RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ST20Q9HBF5 79 aa13.32□□□□□ -0.28
TIMP4-201ENST00000287814 KLK12Q9UKR0 248 aa13.32□□□□□ -0.28
TIMP4-201ENST00000287814 POLR2KP53803 58 aaKnown RBP13.31□□□□□ -0.28
TIMP4-201ENST00000287814 CLRN3Q8NCR9 226 aa13.31□□□□□ -0.28
TIMP4-201ENST00000287814 IMMP2LQ96T52 175 aa13.31□□□□□ -0.28
TIMP4-201ENST00000287814 TMEM70Q9BUB7 260 aa13.31□□□□□ -0.28
TIMP4-201ENST00000287814 CHCHD7Q9BUK0 85 aa13.31□□□□□ -0.28
TIMP4-201ENST00000287814 LAGE3Q14657 143 aa13.31□□□□□ -0.28
TIMP4-201ENST00000287814 BTF3L4Q96K17 158 aa13.31□□□□□ -0.28
TIMP4-201ENST00000287814 DNAH11Q96DT5 4516 aa13.3□□□□□ -0.28
TIMP4-201ENST00000287814 TMEM243Q9BU79 118 aa13.3□□□□□ -0.28
TIMP4-201ENST00000287814 PMCHP20382 165 aa13.29□□□□□ -0.28
TIMP4-201ENST00000287814 CKS2P33552 79 aa13.29□□□□□ -0.28
TIMP4-201ENST00000287814 AMTP48728 403 aa13.29□□□□□ -0.28
TIMP4-201ENST00000287814 RBX1P62877 108 aa13.29□□□□□ -0.28
TIMP4-201ENST00000287814 I3L3M4 83 aa13.28□□□□□ -0.28
TIMP4-201ENST00000287814 TMEM242Q9NWH2 141 aa13.28□□□□□ -0.28
TIMP4-201ENST00000287814 BIRC6Q9NR09 4857 aa13.28□□□□□ -0.28
TIMP4-201ENST00000287814 D6R8Y8 96 aa13.28□□□□□ -0.28
TIMP4-201ENST00000287814 TSHBP01222 138 aa13.28□□□□□ -0.28
TIMP4-201ENST00000287814 TRBV27A0A0K0K1C4 114 aa13.27□□□□□ -0.29
TIMP4-201ENST00000287814 SUMO2P61956 95 aaKnown RBP13.27□□□□□ -0.29
TIMP4-201ENST00000287814 RHEBQ15382 184 aa13.27□□□□□ -0.29
TIMP4-201ENST00000287814 UBE2WQ96B02 151 aa13.27□□□□□ -0.29
TIMP4-201ENST00000287814 RPS10P5Q9NQ39 176 aa13.27□□□□□ -0.29
TIMP4-201ENST00000287814 PKHD1P08F94 4074 aa13.27□□□□□ -0.29
TIMP4-201ENST00000287814 TRBV24-1A0A075B6N3 115 aa13.26□□□□□ -0.29
TIMP4-201ENST00000287814 PPP1R17O96001 155 aa13.26□□□□□ -0.29
TIMP4-201ENST00000287814 ANGP03950 147 aaKnown RBP13.26□□□□□ -0.29
TIMP4-201ENST00000287814 ENHOQ6UWT2 76 aa13.26□□□□□ -0.29
TIMP4-201ENST00000287814 TRAV8-3A0A0A6YYJ7 113 aa13.25□□□□□ -0.29
TIMP4-201ENST00000287814 TNFRSF6BO95407 300 aa13.25□□□□□ -0.29
TIMP4-201ENST00000287814 PKIAP61925 76 aa13.25□□□□□ -0.29
TIMP4-201ENST00000287814 ELOBQ15370 118 aa13.25□□□□□ -0.29
TIMP4-201ENST00000287814 IGLV4-60A0A075B6I1 120 aa13.24□□□□□ -0.29
TIMP4-201ENST00000287814 NPYP01303 97 aa13.24□□□□□ -0.29
TIMP4-201ENST00000287814 APCSP02743 223 aa13.24□□□□□ -0.29
TIMP4-201ENST00000287814 C20orf203Q8NBC4 194 aa13.24□□□□□ -0.29
TIMP4-201ENST00000287814 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.24□□□□□ -0.29
TIMP4-201ENST00000287814 IGKV2-29A2NJV5 120 aaPredicted RBP13.24□□□□□ -0.29
TIMP4-201ENST00000287814 VCYO14598 125 aa13.24□□□□□ -0.29
TIMP4-201ENST00000287814 PPBPP02775 128 aa13.23□□□□□ -0.29
TIMP4-201ENST00000287814 ESDP10768 282 aa13.23□□□□□ -0.29
TIMP4-201ENST00000287814 TMEM136Q6ZRR5 245 aa13.23□□□□□ -0.29
TIMP4-201ENST00000287814 C20orf78Q9BR46 151 aa13.23□□□□□ -0.29
TIMP4-201ENST00000287814 TRAV9-1A0A075B6T8 112 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 A0A087WTM6 91 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 A0A1B0GUV1 79 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 UBE2L6O14933 153 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 ORMDL3Q8N138 153 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 LINC00269Q8N2A0 174 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 MAPKAPK5-AS1Q8N8E1 139 aa13.22□□□□□ -0.29
TIMP4-201ENST00000287814 LRCOL1A6NCL2 159 aa13.21□□□□□ -0.29
TIMP4-201ENST00000287814 PSCAO43653 123 aa13.21□□□□□ -0.29
TIMP4-201ENST00000287814 S100PP25815 95 aa13.21□□□□□ -0.29
TIMP4-201ENST00000287814 CLPSL2Q6UWE3 100 aa13.21□□□□□ -0.29
TIMP4-201ENST00000287814 PRR34Q9NV39 138 aa13.21□□□□□ -0.29
TIMP4-201ENST00000287814 KRTAP10-2P60368 255 aa13.21□□□□□ -0.3
TIMP4-201ENST00000287814 PRELID3AQ96N28 172 aa13.21□□□□□ -0.3
TIMP4-201ENST00000287814 RPL32P62910 135 aaKnown RBP13.2□□□□□ -0.3
TIMP4-201ENST00000287814 CBLN2Q8IUK8 224 aa13.2□□□□□ -0.3
TIMP4-201ENST00000287814 TM2D2Q9BX73 214 aa13.2□□□□□ -0.3
TIMP4-201ENST00000287814 IGKV2D-24A0A075B6R9 120 aa13.19□□□□□ -0.3
TIMP4-201ENST00000287814 PHOX2AO14813 284 aa13.19□□□□□ -0.3
TIMP4-201ENST00000287814 Q0VG73 95 aa13.19□□□□□ -0.3
TIMP4-201ENST00000287814 SPATA12Q7Z6I5 190 aa13.19□□□□□ -0.3
TIMP4-201ENST00000287814 SMIM2Q9BVW6 85 aa13.19□□□□□ -0.3
TIMP4-201ENST00000287814 FGF6P10767 208 aa13.18□□□□□ -0.3
TIMP4-201ENST00000287814 FUSP35637 526 aaKnown RBP eCLIP13.18□□□□□ -0.3
TIMP4-201ENST00000287814 WFDC2Q14508 124 aa13.18□□□□□ -0.3
TIMP4-201ENST00000287814 DYNC1H1Q14204 4646 aaKnown RBP13.18□□□□□ -0.3
TIMP4-201ENST00000287814 H7C423 109 aa13.18□□□□□ -0.3
TIMP4-201ENST00000287814 CRPP02741 224 aa13.18□□□□□ -0.3
TIMP4-201ENST00000287814 FCER1GP30273 86 aa13.18□□□□□ -0.3
TIMP4-201ENST00000287814 KIR2DL4Q99706 377 aa13.18□□□□□ -0.3
TIMP4-201ENST00000287814 REG3AQ06141 175 aa13.17□□□□□ -0.3
TIMP4-201ENST00000287814 KIAA1644Q3SXP7 199 aa13.16□□□□□ -0.3
TIMP4-201ENST00000287814 AMMECR1LQ6DCA0 310 aa13.16□□□□□ -0.3
TIMP4-201ENST00000287814 RNASEKQ6P5S7 137 aaKnown RBP13.16□□□□□ -0.3
TIMP4-201ENST00000287814 RMI2Q96E14 147 aa13.16□□□□□ -0.3
TIMP4-201ENST00000287814 MIAQ16674 131 aa13.15□□□□□ -0.3
TIMP4-201ENST00000287814 SMCO4Q9NRQ5 59 aa13.15□□□□□ -0.3
TIMP4-201ENST00000287814 COX11Q9Y6N1 276 aa13.15□□□□□ -0.3
TIMP4-201ENST00000287814 TGIF2-C20orf24A0A0A6YYL0 155 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 PRSS47A8MTI9 375 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 LECT2O14960 151 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 TCAPO15273 167 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 KRTAP26-1Q6PEX3 210 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 BAALCQ8WXS3 180 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 C1orf43Q9BWL3 253 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.31
TIMP4-201ENST00000287814 LOC389332A0A1B0GUA5 103 aa13.14□□□□□ -0.31
TIMP4-201ENST00000287814 LAMTOR2Q9Y2Q5 125 aa13.14□□□□□ -0.31
TIMP4-201ENST00000287814 IGLV10-54A0A075B6I4 117 aa13.13□□□□□ -0.31
TIMP4-201ENST00000287814 EREGO14944 169 aa13.13□□□□□ -0.31
TIMP4-201ENST00000287814 HLA-DQA1P01909 254 aa13.13□□□□□ -0.31
TIMP4-201ENST00000287814 MRPL52Q86TS9 123 aaKnown RBP13.13□□□□□ -0.31
TIMP4-201ENST00000287814 DNAH5Q8TE73 4624 aa13.13□□□□□ -0.31
TIMP4-201ENST00000287814 ZNF25P17030 456 aaPredicted RBP13.12□□□□□ -0.31
TIMP4-201ENST00000287814 C16orf90A8MZG2 172 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms