RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 HLA-DQA1P01909 254 aa13.93□□□□□ -0.18
UBE2D3-201ENST00000321805 SMR3BP02814 79 aaPredicted RBP13.93□□□□□ -0.18
UBE2D3-201ENST00000321805 HAMPP81172 84 aa13.93□□□□□ -0.18
UBE2D3-201ENST00000321805 BORCS7Q96B45 105 aa13.93□□□□□ -0.18
UBE2D3-201ENST00000321805 TRAV8-4A0A0B4J246 113 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 UBE2L6O14933 153 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 SRP19P09132 144 aaKnown RBP13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 INAFM2P0DMQ5 153 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 AMTP48728 403 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 REG3AQ06141 175 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 C20orf203Q8NBC4 194 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 TSKUQ8WUA8 353 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 OSTCQ9NRP0 149 aa13.92□□□□□ -0.18
UBE2D3-201ENST00000321805 USP17L23D6RBM5 183 aa13.91□□□□□ -0.18
UBE2D3-201ENST00000321805 NCR2O95944 276 aa13.91□□□□□ -0.18
UBE2D3-201ENST00000321805 KRTAP26-1Q6PEX3 210 aa13.91□□□□□ -0.18
UBE2D3-201ENST00000321805 CLPSL2Q6UWE3 100 aa13.91□□□□□ -0.18
UBE2D3-201ENST00000321805 TRAV26-2A0A0B4J265 109 aa13.9□□□□□ -0.18
UBE2D3-201ENST00000321805 FAM74A3Q4VXF1 159 aa13.9□□□□□ -0.18
UBE2D3-201ENST00000321805 A0A1B0GUT8 65 aa13.89□□□□□ -0.19
UBE2D3-201ENST00000321805 HIGD1CA8MV81 97 aa13.89□□□□□ -0.19
UBE2D3-201ENST00000321805 IGLV4-60A0A075B6I1 120 aa13.88□□□□□ -0.19
UBE2D3-201ENST00000321805 DGAT2L7PQ6IED9 249 aa13.88□□□□□ -0.19
UBE2D3-201ENST00000321805 TRBV6-5A0A0K0K1A5 114 aa13.87□□□□□ -0.19
UBE2D3-201ENST00000321805 H7C423 109 aa13.87□□□□□ -0.19
UBE2D3-201ENST00000321805 LINC01620Q4KN68 170 aa13.87□□□□□ -0.19
UBE2D3-201ENST00000321805 CLRN3Q8NCR9 226 aa13.87□□□□□ -0.19
UBE2D3-201ENST00000321805 RPL39LQ96EH5 51 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-201ENST00000321805 TMEM191AQ9H0A3 160 aa13.87□□□□□ -0.19
UBE2D3-201ENST00000321805 SDHAF1A6NFY7 115 aa13.86□□□□□ -0.19
UBE2D3-201ENST00000321805 SRRM2Q9UQ35 2752 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-201ENST00000321805 APCSP02743 223 aa13.85□□□□□ -0.19
UBE2D3-201ENST00000321805 TMEM241Q24JQ0 296 aa13.85□□□□□ -0.19
UBE2D3-201ENST00000321805 CHAC1Q9BUX1 264 aa13.85□□□□□ -0.19
UBE2D3-201ENST00000321805 SMDT1Q9H4I9 107 aa13.85□□□□□ -0.19
UBE2D3-201ENST00000321805 PLA2G1BP04054 148 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-201ENST00000321805 PRSS1P07477 247 aa13.84□□□□□ -0.19
UBE2D3-201ENST00000321805 SCXQ7RTU7 201 aa13.84□□□□□ -0.19
UBE2D3-201ENST00000321805 ISOC2Q96AB3 205 aa13.84□□□□□ -0.19
UBE2D3-201ENST00000321805 V9GYV3 84 aa13.84□□□□□ -0.19
UBE2D3-201ENST00000321805 IGLV10-54A0A075B6I4 117 aa13.83□□□□□ -0.2
UBE2D3-201ENST00000321805 I3L3M4 83 aa13.83□□□□□ -0.2
UBE2D3-201ENST00000321805 DEFB104AQ8WTQ1 72 aa13.83□□□□□ -0.2
UBE2D3-201ENST00000321805 MRAP2Q96G30 205 aa13.83□□□□□ -0.2
UBE2D3-201ENST00000321805 PEA15Q15121 130 aa13.82□□□□□ -0.2
UBE2D3-201ENST00000321805 AMMECR1LQ6DCA0 310 aa13.82□□□□□ -0.2
UBE2D3-201ENST00000321805 LINC00528Q8N1L1 170 aa13.82□□□□□ -0.2
UBE2D3-201ENST00000321805 NAT8Q9UHE5 227 aa13.82□□□□□ -0.2
UBE2D3-201ENST00000321805 ZNF25P17030 456 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-201ENST00000321805 RPL23P62829 140 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-201ENST00000321805 RIGQ13278 110 aa13.81□□□□□ -0.2
UBE2D3-201ENST00000321805 C9orf163Q8N9P6 203 aa13.81□□□□□ -0.2
UBE2D3-201ENST00000321805 ST20Q9HBF5 79 aa13.81□□□□□ -0.2
UBE2D3-201ENST00000321805 MYCBP2O75592 4640 aa13.81□□□□□ -0.2
UBE2D3-201ENST00000321805 PMCHP20382 165 aa13.8□□□□□ -0.2
UBE2D3-201ENST00000321805 CNBPP62633 177 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-201ENST00000321805 NUP35Q8NFH5 326 aa13.8□□□□□ -0.2
UBE2D3-201ENST00000321805 RNF185Q96GF1 192 aa13.8□□□□□ -0.2
UBE2D3-201ENST00000321805 NAT8BQ9UHF3 227 aa13.8□□□□□ -0.2
UBE2D3-201ENST00000321805 RAB4AP20338 218 aa13.79□□□□□ -0.2
UBE2D3-201ENST00000321805 FLG2Q5D862 2391 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 DMBT1Q9UGM3 2413 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 PPP1R17O96001 155 aa13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 FGF6P10767 208 aa13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 ADIRFQ15847 76 aa13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 RNASEKQ6P5S7 137 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 CIRBP-AS1Q8TBR5 109 aa13.78□□□□□ -0.2
UBE2D3-201ENST00000321805 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-201ENST00000321805 TRBV27A0A0K0K1C4 114 aa13.77□□□□□ -0.21
UBE2D3-201ENST00000321805 IGKV2-29A2NJV5 120 aaPredicted RBP13.77□□□□□ -0.21
UBE2D3-201ENST00000321805 C9JQL5 133 aa13.77□□□□□ -0.21
UBE2D3-201ENST00000321805 POLR2KP53803 58 aaKnown RBP13.77□□□□□ -0.21
UBE2D3-201ENST00000321805 AMN1Q8IY45 258 aa13.77□□□□□ -0.21
UBE2D3-201ENST00000321805 hDV102S1A0JD36 115 aa13.76□□□□□ -0.21
UBE2D3-201ENST00000321805 ESDP10768 282 aa13.76□□□□□ -0.21
UBE2D3-201ENST00000321805 BTF3L4Q96K17 158 aa13.76□□□□□ -0.21
UBE2D3-201ENST00000321805 AP5S1Q9NUS5 200 aa13.76□□□□□ -0.21
UBE2D3-201ENST00000321805 SMIM27A0A1W2PRY6 76 aa13.75□□□□□ -0.21
UBE2D3-201ENST00000321805 GAS8-AS1O95177 125 aa13.75□□□□□ -0.21
UBE2D3-201ENST00000321805 TSHBP01222 138 aa13.75□□□□□ -0.21
UBE2D3-201ENST00000321805 CFAP161Q6P656 301 aa13.75□□□□□ -0.21
UBE2D3-201ENST00000321805 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 A0A1B0GW15 77 aa13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 RPS10P46783 165 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 SRSF3P84103 164 aaKnown RBP13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 TMEM101Q96IK0 257 aa13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 TMEM242Q9NWH2 141 aa13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 HERC1Q15751 4861 aa13.74□□□□□ -0.21
UBE2D3-201ENST00000321805 GAGE12HA6NDE8 117 aa13.73□□□□□ -0.21
UBE2D3-201ENST00000321805 MRPL52Q86TS9 123 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-201ENST00000321805 OR5A1Q8NGJ0 315 aa13.73□□□□□ -0.21
UBE2D3-201ENST00000321805 IGKV3OR2-268A0A0C4DH90 116 aa13.72□□□□□ -0.21
UBE2D3-201ENST00000321805 CHCHD10Q8WYQ3 142 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-201ENST00000321805 C7orf77A4D0Y5 90 aa13.71□□□□□ -0.21
UBE2D3-201ENST00000321805 VCYO14598 125 aa13.71□□□□□ -0.21
UBE2D3-201ENST00000321805 PPP1R2P9O14990 202 aa13.71□□□□□ -0.21
UBE2D3-201ENST00000321805 FAM104BQ5XKR9 115 aa13.71□□□□□ -0.21
UBE2D3-201ENST00000321805 SDIM1Q6ZPB5 146 aa13.71□□□□□ -0.21
UBE2D3-201ENST00000321805 LINC00862A6NCI5 91 aa13.7□□□□□ -0.22
UBE2D3-201ENST00000321805 SUMO2P61956 95 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms