019 142 aa11.97□□□□□ -0.49
TPM1-205ENST00000357980 PET117Q6UWS5 81 aa11.97□□□□□ -0.49
TPM1-205ENST00000357980 C20orf203Q8NBC4 194 aa11.97□□□□□ -0.49
TPM1-205ENST00000357980 LINC01549A6NIU2 74 aa11.96□□□□□ -0.49
TPM1-205ENST00000357980 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.49
TPM1-205ENST00000357980 SCGB3A1Q96QR1 104 aa11.95□□□□□ -0.5
TPM1-205ENST00000357980 IGIPA6NJ69 53 aa11.95□□□□□ -0.5
TPM1-205ENST00000357980 GYPEP15421 78 aa11.95□□□□□ -0.5
TPM1-205ENST00000357980 LINC01545Q5VT33 79 aa11.95□□□□□ -0.5
TPM1-205ENST00000357980 ERASQ7Z444 233 aa11.95□□□□□ -0.5
TPM1-205ENST00000357980 VSIG2Q96IQ7 327 aa11.95□□□□□ -0.5
TPM1-205ENST00000357980 HUWE1Q7Z6Z7 4374 aaKnown RBP11.95□□□□□ -0.5
TPM1-205ENST00000357980 H0Y8G0 127 aa11.94□□□□□ -0.5
TPM1-205ENST00000357980 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.94□□□□□ -0.5
TPM1-205ENST00000357980 PAX4O43316 350 aa11.94□□□□□ -0.5
TPM1-205ENST00000357980 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
TPM1-205ENST00000357980 ZMAT4Q9H898 229 aa11.94□□□□□ -0.5
TPM1-205ENST00000357980 COL7A1Q02388 2944 aa11.93□□□□□ -0.5
TPM1-205ENST00000357980 TEX43Q6ZNM6 134 aa11.93□□□□□ -0.5
TPM1-205ENST00000357980 F5H768 121 aa11.93□□□□□ -0.5
TPM1-205ENST00000357980 TIMM17AQ99595 171 aa11.93□□□□□ -0.5
TPM1-205ENST00000357980 GTSF1LQ9H1H1 148 aa11.93□□□□□ -0.5
TPM1-205ENST00000357980 TRAV26-1A0A087WT03 109 aa11.91□□□□□ -0.5
TPM1-205ENST00000357980 C20orf202A1L168 122 aa11.91□□□□□ -0.5
TPM1-205ENST00000357980 HTN3P15516 51 aa11.91□□□□□ -0.5
TPM1-205ENST00000357980 LGALS9CQ6DKI2 356 aa11.91□□□□□ -0.5
TPM1-205ENST00000357980 Q6ZTC4 211 aa11.91□□□□□ -0.5
TPM1-205ENST00000357980 B9D2Q9BPU9 175 aa11.91□□□□□ -0.5
TPM1-205ENST00000357980 A0A0J9YY99 117 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 PRSS1P07477 247 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 TMEM141Q96I45 108 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 ODF1Q14990 250 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 Q6ZN92 141 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 C11orf45Q8TAV5 145 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 PMCHL2Q9BQD1 86 aa11.9□□□□□ -0.5
TPM1-205ENST00000357980 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
TPM1-205ENST00000357980 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
TPM1-205ENST00000357980 ATOH7Q8N100 152 aa11.89□□□□□ -0.51
TPM1-205ENST00000357980 PYGO1Q9Y3Y4 419 aa11.89□□□□□ -0.51
TPM1-205ENST00000357980 DNAH9Q9NYC9 4486 aa11.89□□□□□ -0.51
TPM1-205ENST00000357980 MEGF8Q7Z7M0 2845 aa11.89□□□□□ -0.51
TPM1-205ENST00000357980 NANOS2P60321 138 aaKnown RBP11.88□□□□□ -0.51
TPM1-205ENST00000357980 ATP6V0E2Q8NHE4 81 aa11.88□□□□□ -0.51
TPM1-205ENST00000357980 TRAV12-1A0A0B4J245 112 aa11.88□□□□□ -0.51
TPM1-205ENST00000357980 FAM104AQ969W3 186 aa11.88□□□□□ -0.51
TPM1-205ENST00000357980 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
TPM1-205ENST00000357980 SPANXA1Q9NS26 97 aa11.87□□□□□ -0.51
TPM1-205ENST00000357980 IGLV4-3A0A075B6K6 122 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 A0A087WX48 190 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 TRBV6-8A0A0A6YYG3 113 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 S100A12P80511 92 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 OPRPNQ99935 248 aaPredicted RBP11.86□□□□□ -0.51
TPM1-205ENST00000357980 TRBV25-1A0A075B6N4 114 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 NPSP0C0P6 89 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 TMEM97Q5BJF2 176 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
TPM1-205ENST00000357980 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 TIMM21Q9BVV7 248 aa11.86□□□□□ -0.51
TPM1-205ENST00000357980 H3BNG1 76 aa11.85□□□□□ -0.51
TPM1-205ENST00000357980 VAMP8Q9BV40 100 aa11.85□□□□□ -0.51
TPM1-205ENST00000357980 A0A096LPF7 62 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 PRSS29PA6NIE9 313 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 PMVKQ15126 192 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 MRPL23Q16540 153 aaKnown RBP11.84□□□□□ -0.51
TPM1-205ENST00000357980 MAJINQ3KP22 176 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 ZC2HC1BQ5TFG8 222 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 MRPL52Q86TS9 123 aaKnown RBP11.84□□□□□ -0.51
TPM1-205ENST00000357980 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
TPM1-205ENST00000357980 ICOSQ9Y6W8 199 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 STAB2Q8WWQ8 2551 aa11.84□□□□□ -0.51
TPM1-205ENST00000357980 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.51
TPM1-205ENST00000357980 CST9LQ9H4G1 147 aa11.83□□□□□ -0.51
TPM1-205ENST00000357980 TRAV9-2A0A087WT02 112 aa11.83□□□□□ -0.52
TPM1-205ENST00000357980 F8VRH5 84 aa11.83□□□□□ -0.52
TPM1-205ENST00000357980 FGF6P10767 208 aa11.83□□□□□ -0.52
TPM1-205ENST00000357980 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
TPM1-205ENST00000357980 CSDC2Q9Y534 153 aaKnown RBP11.83□□□□□ -0.52
TPM1-205ENST00000357980 DEFB131BA0A096LNP1 70 aa11.82□□□□□ -0.52
TPM1-205ENST00000357980 H7C423 109 aa11.82□□□□□ -0.52
TPM1-205ENST00000357980 SH2D6Q7Z4S9 175 aa11.82□□□□□ -0.52
TPM1-205ENST00000357980 AMELXQ99217 191 aa11.82□□□□□ -0.52
TPM1-205ENST00000357980 DPM2O94777 84 aa11.81□□□□□ -0.52
TPM1-205ENST00000357980 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
TPM1-205ENST00000357980 DEFA6Q01524 100 aa11.81□□□□□ -0.52
TPM1-205ENST00000357980 PAPPA-AS1Q5QFB9 102 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms