RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 BEAN1Q3B7T3 259 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 Q6ZSN1 163 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 Q9UF83 564 aa14.37□□□□□ -0.11
NFIL3-201ENST00000297689 F8W1H4 67 aa14.36□□□□□ -0.11
NFIL3-201ENST00000297689 CFAP126Q5VTH2 177 aa14.36□□□□□ -0.11
NFIL3-201ENST00000297689 CUBNO60494 3623 aa14.36□□□□□ -0.11
NFIL3-201ENST00000297689 IGHV3-73A0A0B4J1V6 119 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 IGHV3-30P01768 117 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 IGHV3-30-5P0DP03 117 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 CRYBA4P53673 196 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 KHDC1LQ5JSQ8 128 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 RHODO00212 210 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 LEPROTO15243 131 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 DYNLRB2Q8TF09 96 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 PRO0461Q9UI25 63 aa14.35□□□□□ -0.11
NFIL3-201ENST00000297689 FHL3Q13643 280 aa14.34□□□□□ -0.11
NFIL3-201ENST00000297689 A0A0J9YXV3 536 aa14.34□□□□□ -0.11
NFIL3-201ENST00000297689 H3BMG7 143 aa14.34□□□□□ -0.11
NFIL3-201ENST00000297689 VCX2Q9H322 139 aa14.34□□□□□ -0.11
NFIL3-201ENST00000297689 PGPEP1Q9NXJ5 209 aa14.34□□□□□ -0.11
NFIL3-201ENST00000297689 RAX2Q96IS3 184 aa14.33□□□□□ -0.12
NFIL3-201ENST00000297689 SPXQ9BT56 116 aa14.33□□□□□ -0.12
NFIL3-201ENST00000297689 CD28P10747 220 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 WFDC2Q14508 124 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 ODF3L2Q3SX64 289 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 TRAV25A0A0B4J276 109 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 IGHV3-53P01767 116 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 MRPS36P82909 103 aaKnown RBP14.32□□□□□ -0.12
NFIL3-201ENST00000297689 LINC01587Q99440 93 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 CHCHD7Q9BUK0 85 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 MTORP42345 2549 aa14.32□□□□□ -0.12
NFIL3-201ENST00000297689 TEX48A0A1B0GUV7 120 aa14.31□□□□□ -0.12
NFIL3-201ENST00000297689 NDUFA11Q86Y39 141 aa14.31□□□□□ -0.12
NFIL3-201ENST00000297689 RS1O15537 224 aa14.3□□□□□ -0.12
NFIL3-201ENST00000297689 INSP01308 110 aa14.3□□□□□ -0.12
NFIL3-201ENST00000297689 LGALS3P17931 250 aaKnown RBP14.3□□□□□ -0.12
NFIL3-201ENST00000297689 TSPAN13O95857 204 aa14.3□□□□□ -0.12
NFIL3-201ENST00000297689 C11orf44Q8N8P7 122 aa14.3□□□□□ -0.12
NFIL3-201ENST00000297689 CFC1BP0CG36 223 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 CFC1P0CG37 223 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 UBE2D3P61077 147 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 UBE2D2P62837 147 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 C21orf62-AS1Q17RA5 79 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 MRPL16Q9NX20 251 aaKnown RBP14.29□□□□□ -0.12
NFIL3-201ENST00000297689 NF1P21359 2839 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 IL17DQ8TAD2 202 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 DNAJC30Q96LL9 226 aa14.29□□□□□ -0.12
NFIL3-201ENST00000297689 RNASE1P07998 156 aaKnown RBP14.27□□□□□ -0.12
NFIL3-201ENST00000297689 CEMP1Q6PRD7 247 aaPredicted RBP14.27□□□□□ -0.12
NFIL3-201ENST00000297689 UBE2D4Q9Y2X8 147 aa14.27□□□□□ -0.12
NFIL3-201ENST00000297689 AZU1P20160 251 aa14.27□□□□□ -0.13
NFIL3-201ENST00000297689 RPL24P83731 157 aaKnown RBP14.27□□□□□ -0.13
NFIL3-201ENST00000297689 GAGE13Q4V321 117 aa14.27□□□□□ -0.13
NFIL3-201ENST00000297689 C1orf158Q8N1D5 194 aa14.27□□□□□ -0.13
NFIL3-201ENST00000297689 SPANXA1Q9NS26 97 aa14.27□□□□□ -0.13
NFIL3-201ENST00000297689 A0A1W2PRX2 142 aa14.26□□□□□ -0.13
NFIL3-201ENST00000297689 C10orf126Q8N4M7 172 aa14.26□□□□□ -0.13
NFIL3-201ENST00000297689 SMR3AQ99954 134 aa14.26□□□□□ -0.13
NFIL3-201ENST00000297689 APOMO95445 188 aa14.26□□□□□ -0.13
NFIL3-201ENST00000297689 LINC01006Q8NI28 216 aa14.26□□□□□ -0.13
NFIL3-201ENST00000297689 C16orf95Q9H693 158 aa14.26□□□□□ -0.13
NFIL3-201ENST00000297689 HIVEP1P15822 2718 aa14.25□□□□□ -0.13
NFIL3-201ENST00000297689 CCL24O00175 119 aa14.25□□□□□ -0.13
NFIL3-201ENST00000297689 IGHV3-30-3P0DP02 117 aa14.24□□□□□ -0.13
NFIL3-201ENST00000297689 XCL2Q9UBD3 114 aa14.24□□□□□ -0.13
NFIL3-201ENST00000297689 EIF4EBP3O60516 100 aaPredicted RBP14.24□□□□□ -0.13
NFIL3-201ENST00000297689 CITED2Q99967 270 aaPredicted RBP14.24□□□□□ -0.13
NFIL3-201ENST00000297689 HIVEP2P31629 2446 aa14.23□□□□□ -0.13
NFIL3-201ENST00000297689 TINCRA0A1B0GVN0 87 aa14.23□□□□□ -0.13
NFIL3-201ENST00000297689 IGHV3-64A0A075B6Q5 118 aa14.22□□□□□ -0.13
NFIL3-201ENST00000297689 A0A0J9YXY3 114 aa14.22□□□□□ -0.13
NFIL3-201ENST00000297689 ETDBQ3ZM63 59 aa14.22□□□□□ -0.13
NFIL3-201ENST00000297689 SH2D6Q7Z4S9 175 aa14.22□□□□□ -0.13
NFIL3-201ENST00000297689 STHQ8IWL8 128 aa14.22□□□□□ -0.13
NFIL3-201ENST00000297689 LITAFQ99732 161 aa14.22□□□□□ -0.13
NFIL3-201ENST00000297689 SMCPP49901 116 aaPredicted RBP14.21□□□□□ -0.13
NFIL3-201ENST00000297689 PRO1854Q9UHT4 67 aa14.21□□□□□ -0.13
NFIL3-201ENST00000297689 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.21□□□□□ -0.14
NFIL3-201ENST00000297689 IGHV1-58A0A0C4DH39 117 aa14.21□□□□□ -0.14
NFIL3-201ENST00000297689 IGKV2-29A2NJV5 120 aaPredicted RBP14.21□□□□□ -0.14
NFIL3-201ENST00000297689 A4D1N5 150 aa14.21□□□□□ -0.14
NFIL3-201ENST00000297689 TIMM21Q9BVV7 248 aa14.21□□□□□ -0.14
NFIL3-201ENST00000297689 LY6G6DO95868 133 aa14.2□□□□□ -0.14
NFIL3-201ENST00000297689 HILS1P60008 231 aa14.2□□□□□ -0.14
NFIL3-201ENST00000297689 RNASE13Q5GAN3 156 aaKnown RBP14.2□□□□□ -0.14
NFIL3-201ENST00000297689 MTURNQ8N3F0 131 aa14.2□□□□□ -0.14
NFIL3-201ENST00000297689 COTL1Q14019 142 aa14.19□□□□□ -0.14
NFIL3-201ENST00000297689 Q6ZUT4 128 aa14.19□□□□□ -0.14
NFIL3-201ENST00000297689 SETXQ7Z333 2677 aaKnown RBP14.19□□□□□ -0.14
NFIL3-201ENST00000297689 TRAV8-3A0A0A6YYJ7 113 aa14.19□□□□□ -0.14
NFIL3-201ENST00000297689 IGHV3-38A0A0C4DH36 116 aa14.19□□□□□ -0.14
NFIL3-201ENST00000297689 MUSTN1Q8IVN3 82 aa14.19□□□□□ -0.14
NFIL3-201ENST00000297689 TMEM263Q8WUH6 116 aaKnown RBP14.19□□□□□ -0.14
NFIL3-201ENST00000297689 TMEM238C9JI98 176 aa14.18□□□□□ -0.14
NFIL3-201ENST00000297689 VSIG2Q96IQ7 327 aa14.18□□□□□ -0.14
NFIL3-201ENST00000297689 TSSC4Q9Y5U2 329 aaPredicted RBP14.18□□□□□ -0.14
NFIL3-201ENST00000297689 WNK1Q9H4A3 2382 aa14.18□□□□□ -0.14
NFIL3-201ENST00000297689 A0A0B4J2C4 111 aa14.18□□□□□ -0.14
NFIL3-201ENST00000297689 LOC107984156A0A0G2JMH3 177 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms