RNA–Protein interactions for RNA: ENST00000293861.7

SNRNP25-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 25, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNRNP25, Length 1,905 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP25-201ENST00000293861 ZNF479Q96JC4 524 aa15.41■□□□□ 0.06
SNRNP25-201ENST00000293861 CIDEAO60543 219 aa15.4■□□□□ 0.06
SNRNP25-201ENST00000293861 HIGD1BQ9P298 99 aa15.4■□□□□ 0.06
SNRNP25-201ENST00000293861 ATRQ13535 2644 aa15.4■□□□□ 0.06
SNRNP25-201ENST00000293861 TRBV10-1A0A0K0K1A3 114 aa15.39■□□□□ 0.05
SNRNP25-201ENST00000293861 NPSP0C0P6 89 aa15.39■□□□□ 0.05
SNRNP25-201ENST00000293861 TMEM97Q5BJF2 176 aa15.39■□□□□ 0.05
SNRNP25-201ENST00000293861 KRTAP24-1Q3LI83 254 aa15.39■□□□□ 0.05
SNRNP25-201ENST00000293861 CRYBA4P53673 196 aa15.37■□□□□ 0.05
SNRNP25-201ENST00000293861 CHCHD7Q9BUK0 85 aa15.37■□□□□ 0.05
SNRNP25-201ENST00000293861 IGLV4-3A0A075B6K6 122 aa15.37■□□□□ 0.05
SNRNP25-201ENST00000293861 E9PLD3 99 aa15.37■□□□□ 0.05
SNRNP25-201ENST00000293861 K7EQD1 137 aa15.37■□□□□ 0.05
SNRNP25-201ENST00000293861 HSD52Q0P140 79 aa15.37■□□□□ 0.05
SNRNP25-201ENST00000293861 TRBV7-3A0A075B6L6 115 aa15.36■□□□□ 0.05
SNRNP25-201ENST00000293861 C11orf86A6NJI1 115 aa15.36■□□□□ 0.05
SNRNP25-201ENST00000293861 TTTY13Q9BZ97 58 aa15.36■□□□□ 0.05
SNRNP25-201ENST00000293861 VWFP04275 2813 aa15.35■□□□□ 0.05
SNRNP25-201ENST00000293861 COTL1Q14019 142 aa15.35■□□□□ 0.05
SNRNP25-201ENST00000293861 NFE4Q86UQ8 179 aa15.35■□□□□ 0.05
SNRNP25-201ENST00000293861 OPRPNQ99935 248 aaPredicted RBP15.35■□□□□ 0.05
SNRNP25-201ENST00000293861 OR11H2Q8NH07 326 aa15.34■□□□□ 0.05
SNRNP25-201ENST00000293861 KIR2DL5BQ8NHK3 375 aa15.34■□□□□ 0.05
SNRNP25-201ENST00000293861 TRBV25-1A0A075B6N4 114 aa15.33■□□□□ 0.05
SNRNP25-201ENST00000293861 RPL36AP83881 106 aaKnown RBP15.33■□□□□ 0.05
SNRNP25-201ENST00000293861 MAPKAPK5-AS1Q8N8E1 139 aa15.33■□□□□ 0.05
SNRNP25-201ENST00000293861 ZNRF2Q8NHG8 242 aa15.33■□□□□ 0.05
SNRNP25-201ENST00000293861 RPL36ALQ969Q0 106 aaKnown RBP15.33■□□□□ 0.05
SNRNP25-201ENST00000293861 SPANXA1Q9NS26 97 aa15.33■□□□□ 0.05
SNRNP25-201ENST00000293861 TRAV8-6A0A0B4J262 113 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 GAGE12BA1L429 117 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 GAGE7O76087 117 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 GAGE12FP0CL80 117 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 GAGE12GP0CL81 117 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 GAGE12IP0CL82 117 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 SEC11AP67812 179 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 SLC25A29Q8N8R3 303 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 FAM104AQ969W3 186 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 AMELXQ99217 191 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 VCX2Q9H322 139 aa15.33■□□□□ 0.04
SNRNP25-201ENST00000293861 NOTCH3Q9UM47 2321 aa15.32■□□□□ 0.04
SNRNP25-201ENST00000293861 SMIM9A6NGZ8 99 aa15.32■□□□□ 0.04
SNRNP25-201ENST00000293861 PHLDA1Q8WV24 401 aaPredicted RBP15.32■□□□□ 0.04
SNRNP25-201ENST00000293861 TRGV2A0A075B6R0 118 aa15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 UBE2D4Q9Y2X8 147 aa15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 IGHV3-38A0A0C4DH36 116 aa15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 APOC4P55056 127 aa15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 HERVK_113P61574 105 aa15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 DAZ4Q86SG3 579 aaKnown RBP15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 PRADC1Q9BSG0 188 aa15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 DAZ3Q9NR90 486 aaKnown RBP15.31■□□□□ 0.04
SNRNP25-201ENST00000293861 TRBV6-4A0A1B0GX49 114 aa15.3■□□□□ 0.04
SNRNP25-201ENST00000293861 EMP1P54849 157 aa15.3■□□□□ 0.04
SNRNP25-201ENST00000293861 ORAOV1Q8WV07 137 aa15.3■□□□□ 0.04
SNRNP25-201ENST00000293861 CHAC1Q9BUX1 264 aa15.3■□□□□ 0.04
SNRNP25-201ENST00000293861 UBE2D3P61077 147 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 UBE2D2P62837 147 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 LINC00612Q8N6U2 182 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 X6R8D5 127 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 MAST4O15021 2626 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 MYMXA0A1B0GTQ4 84 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 TIMM21Q9BVV7 248 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 COX11Q9Y6N1 276 aa15.29■□□□□ 0.04
SNRNP25-201ENST00000293861 ZNF25P17030 456 aaPredicted RBP15.28■□□□□ 0.04
SNRNP25-201ENST00000293861 SHISA2Q6UWI4 295 aa15.28■□□□□ 0.04
SNRNP25-201ENST00000293861 C3orf56Q8N813 242 aa15.27■□□□□ 0.04
SNRNP25-201ENST00000293861 ZMAT5Q9UDW3 170 aaKnown RBP15.27■□□□□ 0.04
SNRNP25-201ENST00000293861 TMEM170BQ5T4T1 132 aa15.27■□□□□ 0.03
SNRNP25-201ENST00000293861 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.26■□□□□ 0.03
SNRNP25-201ENST00000293861 IGKV2-29A2NJV5 120 aaPredicted RBP15.26■□□□□ 0.03
SNRNP25-201ENST00000293861 TAX1BP3O14907 124 aa15.26■□□□□ 0.03
SNRNP25-201ENST00000293861 TAL2Q16559 108 aa15.26■□□□□ 0.03
SNRNP25-201ENST00000293861 MRPS36P82909 103 aaKnown RBP15.25■□□□□ 0.03
SNRNP25-201ENST00000293861 CEMP1Q6PRD7 247 aaPredicted RBP15.25■□□□□ 0.03
SNRNP25-201ENST00000293861 A6NDN8 102 aa15.25■□□□□ 0.03
SNRNP25-201ENST00000293861 GAGE1Q13065 139 aa15.25■□□□□ 0.03
SNRNP25-201ENST00000293861 FHL2Q14192 279 aa15.25■□□□□ 0.03
SNRNP25-201ENST00000293861 TRGV4A0A0C4DH28 118 aa15.24■□□□□ 0.03
SNRNP25-201ENST00000293861 GAGE12JA6NER3 117 aa15.24■□□□□ 0.03
SNRNP25-201ENST00000293861 GAGE4Q13068 117 aa15.24■□□□□ 0.03
SNRNP25-201ENST00000293861 GAGE5Q13069 117 aa15.24■□□□□ 0.03
SNRNP25-201ENST00000293861 GAGE13Q4V321 117 aa15.24■□□□□ 0.03
SNRNP25-201ENST00000293861 GTSF1LQ9H1H1 148 aa15.24■□□□□ 0.03
SNRNP25-201ENST00000293861 A0A0J9YXV3 536 aa15.23■□□□□ 0.03
SNRNP25-201ENST00000293861 ZNF22P17026 224 aaPredicted RBP15.23■□□□□ 0.03
SNRNP25-201ENST00000293861 PRIMA1Q86XR5 153 aa15.23■□□□□ 0.03
SNRNP25-201ENST00000293861 TMEM223A0PJW6 202 aa15.23■□□□□ 0.03
SNRNP25-201ENST00000293861 NTM-AS1Q6ZSK4 140 aa15.23■□□□□ 0.03
SNRNP25-201ENST00000293861 LINC00469Q8N7U9 141 aa15.23■□□□□ 0.03
SNRNP25-201ENST00000293861 Q6ZVH6 145 aa15.22■□□□□ 0.03
SNRNP25-201ENST00000293861 SBSPONQ8IVN8 264 aa15.22■□□□□ 0.03
SNRNP25-201ENST00000293861 TM2D2Q9BX73 214 aa15.22■□□□□ 0.03
SNRNP25-201ENST00000293861 CSDC2Q9Y534 153 aaKnown RBP15.22■□□□□ 0.03
SNRNP25-201ENST00000293861 ZNF815PA8K554 130 aa15.21■□□□□ 0.03
SNRNP25-201ENST00000293861 DEFB135Q30KP9 77 aa15.21■□□□□ 0.02
SNRNP25-201ENST00000293861 Q6ZUT4 128 aa15.21■□□□□ 0.02
SNRNP25-201ENST00000293861 IGHV4-30-4P0DP06 118 aa15.2■□□□□ 0.02
SNRNP25-201ENST00000293861 CEND1Q8N111 149 aa15.2■□□□□ 0.02
SNRNP25-201ENST00000293861 TINCRA0A1B0GVN0 87 aa15.19■□□□□ 0.02
SNRNP25-201ENST00000293861 SMAGPQ0VAQ4 97 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms