RNA–Protein interactions for RNA: ENST00000324685.10

RNF40-201, Transcript of ring finger protein 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF40, Length 5,634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-201ENST00000324685 MBD6Q96DN6 1003 aa15.79■□□□□ 0.12
RNF40-201ENST00000324685 BRWD1-AS2P59051 145 aa15.79■□□□□ 0.12
RNF40-201ENST00000324685 C20orf173Q96LM9 149 aa15.79■□□□□ 0.12
RNF40-201ENST00000324685 FSTL3O95633 263 aa15.78■□□□□ 0.12
RNF40-201ENST00000324685 TRBV30A0A0K0K1B3 111 aa15.78■□□□□ 0.12
RNF40-201ENST00000324685 LINC01548A6NM66 108 aa15.78■□□□□ 0.12
RNF40-201ENST00000324685 DEFB114Q30KQ6 69 aa15.78■□□□□ 0.12
RNF40-201ENST00000324685 U3KQK5 164 aa15.78■□□□□ 0.12
RNF40-201ENST00000324685 NCOR1O75376 2440 aa15.78■□□□□ 0.12
RNF40-201ENST00000324685 CRYGDP07320 174 aa15.77■□□□□ 0.12
RNF40-201ENST00000324685 C3orf22Q8N5N4 141 aa15.76■□□□□ 0.11
RNF40-201ENST00000324685 Q8NA96 180 aa15.76■□□□□ 0.11
RNF40-201ENST00000324685 DENND4CQ5VZ89 1909 aa15.76■□□□□ 0.11
RNF40-201ENST00000324685 PLXNB3Q9ULL4 1909 aa15.76■□□□□ 0.11
RNF40-201ENST00000324685 EIF4EBP1Q13541 118 aaPredicted RBP15.76■□□□□ 0.11
RNF40-201ENST00000324685 ENHOQ6UWT2 76 aa15.75■□□□□ 0.11
RNF40-201ENST00000324685 CFAP126Q5VTH2 177 aa15.75■□□□□ 0.11
RNF40-201ENST00000324685 ZNF295-AS1Q8N0V1 137 aa15.74■□□□□ 0.11
RNF40-201ENST00000324685 SPTSSBQ8NFR3 76 aa15.74■□□□□ 0.11
RNF40-201ENST00000324685 TRIAP1O43715 76 aa15.74■□□□□ 0.11
RNF40-201ENST00000324685 CHD3Q12873 2000 aaKnown RBP15.74■□□□□ 0.11
RNF40-201ENST00000324685 NACAE9PAV3 2078 aa15.74■□□□□ 0.11
RNF40-201ENST00000324685 M0QY20 66 aa15.74■□□□□ 0.11
RNF40-201ENST00000324685 HILS1P60008 231 aa15.74■□□□□ 0.11
RNF40-201ENST00000324685 TRBV6-4A0A1B0GX49 114 aa15.73■□□□□ 0.11
RNF40-201ENST00000324685 NDUFC2-KCTD14E9PQ53 114 aa15.73■□□□□ 0.11
RNF40-201ENST00000324685 TRBV6-8A0A0A6YYG3 113 aa15.72■□□□□ 0.11
RNF40-201ENST00000324685 SLPIP03973 132 aa15.72■□□□□ 0.11
RNF40-201ENST00000324685 OBSL1O75147 1896 aa15.72■□□□□ 0.11
RNF40-201ENST00000324685 IGHV4-31P0DP07 118 aa15.71■□□□□ 0.11
RNF40-201ENST00000324685 ZFAND3Q9H8U3 227 aa15.71■□□□□ 0.11
RNF40-201ENST00000324685 MPLKIPQ8TAP9 179 aa15.71■□□□□ 0.11
RNF40-201ENST00000324685 EBI3Q14213 229 aa15.71■□□□□ 0.11
RNF40-201ENST00000324685 RNF185Q96GF1 192 aa15.71■□□□□ 0.11
RNF40-201ENST00000324685 Q6ZPA2 131 aa15.71■□□□□ 0.11
RNF40-201ENST00000324685 TIMM17BO60830 172 aa15.71■□□□□ 0.1
RNF40-201ENST00000324685 PYGO1Q9Y3Y4 419 aa15.71■□□□□ 0.1
RNF40-201ENST00000324685 DEFB131BA0A096LNP1 70 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 C1orf229Q6ZS94 237 aaPredicted RBP15.7■□□□□ 0.1
RNF40-201ENST00000324685 SCXQ7RTU7 201 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 GTF3C1Q12789 2109 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 A0A087WZ39 114 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 MAPKAPK5-AS1Q8N8E1 139 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 FAM240AA0A1B0GVK7 77 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 ATP5EP56381 51 aaPredicted RBP15.7■□□□□ 0.1
RNF40-201ENST00000324685 PIK3CD-AS1Q5SR53 167 aa15.7■□□□□ 0.1
RNF40-201ENST00000324685 COL4A3Q01955 1670 aa15.69■□□□□ 0.1
RNF40-201ENST00000324685 WISP2O76076 250 aa15.69■□□□□ 0.1
RNF40-201ENST00000324685 MIFP14174 115 aa15.69■□□□□ 0.1
RNF40-201ENST00000324685 MED13Q9UHV7 2174 aa15.68■□□□□ 0.1
RNF40-201ENST00000324685 K7ERS5 55 aa15.68■□□□□ 0.1
RNF40-201ENST00000324685 LY6LH3BQJ8 138 aa15.68■□□□□ 0.1
RNF40-201ENST00000324685 CRIP1P50238 77 aa15.68■□□□□ 0.1
RNF40-201ENST00000324685 TRBV6-5A0A0K0K1A5 114 aa15.67■□□□□ 0.1
RNF40-201ENST00000324685 V9GYY9 64 aa15.67■□□□□ 0.1
RNF40-201ENST00000324685 NOTCH4Q99466 2003 aa15.67■□□□□ 0.1
RNF40-201ENST00000324685 PRR15LQ9BU68 103 aa15.66■□□□□ 0.1
RNF40-201ENST00000324685 SPTAN1Q13813 2472 aaKnown RBP15.66■□□□□ 0.1
RNF40-201ENST00000324685 A0A096LNI7 61 aa15.66■□□□□ 0.1
RNF40-201ENST00000324685 TRBV27A0A0K0K1C4 114 aa15.66■□□□□ 0.1
RNF40-201ENST00000324685 PLA2G5P39877 138 aa15.66■□□□□ 0.1
RNF40-201ENST00000324685 FAM19A5Q7Z5A7 132 aaPredicted RBP15.66■□□□□ 0.1
RNF40-201ENST00000324685 NDUFC1O43677 76 aa15.65■□□□□ 0.1
RNF40-201ENST00000324685 SYCNQ0VAF6 134 aa15.65■□□□□ 0.1
RNF40-201ENST00000324685 C6orf99Q4VX62 202 aa15.64■□□□□ 0.09
RNF40-201ENST00000324685 CCKP06307 115 aa15.64■□□□□ 0.09
RNF40-201ENST00000324685 CRIP3Q6Q6R5 217 aa15.64■□□□□ 0.09
RNF40-201ENST00000324685 WFDC10BQ8IUB3 73 aa15.64■□□□□ 0.09
RNF40-201ENST00000324685 TP73-AS1Q9UF72 201 aa15.64■□□□□ 0.09
RNF40-201ENST00000324685 MRPL55Q7Z7F7 128 aaKnown RBP15.63■□□□□ 0.09
RNF40-201ENST00000324685 PRORYQ9H606 182 aa15.63■□□□□ 0.09
RNF40-201ENST00000324685 DYSFO75923 2080 aa15.63■□□□□ 0.09
RNF40-201ENST00000324685 GPR179Q6PRD1 2367 aa15.62■□□□□ 0.09
RNF40-201ENST00000324685 MRPS12O15235 138 aaKnown RBP15.62■□□□□ 0.09
RNF40-201ENST00000324685 IMUPQ9GZP8 106 aa15.62■□□□□ 0.09
RNF40-201ENST00000324685 XAGE1AQ9HD64 81 aa15.62■□□□□ 0.09
RNF40-201ENST00000324685 C19orf84I3L1E1 186 aa15.62■□□□□ 0.09
RNF40-201ENST00000324685 YPEL4Q96NS1 127 aa15.62■□□□□ 0.09
RNF40-201ENST00000324685 DHRS4-AS1Q9P1J3 65 aa15.62■□□□□ 0.09
RNF40-201ENST00000324685 TSHBP01222 138 aa15.6■□□□□ 0.09
RNF40-201ENST00000324685 IGLV2-11P01706 119 aa15.59■□□□□ 0.09
RNF40-201ENST00000324685 C1orf158Q8N1D5 194 aa15.59■□□□□ 0.09
RNF40-201ENST00000324685 CD164L2Q6UWJ8 174 aa15.59■□□□□ 0.09
RNF40-201ENST00000324685 M0R378 163 aa15.59■□□□□ 0.09
RNF40-201ENST00000324685 SERP2Q8N6R1 65 aa15.59■□□□□ 0.09
RNF40-201ENST00000324685 ZNF706Q9Y5V0 76 aaPredicted RBP15.59■□□□□ 0.09
RNF40-201ENST00000324685 PROK1P58294 105 aa15.58■□□□□ 0.09
RNF40-201ENST00000324685 DCANP1Q8TF63 244 aa15.58■□□□□ 0.08
RNF40-201ENST00000324685 Q6ZSV7 163 aa15.58■□□□□ 0.08
RNF40-201ENST00000324685 NRACQ8N912 160 aa15.57■□□□□ 0.08
RNF40-201ENST00000324685 LRCOL1A6NCL2 159 aa15.57■□□□□ 0.08
RNF40-201ENST00000324685 KIF26AQ9ULI4 1882 aaPredicted RBP15.57■□□□□ 0.08
RNF40-201ENST00000324685 MRPS36P82909 103 aaKnown RBP15.56■□□□□ 0.08
RNF40-201ENST00000324685 C7orf33Q8WU49 177 aa15.56■□□□□ 0.08
RNF40-201ENST00000324685 DENND4AQ7Z401 1863 aa15.56■□□□□ 0.08
RNF40-201ENST00000324685 LST1O00453 97 aa15.56■□□□□ 0.08
RNF40-201ENST00000324685 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.56■□□□□ 0.08
RNF40-201ENST00000324685 RBX1P62877 108 aa15.56■□□□□ 0.08
RNF40-201ENST00000324685 TRAV10A0A0B4J240 114 aa15.56■□□□□ 0.08
RNF40-201ENST00000324685 Q8N976 141 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms