RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 A0A1B0GW15 77 aa16.69■□□□□ 0.26
PDF-201ENST00000288022 CLPSL2Q6UWE3 100 aa16.69■□□□□ 0.26
PDF-201ENST00000288022 Q8N814 137 aa16.69■□□□□ 0.26
PDF-201ENST00000288022 ST20Q9HBF5 79 aa16.69■□□□□ 0.26
PDF-201ENST00000288022 TRBV6-5A0A0K0K1A5 114 aa16.68■□□□□ 0.26
PDF-201ENST00000288022 LECT2O14960 151 aa16.68■□□□□ 0.26
PDF-201ENST00000288022 PMCHP20382 165 aa16.68■□□□□ 0.26
PDF-201ENST00000288022 MRPL54Q6P161 138 aaKnown RBP16.68■□□□□ 0.26
PDF-201ENST00000288022 LINC00269Q8N2A0 174 aa16.68■□□□□ 0.26
PDF-201ENST00000288022 MAPKAPK5-AS1Q8N8E1 139 aa16.68■□□□□ 0.26
PDF-201ENST00000288022 BAALCQ8WXS3 180 aa16.68■□□□□ 0.26
PDF-201ENST00000288022 SMKR1H3BMG3 65 aa16.67■□□□□ 0.26
PDF-201ENST00000288022 NCR2O95944 276 aa16.67■□□□□ 0.26
PDF-201ENST00000288022 KIAA1109Q2LD37 5005 aa16.66■□□□□ 0.26
PDF-201ENST00000288022 I3L3M4 83 aa16.66■□□□□ 0.26
PDF-201ENST00000288022 APCSP02743 223 aa16.66■□□□□ 0.26
PDF-201ENST00000288022 MT-ND4LP03901 98 aa16.66■□□□□ 0.26
PDF-201ENST00000288022 RPS10P46783 165 aaKnown RBP16.66■□□□□ 0.26
PDF-201ENST00000288022 WFDC2Q14508 124 aa16.66■□□□□ 0.26
PDF-201ENST00000288022 UQCC3Q6UW78 93 aa16.66■□□□□ 0.26
PDF-201ENST00000288022 IGLV5-52A0A0A0MRZ9 124 aa16.65■□□□□ 0.26
PDF-201ENST00000288022 S100A8P05109 93 aa16.65■□□□□ 0.26
PDF-201ENST00000288022 HBBP68871 147 aa16.65■□□□□ 0.26
PDF-201ENST00000288022 MIAQ16674 131 aa16.65■□□□□ 0.26
PDF-201ENST00000288022 FAM104BQ5XKR9 115 aa16.65■□□□□ 0.26
PDF-201ENST00000288022 NTN5Q8WTR8 489 aaPredicted RBP16.65■□□□□ 0.26
PDF-201ENST00000288022 A0A1B0GUV1 79 aa16.64■□□□□ 0.25
PDF-201ENST00000288022 ANAPC16Q96DE5 110 aa16.64■□□□□ 0.25
PDF-201ENST00000288022 TMEM70Q9BUB7 260 aa16.64■□□□□ 0.25
PDF-201ENST00000288022 PRR34Q9NV39 138 aa16.64■□□□□ 0.25
PDF-201ENST00000288022 IGLV4-60A0A075B6I1 120 aa16.63■□□□□ 0.25
PDF-201ENST00000288022 CDK2AP2O75956 126 aa16.63■□□□□ 0.25
PDF-201ENST00000288022 PPP1R17O96001 155 aa16.63■□□□□ 0.25
PDF-201ENST00000288022 MRPL51Q4U2R6 128 aaKnown RBP16.63■□□□□ 0.25
PDF-201ENST00000288022 C20orf203Q8NBC4 194 aa16.63■□□□□ 0.25
PDF-201ENST00000288022 F8W036 122 aa16.62■□□□□ 0.25
PDF-201ENST00000288022 REG3AQ06141 175 aa16.62■□□□□ 0.25
PDF-201ENST00000288022 AMMECR1LQ6DCA0 310 aa16.62■□□□□ 0.25
PDF-201ENST00000288022 TMEM242Q9NWH2 141 aa16.62■□□□□ 0.25
PDF-201ENST00000288022 IGKV2D-29A0A075B6S2 120 aaPredicted RBP16.61■□□□□ 0.25
PDF-201ENST00000288022 IGKV2-29A2NJV5 120 aaPredicted RBP16.61■□□□□ 0.25
PDF-201ENST00000288022 GCSHP23434 173 aa16.61■□□□□ 0.25
PDF-201ENST00000288022 A0A1B0GXF2 115 aa16.6■□□□□ 0.25
PDF-201ENST00000288022 TMEM218A2RU14 115 aa16.6■□□□□ 0.25
PDF-201ENST00000288022 TSHBP01222 138 aa16.6■□□□□ 0.25
PDF-201ENST00000288022 HLA-DQA1P01909 254 aa16.6■□□□□ 0.25
PDF-201ENST00000288022 POLR2KP53803 58 aaKnown RBP16.6■□□□□ 0.25
PDF-201ENST00000288022 COMMD7Q86VX2 200 aa16.6■□□□□ 0.25
PDF-201ENST00000288022 IGLV2-33A0A075B6J2 118 aaPredicted RBP16.59■□□□□ 0.25
PDF-201ENST00000288022 CKS2P33552 79 aa16.59■□□□□ 0.25
PDF-201ENST00000288022 RNASEKQ6P5S7 137 aaKnown RBP16.59■□□□□ 0.25
PDF-201ENST00000288022 ATP5L2Q7Z4Y8 100 aa16.59■□□□□ 0.25
PDF-201ENST00000288022 NRACQ8N912 160 aa16.59■□□□□ 0.25
PDF-201ENST00000288022 HERC2O95714 4834 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 IGLV10-54A0A075B6I4 117 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 TRBV27A0A0K0K1C4 114 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 LINC00862A6NCI5 91 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 H7C423 109 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 ADCYAP1P18509 176 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 KRTAP10-1P60331 282 aa16.58■□□□□ 0.24
PDF-201ENST00000288022 SUMO2P61956 95 aaKnown RBP16.58■□□□□ 0.24
PDF-201ENST00000288022 VCYO14598 125 aa16.57■□□□□ 0.24
PDF-201ENST00000288022 FGF6P10767 208 aa16.56■□□□□ 0.24
PDF-201ENST00000288022 FCER1GP30273 86 aa16.56■□□□□ 0.24
PDF-201ENST00000288022 TRAV8-4A0A0B4J246 113 aa16.54■□□□□ 0.24
PDF-201ENST00000288022 IGKV3OR2-268A0A0C4DH90 116 aa16.54■□□□□ 0.24
PDF-201ENST00000288022 D6R8Y8 96 aa16.54■□□□□ 0.24
PDF-201ENST00000288022 KIR2DL4Q99706 377 aa16.54■□□□□ 0.24
PDF-201ENST00000288022 LRP1BQ9NZR2 4599 aa16.53■□□□□ 0.24
PDF-201ENST00000288022 ESDP10768 282 aa16.53■□□□□ 0.24
PDF-201ENST00000288022 C14orf177Q52M58 125 aa16.53■□□□□ 0.24
PDF-201ENST00000288022 TMEM101Q96IK0 257 aa16.53■□□□□ 0.24
PDF-201ENST00000288022 BTF3L4Q96K17 158 aa16.53■□□□□ 0.24
PDF-201ENST00000288022 DNAH5Q8TE73 4624 aa16.52■□□□□ 0.24
PDF-201ENST00000288022 TNFRSF6BO95407 300 aa16.52■□□□□ 0.24
PDF-201ENST00000288022 C20orf78Q9BR46 151 aa16.52■□□□□ 0.24
PDF-201ENST00000288022 SEC11CQ9BY50 192 aa16.52■□□□□ 0.24
PDF-201ENST00000288022 C7orf77A4D0Y5 90 aa16.51■□□□□ 0.23
PDF-201ENST00000288022 USP17L23D6RBM5 183 aa16.51■□□□□ 0.23
PDF-201ENST00000288022 ZNF25P17030 456 aaPredicted RBP16.51■□□□□ 0.23
PDF-201ENST00000288022 KRTAP26-1Q6PEX3 210 aa16.51■□□□□ 0.23
PDF-201ENST00000288022 TRBV24-1A0A075B6N3 115 aa16.5■□□□□ 0.23
PDF-201ENST00000288022 PPBPP02775 128 aa16.5■□□□□ 0.23
PDF-201ENST00000288022 OR5A1Q8NGJ0 315 aa16.49■□□□□ 0.23
PDF-201ENST00000288022 NPYP01303 97 aa16.48■□□□□ 0.23
PDF-201ENST00000288022 ORMDL3Q8N138 153 aa16.48■□□□□ 0.23
PDF-201ENST00000288022 CTDSP1Q9GZU7 261 aa16.48■□□□□ 0.23
PDF-201ENST00000288022 RYR1P21817 5038 aa16.47■□□□□ 0.23
PDF-201ENST00000288022 TMEM136Q6ZRR5 245 aa16.47■□□□□ 0.23
PDF-201ENST00000288022 IMMP2LQ96T52 175 aa16.47■□□□□ 0.23
PDF-201ENST00000288022 RPL32P62910 135 aaKnown RBP16.46■□□□□ 0.23
PDF-201ENST00000288022 PRELID3AQ96N28 172 aa16.46■□□□□ 0.23
PDF-201ENST00000288022 SMIM2Q9BVW6 85 aa16.46■□□□□ 0.23
PDF-201ENST00000288022 PHOX2AO14813 284 aa16.45■□□□□ 0.22
PDF-201ENST00000288022 DGAT2L7PQ6IED9 249 aa16.45■□□□□ 0.22
PDF-201ENST00000288022 MRPL52Q86TS9 123 aaKnown RBP16.45■□□□□ 0.22
PDF-201ENST00000288022 LINC01620Q4KN68 170 aa16.44■□□□□ 0.22
PDF-201ENST00000288022 GAGE12HA6NDE8 117 aa16.43■□□□□ 0.22
PDF-201ENST00000288022 TCAPO15273 167 aa16.43■□□□□ 0.22
PDF-201ENST00000288022 XGP55808 180 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms