RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 DEFB113Q30KQ7 82 aa9.97□□□□□ -0.81
DDX54-201ENST00000306014 IGHV1-58A0A0C4DH39 117 aa9.97□□□□□ -0.81
DDX54-201ENST00000306014 SS18Q15532 418 aa9.97□□□□□ -0.81
DDX54-201ENST00000306014 BAALC-AS2P0C853 105 aa9.96□□□□□ -0.81
DDX54-201ENST00000306014 A0A0J9YXY3 114 aa9.96□□□□□ -0.81
DDX54-201ENST00000306014 IGHG4P01861 327 aa9.96□□□□□ -0.81
DDX54-201ENST00000306014 TRBV7-3A0A075B6L6 115 aa9.96□□□□□ -0.82
DDX54-201ENST00000306014 TRBV10-2A0A0K0K1G8 114 aa9.96□□□□□ -0.82
DDX54-201ENST00000306014 LAMTOR3Q9UHA4 124 aa9.96□□□□□ -0.82
DDX54-201ENST00000306014 TMEM61Q8N0U2 210 aa9.95□□□□□ -0.82
DDX54-201ENST00000306014 IGHV4-4A0A075B6R2 117 aa9.95□□□□□ -0.82
DDX54-201ENST00000306014 TRAV13-2A0A0B4J235 113 aa9.95□□□□□ -0.82
DDX54-201ENST00000306014 ZNF22P17026 224 aaPredicted RBP9.95□□□□□ -0.82
DDX54-201ENST00000306014 M0QY20 66 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 EYSQ5T1H1 3165 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 CLPSL2Q6UWE3 100 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 C10orf99Q6UWK7 81 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 Q6ZS46 218 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 VSIG2Q96IQ7 327 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 DNAJC30Q96LL9 226 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 PCSK5Q92824 1860 aa9.94□□□□□ -0.82
DDX54-201ENST00000306014 A0A096LPF7 62 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 SOCS3O14543 225 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 C5orf38Q86SI9 138 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 LGALS9O00182 355 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 ZMAT4Q9H898 229 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 TEX49A0A1B0GTD5 131 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 K7EQG2 157 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 COX8CQ7Z4L0 72 aa9.93□□□□□ -0.82
DDX54-201ENST00000306014 TRBV27A0A0K0K1C4 114 aa9.92□□□□□ -0.82
DDX54-201ENST00000306014 TINCRA0A1B0GVN0 87 aa9.92□□□□□ -0.82
DDX54-201ENST00000306014 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
DDX54-201ENST00000306014 CFAP126Q5VTH2 177 aa9.92□□□□□ -0.82
DDX54-201ENST00000306014 A0A0B4J2C4 111 aa9.92□□□□□ -0.82
DDX54-201ENST00000306014 POLR2KP53803 58 aaKnown RBP9.91□□□□□ -0.82
DDX54-201ENST00000306014 RNF183Q96D59 192 aa9.91□□□□□ -0.82
DDX54-201ENST00000306014 IGHV3-30P01768 117 aa9.91□□□□□ -0.82
DDX54-201ENST00000306014 IGHV3-30-5P0DP03 117 aa9.91□□□□□ -0.82
DDX54-201ENST00000306014 PROK1P58294 105 aa9.91□□□□□ -0.82
DDX54-201ENST00000306014 IGHV3-33P01772 117 aa9.91□□□□□ -0.82
DDX54-201ENST00000306014 XCL1P47992 114 aa9.91□□□□□ -0.82
DDX54-201ENST00000306014 H3BT86 120 aa9.9□□□□□ -0.82
DDX54-201ENST00000306014 MIAQ16674 131 aa9.9□□□□□ -0.82
DDX54-201ENST00000306014 SND1-IT1Q9HBX3 110 aa9.9□□□□□ -0.82
DDX54-201ENST00000306014 CDKN2A-AS1Q9UH64 79 aa9.9□□□□□ -0.82
DDX54-201ENST00000306014 CCL24O00175 119 aa9.9□□□□□ -0.83
DDX54-201ENST00000306014 HERV-K104P63124 156 aa9.9□□□□□ -0.83
DDX54-201ENST00000306014 K7EQD1 137 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 RNF152Q8N8N0 203 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 IGLV2-18A0A075B6J9 118 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 A8MZ25 164 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 KLLNB2CW77 178 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 PSMG3-AS1Q96PY0 264 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 C3orf56Q8N813 242 aa9.89□□□□□ -0.83
DDX54-201ENST00000306014 TRIAP1O43715 76 aa9.88□□□□□ -0.83
DDX54-201ENST00000306014 ODF3Q96PU9 254 aa9.88□□□□□ -0.83
DDX54-201ENST00000306014 LINC00467Q9BRT7 94 aa9.88□□□□□ -0.83
DDX54-201ENST00000306014 JMJD1CQ15652 2540 aa9.88□□□□□ -0.83
DDX54-201ENST00000306014 ABCA12Q86UK0 2595 aa9.88□□□□□ -0.83
DDX54-201ENST00000306014 DAZ2Q13117 558 aaKnown RBP9.88□□□□□ -0.83
DDX54-201ENST00000306014 DAZ4Q86SG3 579 aaKnown RBP9.88□□□□□ -0.83
DDX54-201ENST00000306014 SPATA25Q9BR10 227 aa9.88□□□□□ -0.83
DDX54-201ENST00000306014 DAZ3Q9NR90 486 aaKnown RBP9.88□□□□□ -0.83
DDX54-201ENST00000306014 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 FAM236AA0A1B0GUQ0 79 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 FAM236BA0A1B0GV22 79 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 SPTBN5Q9NRC6 3674 aaKnown RBP9.87□□□□□ -0.83
DDX54-201ENST00000306014 SPEGQ15772 3267 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 TMEM89A2RUT3 159 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 IGIPA6NJ69 53 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 EDN2P20800 178 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 SMIM20Q8N5G0 67 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 PRRC2AP48634 2157 aaKnown RBP9.87□□□□□ -0.83
DDX54-201ENST00000306014 PRM2P04554 102 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 ACYP1P07311 99 aa9.87□□□□□ -0.83
DDX54-201ENST00000306014 TSHBP01222 138 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 GHRHP01286 108 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 CRYGDP07320 174 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 VCANP13611 3396 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 XGP55808 180 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 A0A1W2PPR1 153 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 MAP6D1Q9H9H5 199 aa9.86□□□□□ -0.83
DDX54-201ENST00000306014 RPL32P62910 135 aaKnown RBP9.85□□□□□ -0.83
DDX54-201ENST00000306014 ZNF292O60281 2723 aa9.85□□□□□ -0.83
DDX54-201ENST00000306014 FN1P02751 2386 aaKnown RBP9.85□□□□□ -0.83
DDX54-201ENST00000306014 ANGP03950 147 aaKnown RBP9.85□□□□□ -0.83
DDX54-201ENST00000306014 MIR7-3HGQ8N6C7 128 aa9.85□□□□□ -0.83
DDX54-201ENST00000306014 COX7B2Q8TF08 81 aa9.85□□□□□ -0.83
DDX54-201ENST00000306014 DCANP1Q8TF63 244 aa9.85□□□□□ -0.83
DDX54-201ENST00000306014 F5H768 121 aa9.84□□□□□ -0.83
DDX54-201ENST00000306014 LAMA1P25391 3075 aa9.84□□□□□ -0.83
DDX54-201ENST00000306014 Q9HAA7 133 aa9.84□□□□□ -0.83
DDX54-201ENST00000306014 VPS13AQ96RL7 3174 aa9.84□□□□□ -0.83
DDX54-201ENST00000306014 TRAV4A0A0B4J268 109 aa9.84□□□□□ -0.83
DDX54-201ENST00000306014 UBE2D1P51668 147 aa9.84□□□□□ -0.83
DDX54-201ENST00000306014 CRLF1O75462 422 aa9.83□□□□□ -0.84
DDX54-201ENST00000306014 NDUFV3P56181 108 aaKnown RBP9.83□□□□□ -0.84
DDX54-201ENST00000306014 Q6ZTI0 123 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms