RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 TRBV30A0A0K0K1B3 111 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 SPINK13Q1W4C9 94 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 NDUFA12Q9UI09 145 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 NDUFA4O00483 81 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 COX6CP09669 75 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 RPL13AP40429 203 aaKnown RBP7.14□□□□□ -1.27
PTPRA-202ENST00000318266 PROK1P58294 105 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 POM121L12Q8N7R1 296 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 A0A1W2PPR1 153 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 KNCNA6PVL3 124 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 KLLNB2CW77 178 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 ZNF625Q96I27 306 aaPredicted RBP7.14□□□□□ -1.27
PTPRA-202ENST00000318266 BPESC1Q9GZL8 116 aa7.14□□□□□ -1.27
PTPRA-202ENST00000318266 TRGV11A0A075B6L2 103 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 FAM223BA6NKX1 122 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 IGHV1-69P01742 117 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 PRM2P04554 102 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 FAM223AQ8IWN6 122 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 DUX5Q96PT3 197 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 LITAFQ99732 161 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 Q9UF83 564 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 PTPN13Q12923 2485 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 I3L3M4 83 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 MOB4Q9Y3A3 225 aa7.13□□□□□ -1.27
PTPRA-202ENST00000318266 IGHV3-16A0A0C4DH30 117 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 M0QXV9 152 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 NSUN5P1Q3KNT7 163 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 C11orf71Q6IPW1 123 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 FAM236AA0A1B0GUQ0 79 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 FAM236BA0A1B0GV22 79 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 BLCAPP62952 87 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 CFAP161Q6P656 301 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 FAM110AQ9BQ89 295 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 TENM4Q6N022 2769 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 TRBV6-5A0A0K0K1A5 114 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 Q6Q795 121 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 APRG1Q8IVJ8 170 aa7.12□□□□□ -1.27
PTPRA-202ENST00000318266 CSMD2Q7Z408 3487 aa7.11□□□□□ -1.27
PTPRA-202ENST00000318266 RHOHQ15669 191 aa7.11□□□□□ -1.27
PTPRA-202ENST00000318266 DAZ1Q9NQZ3 744 aaKnown RBP7.11□□□□□ -1.27
PTPRA-202ENST00000318266 TMEM95Q3KNT9 176 aa7.11□□□□□ -1.27
PTPRA-202ENST00000318266 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.1□□□□□ -1.27
PTPRA-202ENST00000318266 IGHV3-38A0A0C4DH36 116 aa7.1□□□□□ -1.27
PTPRA-202ENST00000318266 IGKV2-29A2NJV5 120 aaPredicted RBP7.1□□□□□ -1.27
PTPRA-202ENST00000318266 NAV2Q8IVL1 2488 aa7.1□□□□□ -1.27
PTPRA-202ENST00000318266 KLK9Q2XQG4 91 aa7.1□□□□□ -1.27
PTPRA-202ENST00000318266 ID1P41134 155 aa7.1□□□□□ -1.27
PTPRA-202ENST00000318266 MIAQ16674 131 aa7.1□□□□□ -1.27
PTPRA-202ENST00000318266 C9orf85Q96MD7 179 aa7.1□□□□□ -1.27
PTPRA-202ENST00000318266 IGHV1-58A0A0C4DH39 117 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 H3BT86 120 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 LST1O00453 97 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 GNLYP22749 145 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 TMEM61Q8N0U2 210 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 H3BUX3 64 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 BRI3O95415 125 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 DCANP1Q8TF63 244 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 PPDPFQ9H3Y8 114 aa7.09□□□□□ -1.27
PTPRA-202ENST00000318266 IGHV1OR15-1A0A075B7D0 117 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 A0A0J9YX75 114 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 ADORA2A-AS1P86434 159 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 FAM104AQ969W3 186 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 LMO4P61968 165 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 C19orf54Q5BKX5 351 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 VSIG2Q96IQ7 327 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 TMEM101Q96IK0 257 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 ABCA2Q9BZC7 2435 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 CFAP46Q8IYW2 2715 aa7.08□□□□□ -1.28
PTPRA-202ENST00000318266 RS1O15537 224 aa7.07□□□□□ -1.28
PTPRA-202ENST00000318266 MRPS36P82909 103 aaKnown RBP7.07□□□□□ -1.28
PTPRA-202ENST00000318266 C10orf99Q6UWK7 81 aa7.07□□□□□ -1.28
PTPRA-202ENST00000318266 TNFRSF18Q9Y5U5 241 aa7.07□□□□□ -1.28
PTPRA-202ENST00000318266 IGHV4-38-2P0DP08 117 aa7.07□□□□□ -1.28
PTPRA-202ENST00000318266 CDKN2A-AS1Q9UH64 79 aa7.07□□□□□ -1.28
PTPRA-202ENST00000318266 CELSR2Q9HCU4 2923 aa7.07□□□□□ -1.28
PTPRA-202ENST00000318266 SMCR5Q8TEV8 140 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 KLK5Q9Y337 293 aaPredicted RBP7.06□□□□□ -1.28
PTPRA-202ENST00000318266 CENPEQ02224 2701 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 USMG5Q96IX5 58 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 LINC01587Q99440 93 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 SPANXDQ9BXN6 97 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 SPANXCQ9NY87 97 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 IGHG2P01859 326 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 C9orf153Q5TBE3 101 aa7.06□□□□□ -1.28
PTPRA-202ENST00000318266 FBXL19-AS1Q494R0 122 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 Q6ZSN1 163 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 Q8N2B8 174 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 CITED2Q99967 270 aaPredicted RBP7.05□□□□□ -1.28
PTPRA-202ENST00000318266 FLNCQ14315 2725 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 SYNJ2BPP57105 145 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 SNRPD3P62318 126 aaKnown RBP7.05□□□□□ -1.28
PTPRA-202ENST00000318266 LINC00467Q9BRT7 94 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 LOC107984640A0A0U1RRK4 108 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 LINC00694P0DN24 101 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
PTPRA-202ENST00000318266 Q9H8V8 135 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 VPREB3Q9UKI3 123 aa7.05□□□□□ -1.28
PTPRA-202ENST00000318266 RBMY1A1P0DJD3 496 aaKnown RBP7.04□□□□□ -1.28
PTPRA-202ENST00000318266 RBMY1CP0DJD4 496 aa7.04□□□□□ -1.28
PTPRA-202ENST00000318266 RBMY1FQ15415 496 aaKnown RBP7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms