RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 TRAV21A0A0B4J279 112 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 KRTAP9-6A8MVA2 160 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 OR11H12B2RN74 326 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 IGLL5B9A064 214 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 NDUFA4O00483 81 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 MT3P25713 68 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 HLA-DMBP28068 263 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 FXYD2P54710 66 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 ATP5G2Q06055 141 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 ERCC8Q13216 396 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 FHL3Q13643 280 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 SPANXN1Q5VSR9 72 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 OR11H1Q8NG94 326 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 OR11H2Q8NH07 326 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 GLMPQ8WWB7 406 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 C18orf15Q96N68 181 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 DPH3P1Q9H4G8 78 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 MRPL35Q9NZE8 188 aaKnown RBP3.61□□□□□ -1.83
CKS1B-201ENST00000308987 S4R3C0 116 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 PKHD1P08F94 4074 aa3.61□□□□□ -1.83
CKS1B-201ENST00000308987 TRBV7-3A0A075B6L6 115 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 MYMXA0A1B0GTQ4 84 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 ATP6V0E1O15342 81 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 SAP30O75446 220 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 NXPH4O95158 308 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 IGHV3-23P01764 117 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 ASIPP42127 132 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 FXYD7P58549 80 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 SUMO2P61956 95 aaKnown RBP3.6□□□□□ -1.83
CKS1B-201ENST00000308987 RRN3P1Q2M238 152 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 C12orf74Q32Q52 190 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 CASC10Q5T4H9 136 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 LYRM7Q5U5X0 104 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 CLEC19AQ6UXS0 136 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 GTSCR1Q86UQ5 136 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 RNF182Q8N6D2 247 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 C5orf56Q8N8D9 126 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 NEXN-AS1Q8NBZ9 246 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 OR10J6PQ8NGY7 276 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 ATP6V0E2Q8NHE4 81 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 RAB37Q96AX2 223 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 USMG5Q96IX5 58 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 ZNF479Q96JC4 524 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 FAM19A4Q96LR4 140 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 SCGB3A1Q96QR1 104 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 NHP2Q9NX24 153 aaKnown RBP3.6□□□□□ -1.83
CKS1B-201ENST00000308987 MOB4Q9Y3A3 225 aa3.6□□□□□ -1.83
CKS1B-201ENST00000308987 CHTOPQ9Y3Y2 248 aaKnown RBP3.6□□□□□ -1.83
CKS1B-201ENST00000308987 TSSC4Q9Y5U2 329 aaPredicted RBP3.6□□□□□ -1.83
CKS1B-201ENST00000308987 TRAV41A0A0B4J266 112 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 TMEM238C9JI98 176 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 SOCS3O14543 225 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 GAS8-AS1O95177 125 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 TRGV3P03979 118 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 IGF1P05019 195 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 GATA1P15976 413 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-201ENST00000308987 ECSCRQ19T08 205 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 KHDC1LQ5JSQ8 128 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 ZFAND2AQ8N6M9 145 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 RASL10AQ92737 203 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 TMEM141Q96I45 108 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 DUX3Q96PT4 197 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 HIST1H4GQ99525 98 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 SIGMAR1Q99720 223 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 VCX2Q9H322 139 aa3.59□□□□□ -1.83
CKS1B-201ENST00000308987 SPANXB1Q9NS25 103 aaPredicted RBP3.59□□□□□ -1.83
CKS1B-201ENST00000308987 KIAA1109Q2LD37 5005 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 TRBV6-5A0A0K0K1A5 114 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 TEX48A0A1B0GUV7 120 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 C3orf84H3BNL1 204 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 H3BVH4 76 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 K7EMT4 169 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 M0QXV9 152 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 CIDEAO60543 219 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 S100A4P26447 101 aaKnown RBP3.58□□□□□ -1.84
CKS1B-201ENST00000308987 ARL3P36405 182 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 HERVK_113P61574 105 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 RPL24P83731 157 aaKnown RBP3.58□□□□□ -1.84
CKS1B-201ENST00000308987 C2orf66Q6UXQ4 117 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 MAPKAPK5-AS1Q8N8E1 139 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 ODF3Q96PU9 254 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 TIMM17AQ99595 171 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 LINC00527Q9UJ94 153 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 CYSLTR1Q9Y271 337 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 UFC1Q9Y3C8 167 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 PHLDA3Q9Y5J5 127 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 DNAH11Q96DT5 4516 aa3.58□□□□□ -1.84
CKS1B-201ENST00000308987 TRBV20-1A0A075B6N2 111 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 LCE6AA0A183 80 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 KLLNB2CW77 178 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 G3V318 75 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 H3BMG7 143 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 VCYO14598 125 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 IGHG2P01859 326 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
CKS1B-201ENST00000308987 ID1P41134 155 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 UBE2D1P51668 147 aa3.57□□□□□ -1.84
CKS1B-201ENST00000308987 POLR2KP53803 58 aaKnown RBP3.57□□□□□ -1.84
CKS1B-201ENST00000308987 PKD1P98161 4303 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms