RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 M0QXV9 152 aa13.56□□□□□ -0.24
SMC4-201ENST00000344722 FAM222AQ5U5X8 452 aa13.56□□□□□ -0.24
SMC4-201ENST00000344722 FREM1Q5H8C1 2179 aa13.56□□□□□ -0.24
SMC4-201ENST00000344722 GAS8-AS1O95177 125 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 UBE2D1P51668 147 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 IGHV4-61A0A0C4DH41 118 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 NDUFC1O43677 76 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 UBE2BP63146 152 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 UBE2D3P61077 147 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 UBE2D2P62837 147 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 FAM110AQ9BQ89 295 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 V9GYY9 64 aa13.55□□□□□ -0.24
SMC4-201ENST00000344722 EP300Q09472 2414 aaPredicted RBP13.55□□□□□ -0.24
SMC4-201ENST00000344722 IGF2-ASQ6U949 168 aa13.54□□□□□ -0.24
SMC4-201ENST00000344722 ATG2AQ2TAZ0 1938 aa13.54□□□□□ -0.24
SMC4-201ENST00000344722 LY6LH3BQJ8 138 aa13.54□□□□□ -0.24
SMC4-201ENST00000344722 MPLKIPQ8TAP9 179 aa13.54□□□□□ -0.24
SMC4-201ENST00000344722 CACNA1HO95180 2353 aa13.54□□□□□ -0.24
SMC4-201ENST00000344722 IBA57-AS1B1ANH7 110 aa13.54□□□□□ -0.24
SMC4-201ENST00000344722 PRB2P02812 416 aaPredicted RBP13.53□□□□□ -0.24
SMC4-201ENST00000344722 COX7BP24311 80 aa13.53□□□□□ -0.24
SMC4-201ENST00000344722 C11orf21Q9P2W6 132 aa13.53□□□□□ -0.24
SMC4-201ENST00000344722 PKIGQ9Y2B9 76 aa13.53□□□□□ -0.24
SMC4-201ENST00000344722 SPAG11BQ08648 103 aa13.53□□□□□ -0.24
SMC4-201ENST00000344722 PIK3CD-AS1Q5SR53 167 aa13.53□□□□□ -0.24
SMC4-201ENST00000344722 IGKV2D-24A0A075B6R9 120 aa13.52□□□□□ -0.24
SMC4-201ENST00000344722 FSTL3O95633 263 aa13.52□□□□□ -0.24
SMC4-201ENST00000344722 POLR2KP53803 58 aaKnown RBP13.52□□□□□ -0.24
SMC4-201ENST00000344722 MED12LQ86YW9 2145 aa13.52□□□□□ -0.25
SMC4-201ENST00000344722 DYSFO75923 2080 aa13.52□□□□□ -0.25
SMC4-201ENST00000344722 NDUFS5O43920 106 aa13.52□□□□□ -0.25
SMC4-201ENST00000344722 TSHBP01222 138 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 NACAE9PAV3 2078 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 BPY2O14599 106 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 SLPIP03973 132 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 EBI3Q14213 229 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 Q6JHZ5 121 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 LINC00526Q96FQ7 95 aa13.51□□□□□ -0.25
SMC4-201ENST00000344722 SPTAN1Q13813 2472 aaKnown RBP13.51□□□□□ -0.25
SMC4-201ENST00000344722 A0A1W2PNU3 283 aaPredicted RBP13.5□□□□□ -0.25
SMC4-201ENST00000344722 SMIM9A6NGZ8 99 aa13.5□□□□□ -0.25
SMC4-201ENST00000344722 WISP2O76076 250 aa13.5□□□□□ -0.25
SMC4-201ENST00000344722 Q96MF0 132 aa13.5□□□□□ -0.25
SMC4-201ENST00000344722 CREBBPQ92793 2442 aa13.5□□□□□ -0.25
SMC4-201ENST00000344722 A6NDX4 124 aa13.49□□□□□ -0.25
SMC4-201ENST00000344722 RNASE3P12724 160 aaKnown RBP13.49□□□□□ -0.25
SMC4-201ENST00000344722 LINC01548A6NM66 108 aa13.49□□□□□ -0.25
SMC4-201ENST00000344722 A0A096LNJ9 63 aa13.49□□□□□ -0.25
SMC4-201ENST00000344722 A0A0U1RQV1 116 aa13.49□□□□□ -0.25
SMC4-201ENST00000344722 DOPEY2Q9Y3R5 2298 aa13.49□□□□□ -0.25
SMC4-201ENST00000344722 DSCAML1Q8TD84 2053 aa13.48□□□□□ -0.25
SMC4-201ENST00000344722 K7EQG2 157 aa13.48□□□□□ -0.25
SMC4-201ENST00000344722 NDUFB1O75438 58 aa13.47□□□□□ -0.25
SMC4-201ENST00000344722 C2orf16Q68DN1 1984 aa13.47□□□□□ -0.25
SMC4-201ENST00000344722 IGIPA6NJ69 53 aa13.47□□□□□ -0.25
SMC4-201ENST00000344722 ZGRF1Q86YA3 2104 aa13.47□□□□□ -0.25
SMC4-201ENST00000344722 ACACAQ13085 2346 aa13.47□□□□□ -0.25
SMC4-201ENST00000344722 GPR179Q6PRD1 2367 aa13.47□□□□□ -0.25
SMC4-201ENST00000344722 MAP6D1Q9H9H5 199 aa13.46□□□□□ -0.25
SMC4-201ENST00000344722 CACNA1GO43497 2377 aa13.46□□□□□ -0.25
SMC4-201ENST00000344722 LTBP2Q14767 1821 aa13.46□□□□□ -0.25
SMC4-201ENST00000344722 A8MZ25 164 aa13.46□□□□□ -0.26
SMC4-201ENST00000344722 MRPL55Q7Z7F7 128 aaKnown RBP13.46□□□□□ -0.26
SMC4-201ENST00000344722 PRR9Q5T870 116 aa13.45□□□□□ -0.26
SMC4-201ENST00000344722 KIAA1549Q9HCM3 1950 aa13.45□□□□□ -0.26
SMC4-201ENST00000344722 IGHV4-30-2A0A087WSY4 118 aa13.45□□□□□ -0.26
SMC4-201ENST00000344722 C4orf3Q8WVX3 66 aa13.45□□□□□ -0.26
SMC4-201ENST00000344722 CACNA1BQ00975 2339 aa13.44□□□□□ -0.26
SMC4-201ENST00000344722 CRIP2P52943 208 aaPredicted RBP13.44□□□□□ -0.26
SMC4-201ENST00000344722 SPTBN2O15020 2390 aa13.44□□□□□ -0.26
SMC4-201ENST00000344722 TNCP24821 2201 aa13.44□□□□□ -0.26
SMC4-201ENST00000344722 MRPS36P82909 103 aaKnown RBP13.44□□□□□ -0.26
SMC4-201ENST00000344722 MUC22E2RYF6 1773 aaPredicted RBP13.43□□□□□ -0.26
SMC4-201ENST00000344722 FBXL19-AS1Q494R0 122 aa13.43□□□□□ -0.26
SMC4-201ENST00000344722 IGLV4-69A0A075B6H9 119 aa13.42□□□□□ -0.26
SMC4-201ENST00000344722 SPART-AS1P0CW21 52 aa13.42□□□□□ -0.26
SMC4-201ENST00000344722 CDIP1Q9H305 208 aa13.42□□□□□ -0.26
SMC4-201ENST00000344722 UBE2D4Q9Y2X8 147 aa13.42□□□□□ -0.26
SMC4-201ENST00000344722 CHKB-CPT1BH3BT56 60 aa13.42□□□□□ -0.26
SMC4-201ENST00000344722 HCFC1P51610 2035 aa13.41□□□□□ -0.26
SMC4-201ENST00000344722 COX8CQ7Z4L0 72 aa13.41□□□□□ -0.26
SMC4-201ENST00000344722 PSMG3-AS1Q96PY0 264 aa13.41□□□□□ -0.26
SMC4-201ENST00000344722 Q6ZTI0 123 aa13.41□□□□□ -0.26
SMC4-201ENST00000344722 WFDC11Q8NEX6 87 aa13.41□□□□□ -0.26
SMC4-201ENST00000344722 SMIM26A0A096LP01 95 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 KLLNB2CW77 178 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 SCXQ7RTU7 201 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 PRO0255Q9UI72 69 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 ADORA2A-AS1P86434 159 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 C9orf85Q96MD7 179 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 NOTCH3Q9UM47 2321 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 HRCT1Q6UXD1 115 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 SNURFQ9Y675 71 aa13.4□□□□□ -0.26
SMC4-201ENST00000344722 PCNX1Q96RV3 2341 aa13.39□□□□□ -0.27
SMC4-201ENST00000344722 SPTSSBQ8NFR3 76 aa13.39□□□□□ -0.27
SMC4-201ENST00000344722 SMIM11BQ8TCY0 68 aa13.39□□□□□ -0.27
SMC4-201ENST00000344722 POM121L12Q8N7R1 296 aa13.38□□□□□ -0.27
SMC4-201ENST00000344722 CRYGDP07320 174 aa13.38□□□□□ -0.27
SMC4-201ENST00000344722 SERP1Q9Y6X1 66 aa13.38□□□□□ -0.27
SMC4-201ENST00000344722 COL6A6A6NMZ7 2263 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 251.5 ms