RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 RNF183Q96D59 192 aa10.92□□□□□ -0.66
COPS3-201ENST00000268717 A0A087WX48 190 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 IGIPA6NJ69 53 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 NPSP0C0P6 89 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 DEFB135Q30KP9 77 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 C20orf203Q8NBC4 194 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 LINC00587B1AMM8 73 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
COPS3-201ENST00000268717 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
COPS3-201ENST00000268717 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
COPS3-201ENST00000268717 IGLC3P0DOY3 106 aa10.9□□□□□ -0.66
COPS3-201ENST00000268717 SLC25A29Q8N8R3 303 aa10.9□□□□□ -0.66
COPS3-201ENST00000268717 OR11H2Q8NH07 326 aa10.9□□□□□ -0.66
COPS3-201ENST00000268717 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
COPS3-201ENST00000268717 MAJINQ3KP22 176 aa10.89□□□□□ -0.67
COPS3-201ENST00000268717 DAZ4Q86SG3 579 aaKnown RBP10.89□□□□□ -0.67
COPS3-201ENST00000268717 BAALCQ8WXS3 180 aa10.89□□□□□ -0.67
COPS3-201ENST00000268717 DAZ3Q9NR90 486 aaKnown RBP10.89□□□□□ -0.67
COPS3-201ENST00000268717 UQCR10Q9UDW1 63 aa10.89□□□□□ -0.67
COPS3-201ENST00000268717 PYGO1Q9Y3Y4 419 aa10.89□□□□□ -0.67
COPS3-201ENST00000268717 HUWE1Q7Z6Z7 4374 aaKnown RBP10.89□□□□□ -0.67
COPS3-201ENST00000268717 DPM2O94777 84 aa10.88□□□□□ -0.67
COPS3-201ENST00000268717 PLNP26678 52 aa10.88□□□□□ -0.67
COPS3-201ENST00000268717 COTL1Q14019 142 aa10.88□□□□□ -0.67
COPS3-201ENST00000268717 Q8NAQ8 132 aa10.88□□□□□ -0.67
COPS3-201ENST00000268717 DKK2Q9UBU2 259 aa10.88□□□□□ -0.67
COPS3-201ENST00000268717 Q9UF83 564 aa10.88□□□□□ -0.67
COPS3-201ENST00000268717 F8VRH5 84 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 IGKCP01834 107 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 EMP1P54849 157 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 UBE2D3P61077 147 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 UBE2D2P62837 147 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 RPL39P62891 51 aaKnown RBP10.87□□□□□ -0.67
COPS3-201ENST00000268717 FHL2Q14192 279 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 TRGV4A0A0C4DH28 118 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 IGHV4-28A0A0C4DH34 117 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 hDV102S1A0JD36 115 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 CRYBA4P53673 196 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 PAPPA-AS1Q5QFB9 102 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 ZNRF2Q8NHG8 242 aa10.87□□□□□ -0.67
COPS3-201ENST00000268717 TEX48A0A1B0GUV7 120 aa10.86□□□□□ -0.67
COPS3-201ENST00000268717 PRADC1Q9BSG0 188 aa10.86□□□□□ -0.67
COPS3-201ENST00000268717 CHCHD7Q9BUK0 85 aa10.86□□□□□ -0.67
COPS3-201ENST00000268717 MRPL35Q9NZE8 188 aaKnown RBP10.86□□□□□ -0.67
COPS3-201ENST00000268717 NBEAL2Q6ZNJ1 2754 aa10.86□□□□□ -0.67
COPS3-201ENST00000268717 NHLRC4P0CG21 123 aaPredicted RBP10.85□□□□□ -0.67
COPS3-201ENST00000268717 PMVKQ15126 192 aa10.85□□□□□ -0.67
COPS3-201ENST00000268717 FAM222AQ5U5X8 452 aa10.85□□□□□ -0.67
COPS3-201ENST00000268717 MRPL52Q86TS9 123 aaKnown RBP10.85□□□□□ -0.67
COPS3-201ENST00000268717 SPANXA1Q9NS26 97 aa10.85□□□□□ -0.67
COPS3-201ENST00000268717 CHTOPQ9Y3Y2 248 aaKnown RBP10.85□□□□□ -0.67
COPS3-201ENST00000268717 PRSS29PA6NIE9 313 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 LINC00694P0DN24 101 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 DEFB130BP0DP73 79 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 DEFB130AP0DP74 79 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 GTSF1LQ9H1H1 148 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 HHLA3Q9XRX5 114 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 STAB2Q8WWQ8 2551 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 DEFB104AQ8WTQ1 72 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 TIMM21Q9BVV7 248 aa10.84□□□□□ -0.67
COPS3-201ENST00000268717 SBSPONQ8IVN8 264 aa10.83□□□□□ -0.68
COPS3-201ENST00000268717 PHLDA1Q8WV24 401 aaPredicted RBP10.83□□□□□ -0.68
COPS3-201ENST00000268717 CST9LQ9H4G1 147 aa10.83□□□□□ -0.68
COPS3-201ENST00000268717 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
COPS3-201ENST00000268717 SMAGPQ0VAQ4 97 aa10.82□□□□□ -0.68
COPS3-201ENST00000268717 GAGE1Q13065 139 aa10.82□□□□□ -0.68
COPS3-201ENST00000268717 GAGE4Q13068 117 aa10.82□□□□□ -0.68
COPS3-201ENST00000268717 GAGE5Q13069 117 aa10.82□□□□□ -0.68
COPS3-201ENST00000268717 GAGE13Q4V321 117 aa10.82□□□□□ -0.68
COPS3-201ENST00000268717 IGLV4-3A0A075B6K6 122 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 IGHV3-38A0A0C4DH36 116 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 SPART-AS1P0CW21 52 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 COX8AP10176 69 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 ANKRD39Q53RE8 183 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 TMEM97Q5BJF2 176 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 SLC25A34Q6PIV7 304 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 C14orf144Q96I85 54 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 PRO0255Q9UI72 69 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 UBE2D4Q9Y2X8 147 aa10.81□□□□□ -0.68
COPS3-201ENST00000268717 DNAH7Q8WXX0 4024 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 TENM3Q9P273 2699 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 H7C423 109 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 DAD1P61803 113 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 MRPS36P82909 103 aaKnown RBP10.8□□□□□ -0.68
COPS3-201ENST00000268717 ZC2HC1BQ5TFG8 222 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 STPG4Q8N801 248 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 AMELXQ99217 191 aa10.8□□□□□ -0.68
COPS3-201ENST00000268717 CSDC2Q9Y534 153 aaKnown RBP10.8□□□□□ -0.68
COPS3-201ENST00000268717 IGLV4-69A0A075B6H9 119 aa10.79□□□□□ -0.68
COPS3-201ENST00000268717 DLEU1O43261 78 aa10.79□□□□□ -0.68
COPS3-201ENST00000268717 VCX2Q9H322 139 aa10.79□□□□□ -0.68
COPS3-201ENST00000268717 C11orf68Q9H3H3 251 aaKnown RBP10.79□□□□□ -0.68
COPS3-201ENST00000268717 MRPS16Q9Y3D3 137 aaKnown RBP10.79□□□□□ -0.68
COPS3-201ENST00000268717 ATP5G1P05496 136 aa10.78□□□□□ -0.68
COPS3-201ENST00000268717 HNRNPA3P51991 378 aaKnown RBP10.78□□□□□ -0.68
COPS3-201ENST00000268717 NTM-AS1Q6ZSK4 140 aa10.78□□□□□ -0.68
COPS3-201ENST00000268717 NFE4Q86UQ8 179 aa10.78□□□□□ -0.68
COPS3-201ENST00000268717 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.77□□□□□ -0.68
COPS3-201ENST00000268717 IGKV2-29A2NJV5 120 aaPredicted RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms