RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 PEMTQ9UBM1 199 aa16.12■□□□□ 0.17
TPM4-201ENST00000300933 OTOGQ6ZRI0 2925 aa16.11■□□□□ 0.17
TPM4-201ENST00000300933 IGHV3-73A0A0B4J1V6 119 aa16.11■□□□□ 0.17
TPM4-201ENST00000300933 CITED2Q99967 270 aaPredicted RBP16.11■□□□□ 0.17
TPM4-201ENST00000300933 DUSP14O95147 198 aaKnown RBP16.11■□□□□ 0.17
TPM4-201ENST00000300933 NXPH4O95158 308 aa16.11■□□□□ 0.17
TPM4-201ENST00000300933 NACAE9PAV3 2078 aa16.11■□□□□ 0.17
TPM4-201ENST00000300933 H3BMM0 161 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 DEFB114Q30KQ6 69 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 ZNF876PQ49A33 203 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 UBE2D3P61077 147 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 UBE2D2P62837 147 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 NDUFA11Q86Y39 141 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 RNF183Q96D59 192 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 C9orf85Q96MD7 179 aa16.1■□□□□ 0.17
TPM4-201ENST00000300933 ZNF56Q15929 161 aa16.09■□□□□ 0.17
TPM4-201ENST00000300933 PPDPFLQ8WWR9 84 aa16.09■□□□□ 0.17
TPM4-201ENST00000300933 ODF3Q96PU9 254 aa16.09■□□□□ 0.17
TPM4-201ENST00000300933 C11orf86A6NJI1 115 aa16.09■□□□□ 0.17
TPM4-201ENST00000300933 TEN1Q86WV5 123 aa16.09■□□□□ 0.17
TPM4-201ENST00000300933 SCGB1C2P0DMR2 95 aa16.08■□□□□ 0.16
TPM4-201ENST00000300933 MAP6D1Q9H9H5 199 aa16.08■□□□□ 0.16
TPM4-201ENST00000300933 TMEM86BQ8N661 226 aa16.08■□□□□ 0.16
TPM4-201ENST00000300933 ZNF256Q9Y2P7 627 aaPredicted RBP16.08■□□□□ 0.16
TPM4-201ENST00000300933 CRYGDP07320 174 aa16.07■□□□□ 0.16
TPM4-201ENST00000300933 LINC01006Q8NI28 216 aa16.06■□□□□ 0.16
TPM4-201ENST00000300933 A0A0J9YY99 117 aa16.06■□□□□ 0.16
TPM4-201ENST00000300933 CCL24O00175 119 aa16.06■□□□□ 0.16
TPM4-201ENST00000300933 C2CD3Q4AC94 2353 aa16.05■□□□□ 0.16
TPM4-201ENST00000300933 CFC1BP0CG36 223 aa16.05■□□□□ 0.16
TPM4-201ENST00000300933 CFC1P0CG37 223 aa16.05■□□□□ 0.16
TPM4-201ENST00000300933 PROK1P58294 105 aa16.05■□□□□ 0.16
TPM4-201ENST00000300933 RPL39P62891 51 aaKnown RBP16.05■□□□□ 0.16
TPM4-201ENST00000300933 ANKRD29Q8N6D5 301 aa16.05■□□□□ 0.16
TPM4-201ENST00000300933 A8MWV9 139 aa16.05■□□□□ 0.16
TPM4-201ENST00000300933 SDHAF1A6NFY7 115 aa16.04■□□□□ 0.16
TPM4-201ENST00000300933 TSPEAR-AS2P59090 65 aa16.04■□□□□ 0.16
TPM4-201ENST00000300933 TP53TG1Q9Y2A0 90 aa16.04■□□□□ 0.16
TPM4-201ENST00000300933 IGLV4-69A0A075B6H9 119 aa16.03■□□□□ 0.16
TPM4-201ENST00000300933 TSHBP01222 138 aa16.03■□□□□ 0.16
TPM4-201ENST00000300933 TMEM170BQ5T4T1 132 aa16.03■□□□□ 0.16
TPM4-201ENST00000300933 P0DMU3 169 aa16.03■□□□□ 0.16
TPM4-201ENST00000300933 FAM231AP0DMU4 169 aa16.03■□□□□ 0.16
TPM4-201ENST00000300933 FAM231CP0DMU5 169 aa16.03■□□□□ 0.16
TPM4-201ENST00000300933 LYRM7Q5U5X0 104 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 POM121L12Q8N7R1 296 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 IGHV3OR16-12A0A075B7B8 117 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 H7C2G1 150 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 ANAPC13Q9BS18 74 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 XCL2Q9UBD3 114 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 Q9UF83 564 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 ERG28Q9UKR5 140 aa16.02■□□□□ 0.16
TPM4-201ENST00000300933 POLR2KP53803 58 aaKnown RBP16.01■□□□□ 0.15
TPM4-201ENST00000300933 M0QY20 66 aa16.01■□□□□ 0.15
TPM4-201ENST00000300933 IGHV3-30P01768 117 aa16.01■□□□□ 0.15
TPM4-201ENST00000300933 IGHV3-30-5P0DP03 117 aa16.01■□□□□ 0.15
TPM4-201ENST00000300933 HERVK_113P61574 105 aa16.01■□□□□ 0.15
TPM4-201ENST00000300933 ODF3L2Q3SX64 289 aa16.01■□□□□ 0.15
TPM4-201ENST00000300933 C10orf126Q8N4M7 172 aa16■□□□□ 0.15
TPM4-201ENST00000300933 LINC01587Q99440 93 aa16■□□□□ 0.15
TPM4-201ENST00000300933 VWFP04275 2813 aa16■□□□□ 0.15
TPM4-201ENST00000300933 SS18L2Q9UHA2 77 aa16■□□□□ 0.15
TPM4-201ENST00000300933 TRPT1Q86TN4 253 aaKnown RBP15.99■□□□□ 0.15
TPM4-201ENST00000300933 TRBV20-1A0A075B6N2 111 aa15.99■□□□□ 0.15
TPM4-201ENST00000300933 TEX29Q8N6K0 151 aa15.99■□□□□ 0.15
TPM4-201ENST00000300933 NSUN5P1Q3KNT7 163 aa15.98■□□□□ 0.15
TPM4-201ENST00000300933 PRO1854Q9UHT4 67 aa15.98■□□□□ 0.15
TPM4-201ENST00000300933 TRGV11A0A075B6L2 103 aa15.98■□□□□ 0.15
TPM4-201ENST00000300933 C9JAW5 83 aa15.98■□□□□ 0.15
TPM4-201ENST00000300933 OPRPNQ99935 248 aaPredicted RBP15.98■□□□□ 0.15
TPM4-201ENST00000300933 PPP1R17O96001 155 aa15.97■□□□□ 0.15
TPM4-201ENST00000300933 VCYO14598 125 aa15.97■□□□□ 0.15
TPM4-201ENST00000300933 PMVKQ15126 192 aa15.97■□□□□ 0.15
TPM4-201ENST00000300933 ZFAND6Q6FIF0 208 aa15.97■□□□□ 0.15
TPM4-201ENST00000300933 ZNRF2Q8NHG8 242 aa15.97■□□□□ 0.15
TPM4-201ENST00000300933 WFDC10AQ9H1F0 79 aa15.97■□□□□ 0.15
TPM4-201ENST00000300933 SLC25A29Q8N8R3 303 aa15.96■□□□□ 0.15
TPM4-201ENST00000300933 IGIPA6NJ69 53 aa15.96■□□□□ 0.15
TPM4-201ENST00000300933 SLC25A20O43772 301 aa15.96■□□□□ 0.15
TPM4-201ENST00000300933 IGHV3-64A0A075B6Q5 118 aa15.95■□□□□ 0.14
TPM4-201ENST00000300933 RNASE1P07998 156 aaKnown RBP15.95■□□□□ 0.14
TPM4-201ENST00000300933 SBSPONQ8IVN8 264 aa15.95■□□□□ 0.14
TPM4-201ENST00000300933 Q6ZSN1 163 aa15.94■□□□□ 0.14
TPM4-201ENST00000300933 A4D1N5 150 aa15.94■□□□□ 0.14
TPM4-201ENST00000300933 J3QQQ9 107 aa15.93■□□□□ 0.14
TPM4-201ENST00000300933 VCX2Q9H322 139 aa15.93■□□□□ 0.14
TPM4-201ENST00000300933 LGALS3P17931 250 aaKnown RBP15.92■□□□□ 0.14
TPM4-201ENST00000300933 PAPPA-AS1Q5QFB9 102 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 STHQ8IWL8 128 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 TRAV2A0A0B4J234 112 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 TRBV27A0A0K0K1C4 114 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 A8MTW9 85 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 B5MCH6 92 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 TENM1Q9UKZ4 2725 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 NBEAL2Q6ZNJ1 2754 aa15.92■□□□□ 0.14
TPM4-201ENST00000300933 EIF4EBP3O60516 100 aaPredicted RBP15.91■□□□□ 0.14
TPM4-201ENST00000300933 AMELXQ99217 191 aa15.91■□□□□ 0.14
TPM4-201ENST00000300933 HIVEP1P15822 2718 aa15.9■□□□□ 0.14
TPM4-201ENST00000300933 TMEM262E9PQX1 116 aa15.9■□□□□ 0.14
TPM4-201ENST00000300933 Q1RN00 199 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms