RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 TENM3Q9P273 2699 aa10.36□□□□□ -0.75
CBX3-201ENST00000337620 HTN3P15516 51 aa10.35□□□□□ -0.75
CBX3-201ENST00000337620 C2orf66Q6UXQ4 117 aa10.35□□□□□ -0.75
CBX3-201ENST00000337620 PRO0255Q9UI72 69 aa10.35□□□□□ -0.75
CBX3-201ENST00000337620 CRYBA4P53673 196 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 TOMM6Q96B49 74 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 F5H768 121 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 G0S2P27469 103 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 UBE2D3P61077 147 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 UBE2D2P62837 147 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 C12orf74Q32Q52 190 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 IFI27L1Q96BM0 104 aa10.34□□□□□ -0.75
CBX3-201ENST00000337620 SYS1-DBNDD2H3BUS1 97 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 RPL39P62891 51 aaKnown RBP10.33□□□□□ -0.76
CBX3-201ENST00000337620 COTL1Q14019 142 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 SCGB3A1Q96QR1 104 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 HUWE1Q7Z6Z7 4374 aaKnown RBP10.33□□□□□ -0.76
CBX3-201ENST00000337620 PAX4O43316 350 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 CDPF1Q6NVV7 123 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 DAZ4Q86SG3 579 aaKnown RBP10.33□□□□□ -0.76
CBX3-201ENST00000337620 ZMAT4Q9H898 229 aa10.33□□□□□ -0.76
CBX3-201ENST00000337620 DAZ3Q9NR90 486 aaKnown RBP10.33□□□□□ -0.76
CBX3-201ENST00000337620 A0A0J9YY99 117 aa10.32□□□□□ -0.76
CBX3-201ENST00000337620 GYPEP15421 78 aa10.32□□□□□ -0.76
CBX3-201ENST00000337620 ATP5LO75964 103 aa10.31□□□□□ -0.76
CBX3-201ENST00000337620 SPATA12Q7Z6I5 190 aa10.31□□□□□ -0.76
CBX3-201ENST00000337620 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.31□□□□□ -0.76
CBX3-201ENST00000337620 Q8N976 141 aa10.31□□□□□ -0.76
CBX3-201ENST00000337620 TRAV26-1A0A087WT03 109 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 PRSS1P07477 247 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 C20orf203Q8NBC4 194 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 ERASQ7Z444 233 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 C11orf45Q8TAV5 145 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 VSIG2Q96IQ7 327 aa10.3□□□□□ -0.76
CBX3-201ENST00000337620 NANOS2P60321 138 aaKnown RBP10.29□□□□□ -0.76
CBX3-201ENST00000337620 Q6ZN92 141 aa10.29□□□□□ -0.76
CBX3-201ENST00000337620 Q6ZTC4 211 aa10.29□□□□□ -0.76
CBX3-201ENST00000337620 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
CBX3-201ENST00000337620 CHCHD7Q9BUK0 85 aa10.29□□□□□ -0.76
CBX3-201ENST00000337620 LINC01549A6NIU2 74 aa10.28□□□□□ -0.76
CBX3-201ENST00000337620 DNAH9Q9NYC9 4486 aa10.28□□□□□ -0.76
CBX3-201ENST00000337620 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.28□□□□□ -0.76
CBX3-201ENST00000337620 A0A096LPF7 62 aa10.28□□□□□ -0.76
CBX3-201ENST00000337620 C20orf202A1L168 122 aa10.28□□□□□ -0.76
CBX3-201ENST00000337620 IGKV2-29A2NJV5 120 aaPredicted RBP10.28□□□□□ -0.76
CBX3-201ENST00000337620 NTM-AS1Q6ZSK4 140 aa10.28□□□□□ -0.76
CBX3-201ENST00000337620 B9D2Q9BPU9 175 aa10.28□□□□□ -0.76
CBX3-201ENST00000337620 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
CBX3-201ENST00000337620 LINC00694P0DN24 101 aa10.27□□□□□ -0.77
CBX3-201ENST00000337620 ATOH7Q8N100 152 aa10.27□□□□□ -0.77
CBX3-201ENST00000337620 ATP6V0E2Q8NHE4 81 aa10.27□□□□□ -0.77
CBX3-201ENST00000337620 LINC01545Q5VT33 79 aa10.26□□□□□ -0.77
CBX3-201ENST00000337620 GTSF1LQ9H1H1 148 aa10.26□□□□□ -0.77
CBX3-201ENST00000337620 DEFA6Q01524 100 aa10.25□□□□□ -0.77
CBX3-201ENST00000337620 TMEM141Q96I45 108 aa10.25□□□□□ -0.77
CBX3-201ENST00000337620 TIMM17AQ99595 171 aa10.25□□□□□ -0.77
CBX3-201ENST00000337620 LGALS9CQ6DKI2 356 aa10.25□□□□□ -0.77
CBX3-201ENST00000337620 CEMP1Q6PRD7 247 aaPredicted RBP10.25□□□□□ -0.77
CBX3-201ENST00000337620 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
CBX3-201ENST00000337620 OPRPNQ99935 248 aaPredicted RBP10.25□□□□□ -0.77
CBX3-201ENST00000337620 TRBV25-1A0A075B6N4 114 aa10.24□□□□□ -0.77
CBX3-201ENST00000337620 TEX43Q6ZNM6 134 aa10.24□□□□□ -0.77
CBX3-201ENST00000337620 COL7A1Q02388 2944 aa10.24□□□□□ -0.77
CBX3-201ENST00000337620 DEFB131BA0A096LNP1 70 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 TRBV6-8A0A0A6YYG3 113 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 ODF1Q14990 250 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 MRPL23Q16540 153 aaKnown RBP10.23□□□□□ -0.77
CBX3-201ENST00000337620 ZC2HC1BQ5TFG8 222 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 TMEM243Q9BU79 118 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 UBE2D4Q9Y2X8 147 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 ICOSQ9Y6W8 199 aa10.23□□□□□ -0.77
CBX3-201ENST00000337620 UBE2L6O14933 153 aa10.22□□□□□ -0.77
CBX3-201ENST00000337620 TMEM97Q5BJF2 176 aa10.22□□□□□ -0.77
CBX3-201ENST00000337620 PYGO1Q9Y3Y4 419 aa10.22□□□□□ -0.77
CBX3-201ENST00000337620 A0A087WX48 190 aa10.22□□□□□ -0.77
CBX3-201ENST00000337620 PRSS29PA6NIE9 313 aa10.22□□□□□ -0.77
CBX3-201ENST00000337620 VAMP8Q9BV40 100 aa10.22□□□□□ -0.77
CBX3-201ENST00000337620 MEGF8Q7Z7M0 2845 aa10.21□□□□□ -0.77
CBX3-201ENST00000337620 IGLV4-3A0A075B6K6 122 aa10.21□□□□□ -0.77
CBX3-201ENST00000337620 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
CBX3-201ENST00000337620 DGAT2L7PQ6IED9 249 aa10.21□□□□□ -0.77
CBX3-201ENST00000337620 SPANXA1Q9NS26 97 aa10.21□□□□□ -0.77
CBX3-201ENST00000337620 PAM16Q9Y3D7 125 aa10.21□□□□□ -0.77
CBX3-201ENST00000337620 FGF6P10767 208 aa10.21□□□□□ -0.78
CBX3-201ENST00000337620 PMVKQ15126 192 aa10.21□□□□□ -0.78
CBX3-201ENST00000337620 MAJINQ3KP22 176 aa10.21□□□□□ -0.78
CBX3-201ENST00000337620 CHCHD5Q9BSY4 110 aa10.21□□□□□ -0.78
CBX3-201ENST00000337620 VCX2Q9H322 139 aa10.21□□□□□ -0.78
CBX3-201ENST00000337620 MRPL35Q9NZE8 188 aaKnown RBP10.21□□□□□ -0.78
CBX3-201ENST00000337620 CHTOPQ9Y3Y2 248 aaKnown RBP10.21□□□□□ -0.78
CBX3-201ENST00000337620 RNASE13Q5GAN3 156 aaKnown RBP10.2□□□□□ -0.78
CBX3-201ENST00000337620 CST9LQ9H4G1 147 aa10.2□□□□□ -0.78
CBX3-201ENST00000337620 GAGE6Q13070 117 aa10.19□□□□□ -0.78
CBX3-201ENST00000337620 PAPPA-AS1Q5QFB9 102 aa10.19□□□□□ -0.78
CBX3-201ENST00000337620 AMMECR1LQ6DCA0 310 aa10.19□□□□□ -0.78
CBX3-201ENST00000337620 hDV102S1A0JD36 115 aa10.19□□□□□ -0.78
CBX3-201ENST00000337620 SH2D6Q7Z4S9 175 aa10.19□□□□□ -0.78
CBX3-201ENST00000337620 ZNF664Q8N3J9 261 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms