RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 RPL11P62913 178 aaKnown RBP18.01■□□□□ 0.47
SOX1-201ENST00000330949 KLLNB2CW77 178 aa18■□□□□ 0.47
SOX1-201ENST00000330949 NPC2P61916 151 aa18■□□□□ 0.47
SOX1-201ENST00000330949 COX7CP15954 63 aa17.99■□□□□ 0.47
SOX1-201ENST00000330949 FAM19A5Q7Z5A7 132 aaPredicted RBP17.99■□□□□ 0.47
SOX1-201ENST00000330949 SDIM1Q6ZPB5 146 aa17.98■□□□□ 0.47
SOX1-201ENST00000330949 ADORA2A-AS1P86434 159 aa17.97■□□□□ 0.47
SOX1-201ENST00000330949 TIMM17BO60830 172 aa17.97■□□□□ 0.47
SOX1-201ENST00000330949 CD28P10747 220 aa17.97■□□□□ 0.47
SOX1-201ENST00000330949 RPS28P62857 69 aaKnown RBP17.97■□□□□ 0.47
SOX1-201ENST00000330949 DUX5Q96PT3 197 aa17.97■□□□□ 0.47
SOX1-201ENST00000330949 PYGO1Q9Y3Y4 419 aa17.97■□□□□ 0.47
SOX1-201ENST00000330949 VSIG2Q96IQ7 327 aa17.96■□□□□ 0.47
SOX1-201ENST00000330949 C5orf38Q86SI9 138 aa17.96■□□□□ 0.47
SOX1-201ENST00000330949 TMEM219Q86XT9 240 aa17.96■□□□□ 0.47
SOX1-201ENST00000330949 IGHV3OR16-10A0A075B7F0 116 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 UNQ9165/PRO28630Q6UXU0 137 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 KLK5Q9Y337 293 aaPredicted RBP17.95■□□□□ 0.46
SOX1-201ENST00000330949 FAM223BA6NKX1 122 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 CRYGAP11844 174 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 GAGE2AQ6NT46 116 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 FAM223AQ8IWN6 122 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 PEMTQ9UBM1 199 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 ITPR1Q14643 2758 aa17.95■□□□□ 0.46
SOX1-201ENST00000330949 A0A1W2PPR1 153 aa17.94■□□□□ 0.46
SOX1-201ENST00000330949 NDUFA4O00483 81 aa17.94■□□□□ 0.46
SOX1-201ENST00000330949 C9orf85Q96MD7 179 aa17.94■□□□□ 0.46
SOX1-201ENST00000330949 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.93■□□□□ 0.46
SOX1-201ENST00000330949 COX7A2LO14548 114 aa17.93■□□□□ 0.46
SOX1-201ENST00000330949 OR13C6PQ8NH95 151 aa17.93■□□□□ 0.46
SOX1-201ENST00000330949 CELSR2Q9HCU4 2923 aa17.93■□□□□ 0.46
SOX1-201ENST00000330949 CRYBG3Q68DQ2 2970 aa17.91■□□□□ 0.46
SOX1-201ENST00000330949 TRAV12-3A0A0B4J271 114 aa17.91■□□□□ 0.46
SOX1-201ENST00000330949 ATOX1O00244 68 aa17.9■□□□□ 0.46
SOX1-201ENST00000330949 IGKV3-7A0A075B6H7 116 aa17.9■□□□□ 0.46
SOX1-201ENST00000330949 IGHV3-16A0A0C4DH30 117 aa17.9■□□□□ 0.46
SOX1-201ENST00000330949 TINCRA0A1B0GVN0 87 aa17.9■□□□□ 0.46
SOX1-201ENST00000330949 DAZ2Q13117 558 aaKnown RBP17.9■□□□□ 0.46
SOX1-201ENST00000330949 DAZ4Q86SG3 579 aaKnown RBP17.9■□□□□ 0.46
SOX1-201ENST00000330949 CITED2Q99967 270 aaPredicted RBP17.9■□□□□ 0.46
SOX1-201ENST00000330949 UBTD1Q9HAC8 227 aa17.9■□□□□ 0.46
SOX1-201ENST00000330949 DAZ1Q9NQZ3 744 aaKnown RBP17.9■□□□□ 0.46
SOX1-201ENST00000330949 DAZ3Q9NR90 486 aaKnown RBP17.9■□□□□ 0.46
SOX1-201ENST00000330949 C2orf48Q96LS8 159 aa17.9■□□□□ 0.46
SOX1-201ENST00000330949 DAND5Q8N907 189 aa17.89■□□□□ 0.45
SOX1-201ENST00000330949 EDA2RQ9HAV5 297 aa17.89■□□□□ 0.45
SOX1-201ENST00000330949 CSMD2Q7Z408 3487 aa17.88■□□□□ 0.45
SOX1-201ENST00000330949 TRAV41A0A0B4J266 112 aa17.87■□□□□ 0.45
SOX1-201ENST00000330949 FAM104AQ969W3 186 aa17.87■□□□□ 0.45
SOX1-201ENST00000330949 A8MZ25 164 aa17.87■□□□□ 0.45
SOX1-201ENST00000330949 CIRBPQ14011 172 aaKnown RBP17.87■□□□□ 0.45
SOX1-201ENST00000330949 TRACP01848 142 aa17.86■□□□□ 0.45
SOX1-201ENST00000330949 HIST1H4AP62805 103 aaKnown RBP17.86■□□□□ 0.45
SOX1-201ENST00000330949 WIPF1O43516 503 aa17.86■□□□□ 0.45
SOX1-201ENST00000330949 INAFM2P0DMQ5 153 aa17.86■□□□□ 0.45
SOX1-201ENST00000330949 SAA4P35542 130 aa17.86■□□□□ 0.45
SOX1-201ENST00000330949 C11orf71Q6IPW1 123 aa17.85■□□□□ 0.45
SOX1-201ENST00000330949 TRBV12-3P01733 135 aa17.85■□□□□ 0.45
SOX1-201ENST00000330949 SIRPDQ9H106 197 aa17.85■□□□□ 0.45
SOX1-201ENST00000330949 C5orf56Q8N8D9 126 aa17.85■□□□□ 0.45
SOX1-201ENST00000330949 BAALC-AS2P0C853 105 aa17.84■□□□□ 0.45
SOX1-201ENST00000330949 FBXL19-AS1Q494R0 122 aa17.83■□□□□ 0.45
SOX1-201ENST00000330949 RHPN1-AS1Q9BWJ2 59 aa17.83■□□□□ 0.45
SOX1-201ENST00000330949 CSPG4Q6UVK1 2322 aa17.83■□□□□ 0.44
SOX1-201ENST00000330949 NDUFA1O15239 70 aa17.82■□□□□ 0.44
SOX1-201ENST00000330949 TIRAPP58753 221 aa17.82■□□□□ 0.44
SOX1-201ENST00000330949 FAM222AQ5U5X8 452 aa17.82■□□□□ 0.44
SOX1-201ENST00000330949 RNASE13Q5GAN3 156 aaKnown RBP17.82■□□□□ 0.44
SOX1-201ENST00000330949 hADV29S1A0JD25 119 aa17.81■□□□□ 0.44
SOX1-201ENST00000330949 COPS9Q8WXC6 57 aa17.81■□□□□ 0.44
SOX1-201ENST00000330949 BPESC1Q9GZL8 116 aa17.81■□□□□ 0.44
SOX1-201ENST00000330949 LINC00308Q8TCZ7 52 aa17.81■□□□□ 0.44
SOX1-201ENST00000330949 UTP20O75691 2785 aaKnown RBP17.81■□□□□ 0.44
SOX1-201ENST00000330949 CUBNO60494 3623 aa17.81■□□□□ 0.44
SOX1-201ENST00000330949 BEAN1Q3B7T3 259 aa17.8■□□□□ 0.44
SOX1-201ENST00000330949 C19orf54Q5BKX5 351 aa17.8■□□□□ 0.44
SOX1-201ENST00000330949 CENPEQ02224 2701 aa17.79■□□□□ 0.44
SOX1-201ENST00000330949 TMEM258P61165 79 aa17.79■□□□□ 0.44
SOX1-201ENST00000330949 KLRB1Q12918 225 aa17.78■□□□□ 0.44
SOX1-201ENST00000330949 BRD3OSQ6XYD6 125 aa17.78■□□□□ 0.44
SOX1-201ENST00000330949 TRAV25A0A0B4J276 109 aa17.77■□□□□ 0.44
SOX1-201ENST00000330949 IGHV1OR15-1A0A075B7D0 117 aa17.76■□□□□ 0.43
SOX1-201ENST00000330949 RPL18AQ02543 176 aaKnown RBP17.76■□□□□ 0.43
SOX1-201ENST00000330949 DOPEY2Q9Y3R5 2298 aa17.75■□□□□ 0.43
SOX1-201ENST00000330949 MOB4Q9Y3A3 225 aa17.75■□□□□ 0.43
SOX1-201ENST00000330949 C22orf24Q9Y442 160 aa17.75■□□□□ 0.43
SOX1-201ENST00000330949 NACAE9PAV3 2078 aa17.75■□□□□ 0.43
SOX1-201ENST00000330949 USMG5Q96IX5 58 aa17.74■□□□□ 0.43
SOX1-201ENST00000330949 UBE2D4Q9Y2X8 147 aa17.74■□□□□ 0.43
SOX1-201ENST00000330949 TRAV12-2A0A075B6T6 113 aa17.74■□□□□ 0.43
SOX1-201ENST00000330949 Q8N2B8 174 aa17.73■□□□□ 0.43
SOX1-201ENST00000330949 DPH3Q96FX2 82 aa17.73■□□□□ 0.43
SOX1-201ENST00000330949 FLNCQ14315 2725 aa17.73■□□□□ 0.43
SOX1-201ENST00000330949 ABCA2Q9BZC7 2435 aa17.73■□□□□ 0.43
SOX1-201ENST00000330949 CDKN2A-AS1Q9UH64 79 aa17.73■□□□□ 0.43
SOX1-201ENST00000330949 IGHV3-11P01762 117 aa17.72■□□□□ 0.43
SOX1-201ENST00000330949 LY6EQ16553 131 aa17.72■□□□□ 0.43
SOX1-201ENST00000330949 CFAP46Q8IYW2 2715 aa17.71■□□□□ 0.43
SOX1-201ENST00000330949 CREBBPQ92793 2442 aa17.71■□□□□ 0.43
SOX1-201ENST00000330949 SERP2Q8N6R1 65 aa17.71■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms