RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 NOTCH1P46531 2555 aa11.56□□□□□ -0.56
TPM1-201ENST00000267996 TRAV12-1A0A0B4J245 112 aa11.56□□□□□ -0.56
TPM1-201ENST00000267996 UBE2D3P61077 147 aa11.56□□□□□ -0.56
TPM1-201ENST00000267996 UBE2D2P62837 147 aa11.56□□□□□ -0.56
TPM1-201ENST00000267996 MAJINQ3KP22 176 aa11.56□□□□□ -0.56
TPM1-201ENST00000267996 TMEM141Q96I45 108 aa11.56□□□□□ -0.56
TPM1-201ENST00000267996 DEFB4AO15263 64 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 SPATA45Q537H7 98 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 Q6ZN92 141 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 A0A087WX48 190 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 COTL1Q14019 142 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 DAZ4Q86SG3 579 aaKnown RBP11.55□□□□□ -0.56
TPM1-201ENST00000267996 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
TPM1-201ENST00000267996 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 CHCHD7Q9BUK0 85 aa11.55□□□□□ -0.56
TPM1-201ENST00000267996 DAZ3Q9NR90 486 aaKnown RBP11.55□□□□□ -0.56
TPM1-201ENST00000267996 LINC00694P0DN24 101 aa11.54□□□□□ -0.56
TPM1-201ENST00000267996 IGHV3-38A0A0C4DH36 116 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 GAGE12JA6NER3 117 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 SPART-AS1P0CW21 52 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 GAGE1Q13065 139 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 GAGE4Q13068 117 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 GAGE5Q13069 117 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 GAGE13Q4V321 117 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 PRADC1Q9BSG0 188 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 CELA1Q9UNI1 258 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 HHLA3Q9XRX5 114 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 NBEAL1Q6ZS30 2694 aa11.53□□□□□ -0.56
TPM1-201ENST00000267996 LOC100131303A0A0U1RQF7 123 aa11.52□□□□□ -0.56
TPM1-201ENST00000267996 hDV102S1A0JD36 115 aa11.52□□□□□ -0.56
TPM1-201ENST00000267996 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.56
TPM1-201ENST00000267996 MGAM2Q2M2H8 2515 aa11.52□□□□□ -0.56
TPM1-201ENST00000267996 CRYBA4P53673 196 aa11.52□□□□□ -0.57
TPM1-201ENST00000267996 DAD1P61803 113 aa11.52□□□□□ -0.57
TPM1-201ENST00000267996 RETNQ9HD89 108 aa11.52□□□□□ -0.57
TPM1-201ENST00000267996 MRPL35Q9NZE8 188 aaKnown RBP11.52□□□□□ -0.57
TPM1-201ENST00000267996 DPM2O94777 84 aa11.51□□□□□ -0.57
TPM1-201ENST00000267996 NPSP0C0P6 89 aa11.51□□□□□ -0.57
TPM1-201ENST00000267996 PRO0255Q9UI72 69 aa11.51□□□□□ -0.57
TPM1-201ENST00000267996 TEX48A0A1B0GUV7 120 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 PRSS29PA6NIE9 313 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 HSBP1L1C9JCN9 74 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 F8VRH5 84 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 K7EIL1 84 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 DDTP30046 118 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 NTM-AS1Q6ZSK4 140 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 GTSF1LQ9H1H1 148 aa11.5□□□□□ -0.57
TPM1-201ENST00000267996 IGKCP01834 107 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 IGLC3P0DOY3 106 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 PMVKQ15126 192 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 IGLV4-3A0A075B6K6 122 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 LINC00587B1AMM8 73 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 FAM104AQ969W3 186 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 MIEN1Q9BRT3 115 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 C11orf68Q9H3H3 251 aaKnown RBP11.49□□□□□ -0.57
TPM1-201ENST00000267996 CST9LQ9H4G1 147 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 SPANXA1Q9NS26 97 aa11.49□□□□□ -0.57
TPM1-201ENST00000267996 CHTOPQ9Y3Y2 248 aaKnown RBP11.49□□□□□ -0.57
TPM1-201ENST00000267996 PLNP26678 52 aa11.48□□□□□ -0.57
TPM1-201ENST00000267996 SBSPONQ8IVN8 264 aa11.48□□□□□ -0.57
TPM1-201ENST00000267996 TIMM21Q9BVV7 248 aa11.48□□□□□ -0.57
TPM1-201ENST00000267996 UBE2D4Q9Y2X8 147 aa11.48□□□□□ -0.57
TPM1-201ENST00000267996 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.47□□□□□ -0.57
TPM1-201ENST00000267996 IGKV2-29A2NJV5 120 aaPredicted RBP11.47□□□□□ -0.57
TPM1-201ENST00000267996 PRB2P02812 416 aaPredicted RBP11.47□□□□□ -0.57
TPM1-201ENST00000267996 ATP5G1P05496 136 aa11.47□□□□□ -0.57
TPM1-201ENST00000267996 LURAP1LQ8IV03 231 aa11.47□□□□□ -0.57
TPM1-201ENST00000267996 OPRPNQ99935 248 aaPredicted RBP11.47□□□□□ -0.57
TPM1-201ENST00000267996 ANKRD39Q53RE8 183 aa11.46□□□□□ -0.57
TPM1-201ENST00000267996 ZC2HC1BQ5TFG8 222 aa11.46□□□□□ -0.57
TPM1-201ENST00000267996 STPG4Q8N801 248 aa11.46□□□□□ -0.57
TPM1-201ENST00000267996 GYPEP15421 78 aa11.46□□□□□ -0.58
TPM1-201ENST00000267996 PAPPA-AS1Q5QFB9 102 aa11.46□□□□□ -0.58
TPM1-201ENST00000267996 VSIG2Q96IQ7 327 aa11.46□□□□□ -0.58
TPM1-201ENST00000267996 AMELXQ99217 191 aa11.46□□□□□ -0.58
TPM1-201ENST00000267996 UQCR10Q9UDW1 63 aa11.46□□□□□ -0.58
TPM1-201ENST00000267996 PAX4O43316 350 aa11.45□□□□□ -0.58
TPM1-201ENST00000267996 C12orf74Q32Q52 190 aa11.45□□□□□ -0.58
TPM1-201ENST00000267996 C14orf144Q96I85 54 aa11.45□□□□□ -0.58
TPM1-201ENST00000267996 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
TPM1-201ENST00000267996 MRPS36P82909 103 aaKnown RBP11.44□□□□□ -0.58
TPM1-201ENST00000267996 TMEM97Q5BJF2 176 aa11.44□□□□□ -0.58
TPM1-201ENST00000267996 CEMP1Q6PRD7 247 aaPredicted RBP11.44□□□□□ -0.58
TPM1-201ENST00000267996 MRPL52Q86TS9 123 aaKnown RBP11.44□□□□□ -0.58
TPM1-201ENST00000267996 TM2D3Q9BRN9 247 aa11.44□□□□□ -0.58
TPM1-201ENST00000267996 TMEM243Q9BU79 118 aa11.43□□□□□ -0.58
TPM1-201ENST00000267996 VCX2Q9H322 139 aa11.43□□□□□ -0.58
TPM1-201ENST00000267996 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
TPM1-201ENST00000267996 HUWE1Q7Z6Z7 4374 aaKnown RBP11.43□□□□□ -0.58
TPM1-201ENST00000267996 ATP6V0E2Q8NHE4 81 aa11.43□□□□□ -0.58
TPM1-201ENST00000267996 TRBV25-1A0A075B6N4 114 aa11.42□□□□□ -0.58
TPM1-201ENST00000267996 TRBV6-8A0A0A6YYG3 113 aa11.42□□□□□ -0.58
TPM1-201ENST00000267996 H7C423 109 aa11.42□□□□□ -0.58
TPM1-201ENST00000267996 SPATA25Q9BR10 227 aa11.42□□□□□ -0.58
TPM1-201ENST00000267996 TENM3Q9P273 2699 aa11.41□□□□□ -0.58
TPM1-201ENST00000267996 C11orf86A6NJI1 115 aa11.41□□□□□ -0.58
TPM1-201ENST00000267996 F5H768 121 aa11.41□□□□□ -0.58
TPM1-201ENST00000267996 COX8AP10176 69 aa11.41□□□□□ -0.58
TPM1-201ENST00000267996 FGF6P10767 208 aa11.41□□□□□ -0.58
TPM1-201ENST00000267996 NFE4Q86UQ8 179 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms