RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 APOMO95445 188 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 PRM2P04554 102 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 CRYBA4P53673 196 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 UBE2D3P61077 147 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 UBE2D2P62837 147 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 KHDC1LQ5JSQ8 128 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 TNFRSF18Q9Y5U5 241 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 ETDBQ3ZM63 59 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 DYNLRB2Q8TF09 96 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 FAM104AQ969W3 186 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
TDP2-201ENST00000341060 CFC1BP0CG36 223 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 CFC1P0CG37 223 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 CD28P10747 220 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 MTURNQ8N3F0 131 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 C11orf72Q8NBR9 251 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 DEFB114Q30KQ6 69 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 CFAP126Q5VTH2 177 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 SH2D6Q7Z4S9 175 aa10.6□□□□□ -0.71
TDP2-201ENST00000341060 ACANP16112 2415 aa10.59□□□□□ -0.71
TDP2-201ENST00000341060 J3QR89 54 aa10.59□□□□□ -0.71
TDP2-201ENST00000341060 MRPS36P82909 103 aaKnown RBP10.59□□□□□ -0.71
TDP2-201ENST00000341060 LYRM7Q5U5X0 104 aa10.59□□□□□ -0.71
TDP2-201ENST00000341060 RAX2Q96IS3 184 aa10.59□□□□□ -0.71
TDP2-201ENST00000341060 LOC107984156A0A0G2JMH3 177 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 ARL17AQ8IVW1 177 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 C10orf126Q8N4M7 172 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 IGHV3-64A0A075B6Q5 118 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 INSP01308 110 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 Q6ZSN1 163 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 TMEM86BQ8N661 226 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 LINC01587Q99440 93 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 Q9UF83 564 aa10.58□□□□□ -0.72
TDP2-201ENST00000341060 FLNBO75369 2602 aaKnown RBP10.58□□□□□ -0.72
TDP2-201ENST00000341060 SPXQ9BT56 116 aa10.57□□□□□ -0.72
TDP2-201ENST00000341060 CHCHD7Q9BUK0 85 aa10.57□□□□□ -0.72
TDP2-201ENST00000341060 IGHV3-53P01767 116 aa10.57□□□□□ -0.72
TDP2-201ENST00000341060 BEAN1Q3B7T3 259 aa10.57□□□□□ -0.72
TDP2-201ENST00000341060 CEMP1Q6PRD7 247 aaPredicted RBP10.57□□□□□ -0.72
TDP2-201ENST00000341060 SFTA2Q6UW10 78 aa10.57□□□□□ -0.72
TDP2-201ENST00000341060 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
TDP2-201ENST00000341060 SONP18583 2426 aaKnown RBP10.56□□□□□ -0.72
TDP2-201ENST00000341060 TMEM238C9JI98 176 aa10.56□□□□□ -0.72
TDP2-201ENST00000341060 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
TDP2-201ENST00000341060 SPANXA1Q9NS26 97 aa10.56□□□□□ -0.72
TDP2-201ENST00000341060 PRO1854Q9UHT4 67 aa10.56□□□□□ -0.72
TDP2-201ENST00000341060 UBE2D4Q9Y2X8 147 aa10.56□□□□□ -0.72
TDP2-201ENST00000341060 PSMB2P49721 201 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 Q6ZSV7 163 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 DNAJC30Q96LL9 226 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 TIMM21Q9BVV7 248 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 OTOGQ6ZRI0 2925 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 WNK1Q9H4A3 2382 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 A4D1N5 150 aa10.55□□□□□ -0.72
TDP2-201ENST00000341060 TRBV20-1A0A075B6N2 111 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 SMCPP49901 116 aaPredicted RBP10.54□□□□□ -0.72
TDP2-201ENST00000341060 ODF3L2Q3SX64 289 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 HIST2H2BDQ6DRA6 164 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 ATP6V0E2Q8NHE4 81 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 CUBNO60494 3623 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 A0A0J9YXY3 114 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 TINCRA0A1B0GVN0 87 aa10.54□□□□□ -0.72
TDP2-201ENST00000341060 TRAV25A0A0B4J276 109 aa10.53□□□□□ -0.72
TDP2-201ENST00000341060 A0A0B4J2C4 111 aa10.53□□□□□ -0.72
TDP2-201ENST00000341060 RS1O15537 224 aa10.53□□□□□ -0.72
TDP2-201ENST00000341060 TCL1BO95988 128 aa10.53□□□□□ -0.72
TDP2-201ENST00000341060 RNASE13Q5GAN3 156 aaKnown RBP10.53□□□□□ -0.72
TDP2-201ENST00000341060 C1QTNF4Q9BXJ3 329 aa10.53□□□□□ -0.72
TDP2-201ENST00000341060 TSSC4Q9Y5U2 329 aaPredicted RBP10.53□□□□□ -0.72
TDP2-201ENST00000341060 IGHV1-58A0A0C4DH39 117 aa10.52□□□□□ -0.72
TDP2-201ENST00000341060 EIF4EBP3O60516 100 aaPredicted RBP10.52□□□□□ -0.72
TDP2-201ENST00000341060 FHL3Q13643 280 aa10.52□□□□□ -0.72
TDP2-201ENST00000341060 MUSTN1Q8IVN3 82 aa10.52□□□□□ -0.72
TDP2-201ENST00000341060 SPATA25Q9BR10 227 aa10.52□□□□□ -0.72
TDP2-201ENST00000341060 NF1P21359 2839 aa10.52□□□□□ -0.73
TDP2-201ENST00000341060 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.52□□□□□ -0.73
TDP2-201ENST00000341060 TRAV8-3A0A0A6YYJ7 113 aa10.52□□□□□ -0.73
TDP2-201ENST00000341060 IGKV2-29A2NJV5 120 aaPredicted RBP10.52□□□□□ -0.73
TDP2-201ENST00000341060 GAGE12HA6NDE8 117 aa10.52□□□□□ -0.73
TDP2-201ENST00000341060 DNAJC9-AS1A6NH13 148 aa10.52□□□□□ -0.73
TDP2-201ENST00000341060 TEX29Q8N6K0 151 aa10.52□□□□□ -0.73
TDP2-201ENST00000341060 TMEM263Q8WUH6 116 aaKnown RBP10.52□□□□□ -0.73
TDP2-201ENST00000341060 INSL3P51460 131 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 LITAFQ99732 161 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 XCL2Q9UBD3 114 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 IGHV3-33P01772 117 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 AZU1P20160 251 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 FOXI1Q12951 378 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 Q6ZUT4 128 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 STHQ8IWL8 128 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 IL17DQ8TAD2 202 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 VSIG2Q96IQ7 327 aa10.51□□□□□ -0.73
TDP2-201ENST00000341060 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.5□□□□□ -0.73
TDP2-201ENST00000341060 IGHV3-38A0A0C4DH36 116 aa10.5□□□□□ -0.73
TDP2-201ENST00000341060 ZNF418Q8TF45 676 aaPredicted RBP10.5□□□□□ -0.73
TDP2-201ENST00000341060 C1orf158Q8N1D5 194 aa10.49□□□□□ -0.73
TDP2-201ENST00000341060 ADARB2-AS1A8MUL3 147 aa10.49□□□□□ -0.73
TDP2-201ENST00000341060 SIGMAR1Q99720 223 aa10.49□□□□□ -0.73
TDP2-201ENST00000341060 SCGB1C2P0DMR2 95 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms