RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 LINC00469Q8N7U9 141 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 PRADC1Q9BSG0 188 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 SCRT2Q9NQ03 307 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 DNLZQ5SXM8 178 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 C16orf74Q96GX8 76 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 SNHG12Q9BXW3 62 aa8.04□□□□□ -1.12
SVIP-201ENST00000354193 IGHV4-4A0A075B6R2 117 aa8.03□□□□□ -1.12
SVIP-201ENST00000354193 ZNF625Q96I27 306 aaPredicted RBP8.03□□□□□ -1.12
SVIP-201ENST00000354193 HIST1H4GQ99525 98 aa8.03□□□□□ -1.12
SVIP-201ENST00000354193 IGHV4-30-4P0DP06 118 aa8.03□□□□□ -1.12
SVIP-201ENST00000354193 SLC25A29Q8N8R3 303 aa8.03□□□□□ -1.12
SVIP-201ENST00000354193 LINC01545Q5VT33 79 aa8.03□□□□□ -1.12
SVIP-201ENST00000354193 C20orf144Q9BQM9 153 aa8.03□□□□□ -1.12
SVIP-201ENST00000354193 A0A0J9YXV3 536 aa8.02□□□□□ -1.12
SVIP-201ENST00000354193 Q8N976 141 aa8.02□□□□□ -1.12
SVIP-201ENST00000354193 CHAC1Q9BUX1 264 aa8.02□□□□□ -1.12
SVIP-201ENST00000354193 C11orf68Q9H3H3 251 aaKnown RBP8.02□□□□□ -1.12
SVIP-201ENST00000354193 GYPEP15421 78 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 LGALS9BQ3B8N2 356 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 LGALS9CQ6DKI2 356 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 H7C2G1 150 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 NPC2P61916 151 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 ODF1Q14990 250 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 F8VRH5 84 aa8.02□□□□□ -1.13
SVIP-201ENST00000354193 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.13
SVIP-201ENST00000354193 MORN3Q6PF18 240 aaPredicted RBP8.02□□□□□ -1.13
SVIP-201ENST00000354193 ZNF815PA8K554 130 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 NEXN-AS1Q8NBZ9 246 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 BAALCQ8WXS3 180 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 PAX4O43316 350 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 PMVKQ15126 192 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 KIR2DL5BA0A0G2JN68 375 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 KIR2DL5BA0A0G2JPC4 375 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 LINC00315P59091 139 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 KIR2DL5AQ8N109 375 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 TMEM101Q96IK0 257 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 KIF25-AS1Q9Y6Z4 181 aa8.01□□□□□ -1.13
SVIP-201ENST00000354193 TRBV7-3A0A075B6L6 115 aa8□□□□□ -1.13
SVIP-201ENST00000354193 K7EQD1 137 aa8□□□□□ -1.13
SVIP-201ENST00000354193 PAPPA-AS1Q5QFB9 102 aa8□□□□□ -1.13
SVIP-201ENST00000354193 HHLA3Q9XRX5 114 aa8□□□□□ -1.13
SVIP-201ENST00000354193 A0A087WX48 190 aa8□□□□□ -1.13
SVIP-201ENST00000354193 BEAN1Q3B7T3 259 aa8□□□□□ -1.13
SVIP-201ENST00000354193 OR5A1Q8NGJ0 315 aa8□□□□□ -1.13
SVIP-201ENST00000354193 G3V4G9 280 aa8□□□□□ -1.13
SVIP-201ENST00000354193 POLR2KP53803 58 aaKnown RBP8□□□□□ -1.13
SVIP-201ENST00000354193 C2orf88Q9BSF0 95 aa8□□□□□ -1.13
SVIP-201ENST00000354193 COL5A1-AS1Q5SY13 56 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 RNASE8Q8TDE3 154 aaKnown RBP7.99□□□□□ -1.13
SVIP-201ENST00000354193 IGKV2D-26A0A0A0MRZ7 120 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 POM121L12Q8N7R1 296 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 CITED1Q99966 193 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 LINC00467Q9BRT7 94 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 PKD1L1Q8TDX9 2849 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 C11orf86A6NJI1 115 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 C20orf203Q8NBC4 194 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 TOMM6Q96B49 74 aa7.99□□□□□ -1.13
SVIP-201ENST00000354193 TRRAPQ9Y4A5 3859 aa7.98□□□□□ -1.13
SVIP-201ENST00000354193 PLNP26678 52 aa7.98□□□□□ -1.13
SVIP-201ENST00000354193 IGHV4-28A0A0C4DH34 117 aa7.98□□□□□ -1.13
SVIP-201ENST00000354193 APOMO95445 188 aa7.98□□□□□ -1.13
SVIP-201ENST00000354193 IGLV2-18A0A075B6J9 118 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 RHOHQ15669 191 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 NHP2Q9NX24 153 aaKnown RBP7.97□□□□□ -1.13
SVIP-201ENST00000354193 IGLV10-54A0A075B6I4 117 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 TRAV26-1A0A087WT03 109 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 Q6ZUT4 128 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 TMEM243Q9BU79 118 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 TRBV25-1A0A075B6N4 114 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 TSHBP01222 138 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 SPINK8P0C7L1 97 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 TMEM141Q96I45 108 aa7.97□□□□□ -1.13
SVIP-201ENST00000354193 TRBV27A0A0K0K1C4 114 aa7.96□□□□□ -1.13
SVIP-201ENST00000354193 FGF6P10767 208 aa7.96□□□□□ -1.13
SVIP-201ENST00000354193 TRAV4A0A0B4J268 109 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 PRIMA1Q86XR5 153 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 TRAV8-3A0A0A6YYJ7 113 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 K7EP13 123 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 GIG44P09565 113 aaPredicted RBP7.96□□□□□ -1.14
SVIP-201ENST00000354193 COX8AP10176 69 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 Q1RN00 199 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 C19orf73Q9NVV2 129 aa7.96□□□□□ -1.14
SVIP-201ENST00000354193 SPART-AS1P0CW21 52 aa7.95□□□□□ -1.14
SVIP-201ENST00000354193 MEIG1Q5JSS6 88 aa7.95□□□□□ -1.14
SVIP-201ENST00000354193 CST9LQ9H4G1 147 aa7.95□□□□□ -1.14
SVIP-201ENST00000354193 RS1O15537 224 aa7.95□□□□□ -1.14
SVIP-201ENST00000354193 A8MZ25 164 aa7.95□□□□□ -1.14
SVIP-201ENST00000354193 ATP6V0E2Q8NHE4 81 aa7.95□□□□□ -1.14
SVIP-201ENST00000354193 NXPH4O95158 308 aa7.94□□□□□ -1.14
SVIP-201ENST00000354193 ATP5G1P05496 136 aa7.94□□□□□ -1.14
SVIP-201ENST00000354193 C5orf38Q86SI9 138 aa7.94□□□□□ -1.14
SVIP-201ENST00000354193 STAB2Q8WWQ8 2551 aa7.94□□□□□ -1.14
SVIP-201ENST00000354193 ANGP03950 147 aaKnown RBP7.93□□□□□ -1.14
SVIP-201ENST00000354193 XCL1P47992 114 aa7.93□□□□□ -1.14
SVIP-201ENST00000354193 VSIG2Q96IQ7 327 aa7.93□□□□□ -1.14
SVIP-201ENST00000354193 TIMM21Q9BVV7 248 aa7.93□□□□□ -1.14
SVIP-201ENST00000354193 LINC00694P0DN24 101 aa7.93□□□□□ -1.14
SVIP-201ENST00000354193 IGLV4-3A0A075B6K6 122 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms