RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 ENHOQ6UWT2 76 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 U3KQA8 63 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 A0A0J9YXY3 114 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 C20orf203Q8NBC4 194 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 IMUPQ9GZP8 106 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 C14orf177Q52M58 125 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 P0DMU3 169 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 FAM231AP0DMU4 169 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 FAM231CP0DMU5 169 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 H7C423 109 aa12.92□□□□□ -0.34
SMCHD1-201ENST00000320876 PLA2G2EQ9NZK7 142 aa12.91□□□□□ -0.34
SMCHD1-201ENST00000320876 A0A1B0GXF2 115 aa12.9□□□□□ -0.34
SMCHD1-201ENST00000320876 UFSP1Q6NVU6 142 aa12.9□□□□□ -0.34
SMCHD1-201ENST00000320876 KLK12Q9UKR0 248 aa12.9□□□□□ -0.34
SMCHD1-201ENST00000320876 PRAC2D3DTV9 90 aa12.89□□□□□ -0.35
SMCHD1-201ENST00000320876 LTBP2Q14767 1821 aa12.89□□□□□ -0.35
SMCHD1-201ENST00000320876 ZFHX2Q9C0A1 2572 aaPredicted RBP12.89□□□□□ -0.35
SMCHD1-201ENST00000320876 IGLV2-14P01704 120 aa12.88□□□□□ -0.35
SMCHD1-201ENST00000320876 ZFAND2AQ8N6M9 145 aa12.88□□□□□ -0.35
SMCHD1-201ENST00000320876 IGHV4-38-2P0DP08 117 aa12.88□□□□□ -0.35
SMCHD1-201ENST00000320876 CUL9Q8IWT3 2517 aa12.88□□□□□ -0.35
SMCHD1-201ENST00000320876 TMEM89A2RUT3 159 aa12.87□□□□□ -0.35
SMCHD1-201ENST00000320876 A6NED7 52 aa12.87□□□□□ -0.35
SMCHD1-201ENST00000320876 Q8N9W7 124 aa12.87□□□□□ -0.35
SMCHD1-201ENST00000320876 NEXN-AS1Q8NBZ9 246 aa12.87□□□□□ -0.35
SMCHD1-201ENST00000320876 BLCAPP62952 87 aa12.87□□□□□ -0.35
SMCHD1-201ENST00000320876 LYPD6Q86Y78 171 aa12.87□□□□□ -0.35
SMCHD1-201ENST00000320876 SERP2Q8N6R1 65 aa12.86□□□□□ -0.35
SMCHD1-201ENST00000320876 SPRY4Q9C004 299 aa12.86□□□□□ -0.35
SMCHD1-201ENST00000320876 MLST8Q9BVC4 326 aa12.86□□□□□ -0.35
SMCHD1-201ENST00000320876 SPRNQ5BIV9 151 aa12.86□□□□□ -0.35
SMCHD1-201ENST00000320876 ODF3Q96PU9 254 aa12.85□□□□□ -0.35
SMCHD1-201ENST00000320876 WFDC10BQ8IUB3 73 aa12.85□□□□□ -0.35
SMCHD1-201ENST00000320876 TRBV30A0A0K0K1B3 111 aa12.85□□□□□ -0.35
SMCHD1-201ENST00000320876 Q6ZSR3 168 aa12.85□□□□□ -0.35
SMCHD1-201ENST00000320876 DEFB135Q30KP9 77 aa12.84□□□□□ -0.35
SMCHD1-201ENST00000320876 TRIAP1O43715 76 aa12.84□□□□□ -0.35
SMCHD1-201ENST00000320876 PRO0255Q9UI72 69 aa12.84□□□□□ -0.35
SMCHD1-201ENST00000320876 A0A0J9YX75 114 aa12.83□□□□□ -0.35
SMCHD1-201ENST00000320876 ESM1Q9NQ30 184 aa12.83□□□□□ -0.36
SMCHD1-201ENST00000320876 FAM19A3Q7Z5A8 133 aa12.83□□□□□ -0.36
SMCHD1-201ENST00000320876 IBA57-AS1B1ANH7 110 aa12.82□□□□□ -0.36
SMCHD1-201ENST00000320876 KLK5Q9Y337 293 aaPredicted RBP12.82□□□□□ -0.36
SMCHD1-201ENST00000320876 TMEM223A0PJW6 202 aa12.82□□□□□ -0.36
SMCHD1-201ENST00000320876 LYRM9A8MSI8 78 aa12.82□□□□□ -0.36
SMCHD1-201ENST00000320876 ODF3L1Q8IXM7 274 aa12.82□□□□□ -0.36
SMCHD1-201ENST00000320876 LRRK2Q5S007 2527 aa12.81□□□□□ -0.36
SMCHD1-201ENST00000320876 REG3AQ06141 175 aa12.81□□□□□ -0.36
SMCHD1-201ENST00000320876 LINC00269Q8N2A0 174 aa12.81□□□□□ -0.36
SMCHD1-201ENST00000320876 DEFB113Q30KQ7 82 aa12.81□□□□□ -0.36
SMCHD1-201ENST00000320876 FRMD6-AS1P0C7T7 363 aa12.8□□□□□ -0.36
SMCHD1-201ENST00000320876 CEMP1Q6PRD7 247 aaPredicted RBP12.79□□□□□ -0.36
SMCHD1-201ENST00000320876 LINC00308Q8TCZ7 52 aa12.79□□□□□ -0.36
SMCHD1-201ENST00000320876 SIRPDQ9H106 197 aa12.79□□□□□ -0.36
SMCHD1-201ENST00000320876 HIVEP3Q5T1R4 2406 aa12.79□□□□□ -0.36
SMCHD1-201ENST00000320876 LINC00467Q9BRT7 94 aa12.79□□□□□ -0.36
SMCHD1-201ENST00000320876 IGHV4-61A0A0C4DH41 118 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 TIMM17BO60830 172 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 INSL3P51460 131 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 MRPS36P82909 103 aaKnown RBP12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 RNF138Q8WVD3 245 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 C20orf173Q96LM9 149 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 C11orf1Q9H5F2 150 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 E7EUB6 86 aa12.78□□□□□ -0.36
SMCHD1-201ENST00000320876 NOTCH2Q04721 2471 aa12.77□□□□□ -0.36
SMCHD1-201ENST00000320876 WT1P19544 449 aaPredicted RBP12.77□□□□□ -0.36
SMCHD1-201ENST00000320876 PLA2G2CQ5R387 149 aa12.77□□□□□ -0.37
SMCHD1-201ENST00000320876 CCKP06307 115 aa12.77□□□□□ -0.37
SMCHD1-201ENST00000320876 U3KQK5 164 aa12.77□□□□□ -0.37
SMCHD1-201ENST00000320876 IGHV4-30-2A0A087WSY4 118 aa12.76□□□□□ -0.37
SMCHD1-201ENST00000320876 LOXL1Q08397 574 aaPredicted RBP12.76□□□□□ -0.37
SMCHD1-201ENST00000320876 C1orf195Q5TG92 126 aa12.76□□□□□ -0.37
SMCHD1-201ENST00000320876 SNURFQ9Y675 71 aa12.76□□□□□ -0.37
SMCHD1-201ENST00000320876 SCXQ7RTU7 201 aa12.76□□□□□ -0.37
SMCHD1-201ENST00000320876 UNQ9165/PRO28630Q6UXU0 137 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 J3QKU1 62 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 COX7CP15954 63 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 GRNP28799 593 aaKnown RBP12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 HIGD2AQ9BW72 106 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 MAP6D1Q9H9H5 199 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 DEFB4AO15263 64 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 CHCHD10Q8WYQ3 142 aaPredicted RBP12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 WFDC11Q8NEX6 87 aa12.75□□□□□ -0.37
SMCHD1-201ENST00000320876 GDF5OSQ5U4N7 250 aa12.74□□□□□ -0.37
SMCHD1-201ENST00000320876 IGLV1-47P01700 117 aa12.74□□□□□ -0.37
SMCHD1-201ENST00000320876 TTC28Q96AY4 2481 aa12.74□□□□□ -0.37
SMCHD1-201ENST00000320876 RBX1P62877 108 aa12.74□□□□□ -0.37
SMCHD1-201ENST00000320876 MYCNOSP40205 109 aa12.73□□□□□ -0.37
SMCHD1-201ENST00000320876 LRRC75A-AS1Q8N1F1 130 aa12.73□□□□□ -0.37
SMCHD1-201ENST00000320876 IGKV1D-37A0A075B6S9 117 aa12.73□□□□□ -0.37
SMCHD1-201ENST00000320876 SLPIP03973 132 aa12.73□□□□□ -0.37
SMCHD1-201ENST00000320876 SMAD5-AS1Q9Y6J3 95 aa12.73□□□□□ -0.37
SMCHD1-201ENST00000320876 C3orf84H3BNL1 204 aa12.73□□□□□ -0.37
SMCHD1-201ENST00000320876 IGLV4-3A0A075B6K6 122 aa12.72□□□□□ -0.37
SMCHD1-201ENST00000320876 CDKN2A-AS1Q9UH64 79 aa12.72□□□□□ -0.37
SMCHD1-201ENST00000320876 IGKV2-24A0A0C4DH68 120 aa12.72□□□□□ -0.37
SMCHD1-201ENST00000320876 IGLV2-8P01709 118 aa12.72□□□□□ -0.37
SMCHD1-201ENST00000320876 P0C879 139 aa12.72□□□□□ -0.37
SMCHD1-201ENST00000320876 C1orf158Q8N1D5 194 aa12.72□□□□□ -0.37
SMCHD1-201ENST00000320876 ZNF80P51504 273 aaPredicted RBP12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms