RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 NAT8BQ9UHF3 227 aa10.19□□□□□ -0.78
VAPA-201ENST00000340541 Q8N814 137 aa10.18□□□□□ -0.78
VAPA-201ENST00000340541 TRBV6-5A0A0K0K1A5 114 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 ANGP03950 147 aaKnown RBP10.17□□□□□ -0.78
VAPA-201ENST00000340541 RAB4AP20338 218 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 RIGQ13278 110 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 AMN1Q8IY45 258 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 RMI2Q96E14 147 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 TMEM243Q9BU79 118 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 PRR34Q9NV39 138 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 COX11Q9Y6N1 276 aa10.17□□□□□ -0.78
VAPA-201ENST00000340541 IGKV2D-24A0A075B6R9 120 aa10.16□□□□□ -0.78
VAPA-201ENST00000340541 INAFM2P0DMQ5 153 aa10.16□□□□□ -0.78
VAPA-201ENST00000340541 Q0VG73 95 aa10.16□□□□□ -0.78
VAPA-201ENST00000340541 COTL1Q14019 142 aa10.16□□□□□ -0.78
VAPA-201ENST00000340541 SDHAF1A6NFY7 115 aa10.15□□□□□ -0.78
VAPA-201ENST00000340541 RPS10P46783 165 aaKnown RBP10.15□□□□□ -0.78
VAPA-201ENST00000340541 KRTAP10-1P60331 282 aa10.15□□□□□ -0.78
VAPA-201ENST00000340541 C20orf203Q8NBC4 194 aa10.15□□□□□ -0.78
VAPA-201ENST00000340541 NTN5Q8WTR8 489 aaPredicted RBP10.15□□□□□ -0.78
VAPA-201ENST00000340541 BAALCQ8WXS3 180 aa10.15□□□□□ -0.78
VAPA-201ENST00000340541 A0A1B0GUV1 79 aa10.14□□□□□ -0.79
VAPA-201ENST00000340541 LECT2O14960 151 aa10.14□□□□□ -0.79
VAPA-201ENST00000340541 GCSHP23434 173 aa10.14□□□□□ -0.79
VAPA-201ENST00000340541 AMTP48728 403 aa10.14□□□□□ -0.79
VAPA-201ENST00000340541 MRAP2Q96G30 205 aa10.14□□□□□ -0.79
VAPA-201ENST00000340541 IGLV4-60A0A075B6I1 120 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 NCR2O95944 276 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 CRPP02741 224 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 MIAQ16674 131 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 KRTAP26-1Q6PEX3 210 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 CLPSL2Q6UWE3 100 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 LINC00269Q8N2A0 174 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 TMEM70Q9BUB7 260 aa10.13□□□□□ -0.79
VAPA-201ENST00000340541 IGLV5-52A0A0A0MRZ9 124 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 SMKR1H3BMG3 65 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 LCE2BO14633 110 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 POLR2KP53803 58 aaKnown RBP10.12□□□□□ -0.79
VAPA-201ENST00000340541 FAM104BQ5XKR9 115 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 NRACQ8N912 160 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 C1orf43Q9BWL3 253 aa10.12□□□□□ -0.79
VAPA-201ENST00000340541 A0A1B0GW15 77 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 I3L3M4 83 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 TSHBP01222 138 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 CAMPP49913 170 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 REG3AQ06141 175 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 PNRC1Q12796 327 aaPredicted RBP10.11□□□□□ -0.79
VAPA-201ENST00000340541 Q5VSD8 79 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 ST20Q9HBF5 79 aa10.11□□□□□ -0.79
VAPA-201ENST00000340541 TRBV27A0A0K0K1C4 114 aa10.1□□□□□ -0.79
VAPA-201ENST00000340541 PPP1R2P9O14990 202 aa10.1□□□□□ -0.79
VAPA-201ENST00000340541 ADCYAP1P18509 176 aa10.1□□□□□ -0.79
VAPA-201ENST00000340541 MRPL51Q4U2R6 128 aaKnown RBP10.1□□□□□ -0.79
VAPA-201ENST00000340541 MRPL54Q6P161 138 aaKnown RBP10.1□□□□□ -0.79
VAPA-201ENST00000340541 DNAH8Q96JB1 4490 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.09□□□□□ -0.79
VAPA-201ENST00000340541 IGKV2-29A2NJV5 120 aaPredicted RBP10.09□□□□□ -0.79
VAPA-201ENST00000340541 FAM229AH3BQW9 127 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 UBE2L6O14933 153 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 APCSP02743 223 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 ESDP10768 282 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 PMCHP20382 165 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 UQCC3Q6UW78 93 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 TMEM242Q9NWH2 141 aa10.09□□□□□ -0.79
VAPA-201ENST00000340541 DMBT1Q9UGM3 2413 aaPredicted RBP10.09□□□□□ -0.79
VAPA-201ENST00000340541 H7C423 109 aa10.08□□□□□ -0.8
VAPA-201ENST00000340541 HBBP68871 147 aa10.08□□□□□ -0.8
VAPA-201ENST00000340541 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.07□□□□□ -0.8
VAPA-201ENST00000340541 TMEM218A2RU14 115 aa10.07□□□□□ -0.8
VAPA-201ENST00000340541 MT-ND4LP03901 98 aa10.07□□□□□ -0.8
VAPA-201ENST00000340541 FGF6P10767 208 aa10.07□□□□□ -0.8
VAPA-201ENST00000340541 SUMO2P61956 95 aaKnown RBP10.07□□□□□ -0.8
VAPA-201ENST00000340541 ANAPC16Q96DE5 110 aa10.07□□□□□ -0.8
VAPA-201ENST00000340541 SRRM2Q9UQ35 2752 aaKnown RBP10.07□□□□□ -0.8
VAPA-201ENST00000340541 IGLV10-54A0A075B6I4 117 aa10.06□□□□□ -0.8
VAPA-201ENST00000340541 LINC00862A6NCI5 91 aa10.06□□□□□ -0.8
VAPA-201ENST00000340541 PPP1R17O96001 155 aa10.06□□□□□ -0.8
VAPA-201ENST00000340541 HLA-DQA1P01909 254 aa10.06□□□□□ -0.8
VAPA-201ENST00000340541 S100A8P05109 93 aa10.06□□□□□ -0.8
VAPA-201ENST00000340541 ATP5L2Q7Z4Y8 100 aa10.06□□□□□ -0.8
VAPA-201ENST00000340541 TRBV24-1A0A075B6N3 115 aa10.05□□□□□ -0.8
VAPA-201ENST00000340541 TRAV8-4A0A0B4J246 113 aa10.05□□□□□ -0.8
VAPA-201ENST00000340541 USP17L23D6RBM5 183 aa10.05□□□□□ -0.8
VAPA-201ENST00000340541 VCYO14598 125 aa10.05□□□□□ -0.8
VAPA-201ENST00000340541 F8W036 122 aa10.04□□□□□ -0.8
VAPA-201ENST00000340541 SMR3BP02814 79 aaPredicted RBP10.04□□□□□ -0.8
VAPA-201ENST00000340541 CKS2P33552 79 aa10.04□□□□□ -0.8
VAPA-201ENST00000340541 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
VAPA-201ENST00000340541 D6R8Y8 96 aa10.03□□□□□ -0.8
VAPA-201ENST00000340541 TNFRSF6BO95407 300 aa10.03□□□□□ -0.8
VAPA-201ENST00000340541 ZNF25P17030 456 aaPredicted RBP10.03□□□□□ -0.8
VAPA-201ENST00000340541 RPL32P62910 135 aaKnown RBP10.03□□□□□ -0.8
VAPA-201ENST00000340541 HERC1Q15751 4861 aa10.03□□□□□ -0.8
VAPA-201ENST00000340541 RNASEKQ6P5S7 137 aaKnown RBP10.03□□□□□ -0.8
VAPA-201ENST00000340541 C20orf78Q9BR46 151 aa10.03□□□□□ -0.8
VAPA-201ENST00000340541 FAM30AQ9NZY2 134 aa10.03□□□□□ -0.8
VAPA-201ENST00000340541 C7orf77A4D0Y5 90 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 NPYP01303 97 aa10.02□□□□□ -0.81
VAPA-201ENST00000340541 PRSS1P07477 247 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms