RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NDUFC2O95298 119 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 FANCD2OSQ96PS1 177 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 UBE2D4Q9Y2X8 147 aa7.13□□□□□ -1.27
PTCHD4-201ENST00000339488 MED13LQ71F56 2210 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 SDHAF1A6NFY7 115 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 KNCNA6PVL3 124 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 COX7A2LO14548 114 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 GNRH2O43555 120 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 TIMM17BO60830 172 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 FAM229BQ4G0N7 80 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 FAM74A4Q5TZK3 123 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 PSMB8P28062 276 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 BEAN1Q3B7T3 259 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 IGFL2Q6UWQ7 119 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 MUC4Q99102 2169 aa7.12□□□□□ -1.27
PTCHD4-201ENST00000339488 EPM2AB3EWF7 344 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 CD59P13987 128 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 SORL1Q92673 2214 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 PIEZO1Q92508 2521 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 AKAP13Q12802 2813 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 CEP295Q9C0D2 2601 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 SMIM26A0A096LP01 95 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 LY6G6EA0A0G2JKS1 128 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 Q6JHZ5 121 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 SLC25A15Q9Y619 301 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 U3KQA8 63 aa7.11□□□□□ -1.27
PTCHD4-201ENST00000339488 NCR3O14931 201 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHG2P01859 326 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 PLA2G2CQ5R387 149 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 TMEM141Q96I45 108 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 SPTBN1Q01082 2364 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHV1-69DA0A0B4J2H0 117 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHV1-18A0A0C4DH31 117 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 F8WEM9 126 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 INAFM2P0DMQ5 153 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 SUMO4Q6EEV6 95 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 TIMM17AQ99595 171 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 TRBV7-6A0A0J9YX20 115 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 F8W735 103 aaPredicted RBP7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 SNRPD3P62318 126 aaKnown RBP7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 ENHOQ6UWT2 76 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 VMO1Q7Z5L0 202 aa7.1□□□□□ -1.27
PTCHD4-201ENST00000339488 APC2O95996 2303 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 IGHV4-4A0A075B6R2 117 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 RPL11P62913 178 aaKnown RBP7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 TRBV27A0A0K0K1C4 114 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 IGKV3-15P01624 115 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 TMEM190Q8WZ59 177 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 SPRR3Q9UBC9 169 aa7.09□□□□□ -1.27
PTCHD4-201ENST00000339488 LYPD2Q6UXB3 125 aa7.08□□□□□ -1.28
PTCHD4-201ENST00000339488 COX7A1P24310 79 aa7.08□□□□□ -1.28
PTCHD4-201ENST00000339488 DKK4Q9UBT3 224 aa7.08□□□□□ -1.28
PTCHD4-201ENST00000339488 CUBNO60494 3623 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 A0A0J9YX75 114 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 SLPIP03973 132 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 CCKP06307 115 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 POLR2KP53803 58 aaKnown RBP7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 A0A087WYN8 130 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 NDUFC2-KCTD14E9PQ53 114 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 PMAIP1Q13794 54 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 ZFAND3Q9H8U3 227 aa7.07□□□□□ -1.28
PTCHD4-201ENST00000339488 IGLV4-3A0A075B6K6 122 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 A0A087WZ39 114 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 M0R1B8 84 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 LINC00574Q9H8X3 128 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 KLK9Q9UKQ9 250 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 C20orf173Q96LM9 149 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 DOPEY2Q9Y3R5 2298 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 VCYO14598 125 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 RNASE4P34096 147 aaKnown RBP7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 LINC00315P59091 139 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 COL12A1Q99715 3063 aa7.06□□□□□ -1.28
PTCHD4-201ENST00000339488 F6UB75 175 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 CD28P10747 220 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 IGKV3-7A0A075B6H7 116 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 RNASE3P12724 160 aaKnown RBP7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 C6orf226Q5I0X4 101 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 LINC00308Q8TCZ7 52 aa7.05□□□□□ -1.28
PTCHD4-201ENST00000339488 IGHV1-3A0A0C4DH29 117 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 IGHV1-58A0A0C4DH39 117 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 TMEM89A2RUT3 159 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 IGHV1-46P01743 117 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 PIK3CD-AS1Q5SR53 167 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 U3KQE9 123 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 COL27A1Q8IZC6 1860 aaPredicted RBP7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 MOB4Q9Y3A3 225 aa7.04□□□□□ -1.28
PTCHD4-201ENST00000339488 ASH1LQ9NR48 2969 aaKnown RBP7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 NCOR2Q9Y618 2525 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 CTSGP08311 255 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 VSIG2Q96IQ7 327 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 CHD8Q9HCK8 2581 aa7.03□□□□□ -1.28
PTCHD4-201ENST00000339488 KIF25-AS1Q9Y6Z4 181 aa7.02□□□□□ -1.28
PTCHD4-201ENST00000339488 DEFB124Q8NES8 71 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 TRAV10A0A0B4J240 114 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 LRCOL1A6NCL2 159 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 PAX4O43316 350 aa7.02□□□□□ -1.29
PTCHD4-201ENST00000339488 IGHV1-69P01742 117 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms