RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 TRAV41A0A0B4J266 112 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 OVOL1O14753 267 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 Q1RN00 199 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 LINC01356Q8N9X3 169 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 CREBBPQ92793 2442 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 TRAV8-4A0A0B4J246 113 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 TRAV12-3A0A0B4J271 114 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 PAPPA-AS1Q5QFB9 102 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 Q6ZSV7 163 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 POM121L12Q8N7R1 296 aa8.42□□□□□ -1.06
SCLT1-201ENST00000281142 IGHV4OR15-8A0A075B7B6 117 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 A0A087WW49 117 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 VCYO14598 125 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 UBE2E1P51965 193 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 A0A0J9YXV3 536 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 TIMM17AQ99595 171 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 CHCHD5Q9BSY4 110 aa8.41□□□□□ -1.06
SCLT1-201ENST00000281142 NXPH4O95158 308 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 IGKV3-20P01619 116 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 TMEM141Q96I45 108 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 LINC01587Q99440 93 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 ACANP16112 2415 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 PPP1R17O96001 155 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 P0DMU3 169 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 FAM231AP0DMU4 169 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 FAM231CP0DMU5 169 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 MED14OSP0DP75 135 aa8.4□□□□□ -1.06
SCLT1-201ENST00000281142 CUBNO60494 3623 aa8.4□□□□□ -1.07
SCLT1-201ENST00000281142 TRAV12-2A0A075B6T6 113 aa8.4□□□□□ -1.07
SCLT1-201ENST00000281142 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.07
SCLT1-201ENST00000281142 NPC2P61916 151 aa8.4□□□□□ -1.07
SCLT1-201ENST00000281142 AVPP01185 164 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 RPL13AP40429 203 aaKnown RBP8.39□□□□□ -1.07
SCLT1-201ENST00000281142 KRTAP1-1Q07627 177 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 LINC01620Q4KN68 170 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 BRD3OSQ6XYD6 125 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 NPFFO15130 113 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 TRIAP1O43715 76 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 ZNF56Q15929 161 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 APRG1Q8IVJ8 170 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 RHPN1-AS1Q9BWJ2 59 aa8.39□□□□□ -1.07
SCLT1-201ENST00000281142 TRBV27A0A0K0K1C4 114 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 LEPROTO15243 131 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 RNASE13Q5GAN3 156 aaKnown RBP8.38□□□□□ -1.07
SCLT1-201ENST00000281142 MXRA5Q9NR99 2828 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 HIVEP1P15822 2718 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 LY6EQ16553 131 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 C19orf54Q5BKX5 351 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 SMR3AQ99954 134 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 ANK3Q12955 4377 aaKnown RBP8.38□□□□□ -1.07
SCLT1-201ENST00000281142 TRAV8-3A0A0A6YYJ7 113 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 A8MZ25 164 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 LGALS9O00182 355 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 CEMP1Q6PRD7 247 aaPredicted RBP8.38□□□□□ -1.07
SCLT1-201ENST00000281142 SPANXA1Q9NS26 97 aa8.38□□□□□ -1.07
SCLT1-201ENST00000281142 KLLNB2CW77 178 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 H3BMM0 161 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 NDUFA4O00483 81 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 UBE2WQ96B02 151 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 SPXQ9BT56 116 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 A0A0B4J2C4 111 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 A0A0J9YXY3 114 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 TMEM126AQ9H061 195 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 CSPG4Q6UVK1 2322 aa8.37□□□□□ -1.07
SCLT1-201ENST00000281142 TLN2Q9Y4G6 2542 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 FAM223BA6NKX1 122 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 M0QY20 66 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 PRSS2P07478 247 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 ADAMTSL4-AS1Q5T5F5 129 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 FAM223AQ8IWN6 122 aa8.36□□□□□ -1.07
SCLT1-201ENST00000281142 CSDC2Q9Y534 153 aaKnown RBP8.36□□□□□ -1.07
SCLT1-201ENST00000281142 TRBV10-2A0A0K0K1G8 114 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 M0R2P5 195 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 PF4V1P10720 104 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 CLEC2BQ92478 149 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 MOB4Q9Y3A3 225 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 IGLV4-3A0A075B6K6 122 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 IGHV4-38-2P0DP08 117 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 LINC01600Q96MT4 127 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 IGHV3-73A0A0B4J1V6 119 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 J3QLI3 93 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 LINC00694P0DN24 101 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 IGHV3-30-3P0DP02 117 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 LITAFQ99732 161 aa8.35□□□□□ -1.07
SCLT1-201ENST00000281142 IGHV3-16A0A0C4DH30 117 aa8.34□□□□□ -1.07
SCLT1-201ENST00000281142 C20orf203Q8NBC4 194 aa8.34□□□□□ -1.07
SCLT1-201ENST00000281142 TRBV6-5A0A0K0K1A5 114 aa8.34□□□□□ -1.07
SCLT1-201ENST00000281142 BLCAPP62952 87 aa8.34□□□□□ -1.07
SCLT1-201ENST00000281142 FAM104AQ969W3 186 aa8.34□□□□□ -1.07
SCLT1-201ENST00000281142 Q9UF83 564 aa8.34□□□□□ -1.07
SCLT1-201ENST00000281142 H7C423 109 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 PROK1P58294 105 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 NSUN5P1Q3KNT7 163 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 LOC107984640A0A0U1RRK4 108 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 IGHV1-69P01742 117 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 C2orf82Q6UX34 121 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 DUX3Q96PT4 197 aa8.33□□□□□ -1.08
SCLT1-201ENST00000281142 LY6G6DO95868 133 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 259.3 ms