RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 A0A087WX48 190 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 APOC4P55056 127 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 FHL2Q14192 279 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 Q6ZN92 141 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 CHCHD7Q9BUK0 85 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 PRSS29PA6NIE9 313 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 K7EQD1 137 aa9.61□□□□□ -0.87
CDC42-202ENST00000344548 IGHV4-28A0A0C4DH34 117 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 GAGE12JA6NER3 117 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 GAGE1Q13065 139 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 GAGE4Q13068 117 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 GAGE5Q13069 117 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 RHOHQ15669 191 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 GAGE13Q4V321 117 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 LINC00612Q8N6U2 182 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 DNAH3Q8TD57 4116 aa9.6□□□□□ -0.87
CDC42-202ENST00000344548 TRBV7-3A0A075B6L6 115 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 IGKV2D-26A0A0A0MRZ7 120 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 DEFA6Q01524 100 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 FAM222AQ5U5X8 452 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 MDFIQ99750 246 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.59□□□□□ -0.87
CDC42-202ENST00000344548 IGKV2-29A2NJV5 120 aaPredicted RBP9.59□□□□□ -0.87
CDC42-202ENST00000344548 NTM-AS1Q6ZSK4 140 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 Q8NAQ8 132 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 DNAJC30Q96LL9 226 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 RETNQ9HD89 108 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 TENM3Q9P273 2699 aa9.59□□□□□ -0.87
CDC42-202ENST00000344548 SMIM9A6NGZ8 99 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 IGKCP01834 107 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 PRB2P02812 416 aaPredicted RBP9.58□□□□□ -0.88
CDC42-202ENST00000344548 TTTY13Q9BZ97 58 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 UQCR10Q9UDW1 63 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 CELA1Q9UNI1 258 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 TRAV12-1A0A0B4J245 112 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 DPM2O94777 84 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 RNF183Q96D59 192 aa9.58□□□□□ -0.88
CDC42-202ENST00000344548 MGAM2Q2M2H8 2515 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 TRGV4A0A0C4DH28 118 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 HSBP1L1C9JCN9 74 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 EREGO14944 169 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 RNASE13Q5GAN3 156 aaKnown RBP9.57□□□□□ -0.88
CDC42-202ENST00000344548 TIMM17AQ99595 171 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 CHTOPQ9Y3Y2 248 aaKnown RBP9.57□□□□□ -0.88
CDC42-202ENST00000344548 IGLV4-69A0A075B6H9 119 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 F8VRH5 84 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 UBE2D3P61077 147 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 UBE2D2P62837 147 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 PCP2Q8IVA1 136 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 CST9LQ9H4G1 147 aa9.57□□□□□ -0.88
CDC42-202ENST00000344548 TRBV10-1A0A0K0K1A3 114 aa9.56□□□□□ -0.88
CDC42-202ENST00000344548 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
CDC42-202ENST00000344548 IGLV4-3A0A075B6K6 122 aa9.56□□□□□ -0.88
CDC42-202ENST00000344548 TRBV6-4A0A1B0GX49 114 aa9.56□□□□□ -0.88
CDC42-202ENST00000344548 LINC00694P0DN24 101 aa9.56□□□□□ -0.88
CDC42-202ENST00000344548 FGF6P10767 208 aa9.56□□□□□ -0.88
CDC42-202ENST00000344548 RPL36AP83881 106 aaKnown RBP9.56□□□□□ -0.88
CDC42-202ENST00000344548 RPL36ALQ969Q0 106 aaKnown RBP9.56□□□□□ -0.88
CDC42-202ENST00000344548 COTL1Q14019 142 aa9.55□□□□□ -0.88
CDC42-202ENST00000344548 SAMD5Q5TGI4 173 aa9.55□□□□□ -0.88
CDC42-202ENST00000344548 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
CDC42-202ENST00000344548 G0S2P27469 103 aa9.54□□□□□ -0.88
CDC42-202ENST00000344548 PMVKQ15126 192 aa9.54□□□□□ -0.88
CDC42-202ENST00000344548 UBE2D4Q9Y2X8 147 aa9.54□□□□□ -0.88
CDC42-202ENST00000344548 C11orf86A6NJI1 115 aa9.54□□□□□ -0.88
CDC42-202ENST00000344548 COX8AP10176 69 aa9.54□□□□□ -0.88
CDC42-202ENST00000344548 NMUP48645 174 aa9.54□□□□□ -0.88
CDC42-202ENST00000344548 HNRNPA3P51991 378 aaKnown RBP9.53□□□□□ -0.88
CDC42-202ENST00000344548 SLC25A34Q6PIV7 304 aa9.53□□□□□ -0.88
CDC42-202ENST00000344548 MIFP14174 115 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 C2orf91Q6ZV80 131 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 LYRM9A8MSI8 78 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 A8MZ25 164 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 PLNP26678 52 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 CRYBA4P53673 196 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 Q6ZUT4 128 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 DAZ4Q86SG3 579 aaKnown RBP9.52□□□□□ -0.89
CDC42-202ENST00000344548 DAZ3Q9NR90 486 aaKnown RBP9.52□□□□□ -0.89
CDC42-202ENST00000344548 PYGO1Q9Y3Y4 419 aa9.52□□□□□ -0.89
CDC42-202ENST00000344548 LINC01549A6NIU2 74 aa9.51□□□□□ -0.89
CDC42-202ENST00000344548 CIDEAO60543 219 aa9.51□□□□□ -0.89
CDC42-202ENST00000344548 SBSPONQ8IVN8 264 aa9.51□□□□□ -0.89
CDC42-202ENST00000344548 BOD1L2Q8IYS8 172 aa9.51□□□□□ -0.89
CDC42-202ENST00000344548 MAPKAPK5-AS1Q8N8E1 139 aa9.51□□□□□ -0.89
CDC42-202ENST00000344548 A0A096LPF7 62 aa9.5□□□□□ -0.89
CDC42-202ENST00000344548 A0A0J9YXV3 536 aa9.5□□□□□ -0.89
CDC42-202ENST00000344548 VSIG2Q96IQ7 327 aa9.5□□□□□ -0.89
CDC42-202ENST00000344548 AMELXQ99217 191 aa9.5□□□□□ -0.89
CDC42-202ENST00000344548 A0A0J9YY99 117 aa9.49□□□□□ -0.89
CDC42-202ENST00000344548 GYPEP15421 78 aa9.49□□□□□ -0.89
CDC42-202ENST00000344548 PRADC1Q9BSG0 188 aa9.49□□□□□ -0.89
CDC42-202ENST00000344548 VCX2Q9H322 139 aa9.49□□□□□ -0.89
CDC42-202ENST00000344548 DAD1P61803 113 aa9.49□□□□□ -0.89
CDC42-202ENST00000344548 BATFQ16520 125 aa9.49□□□□□ -0.89
CDC42-202ENST00000344548 MRPS16Q9Y3D3 137 aaKnown RBP9.49□□□□□ -0.89
CDC42-202ENST00000344548 TRAV8-6A0A0B4J262 113 aa9.48□□□□□ -0.89
CDC42-202ENST00000344548 M0R143 59 aa9.48□□□□□ -0.89
CDC42-202ENST00000344548 HINT1P49773 126 aaPredicted RBP9.48□□□□□ -0.89
CDC42-202ENST00000344548 PRO0255Q9UI72 69 aa9.48□□□□□ -0.89
CDC42-202ENST00000344548 SPART-AS1P0CW21 52 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 943.5 ms