RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 K7ERU9 68 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 CD7P09564 240 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 GCSHP23434 173 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 C9orf66Q5T8R8 295 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 C2orf66Q6UXQ4 117 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 FOXI2Q6ZQN5 318 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 GTSCR1Q86UQ5 136 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 DCANP1Q8TF63 244 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 RAX2Q96IS3 184 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 UBE2E2Q96LR5 201 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 CHAC1Q9BUX1 264 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 CSTL1Q9H114 145 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 MRPL35Q9NZE8 188 aaKnown RBP5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 PEMTQ9UBM1 199 aa5.18□□□□□ -1.58
SMARCE1-201ENST00000264640 HECTD4Q9Y4D8 3996 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 AGRNO00468 2067 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 ABCA13Q86UQ4 5058 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 TRAV12-3A0A0B4J271 114 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 TRBV6-5A0A0K0K1A5 114 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 CCL24O00175 119 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 GNRH2O43555 120 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 RNASE3P12724 160 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 CDKN1BP46527 198 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 RHOHQ15669 191 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 TRPT1Q86TN4 253 aaKnown RBP5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 PCP2Q8IVA1 136 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 CEND1Q8N111 149 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 RNF152Q8N8N0 203 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 TM2D2Q9BX73 214 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 HHLA3Q9XRX5 114 aa5.17□□□□□ -1.58
SMARCE1-201ENST00000264640 TRBV25-1A0A075B6N4 114 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 MYMXA0A1B0GTQ4 84 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 F6UB75 175 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 H3BUT2 72 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 K7EP34 96 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 GAS8-AS1O95177 125 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 ZNF688P0C7X2 276 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 LYRM7Q5U5X0 104 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 Q6ZVH6 145 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 NEXN-AS1Q8NBZ9 246 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 RPL39LQ96EH5 51 aaKnown RBP5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 C9orf85Q96MD7 179 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 HIST1H4GQ99525 98 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 TIMM17AQ99595 171 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 TM2D3Q9BRN9 247 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 DNAH10Q8IVF4 4471 aa5.16□□□□□ -1.58
SMARCE1-201ENST00000264640 TRAV8-6A0A0B4J262 113 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 IGHV3-16A0A0C4DH30 117 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 A0A1W2PPM0 123 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 GAGE12BA1L429 117 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 PRSS29PA6NIE9 313 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 E9PLD3 99 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 LY6G6CO95867 125 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 POLR2KP53803 58 aaKnown RBP5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 SYNJ2BPP57105 145 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 PMVKQ15126 192 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 ZNF56Q15929 161 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 PIK3CD-AS1Q5SR53 167 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 SUMO4Q6EEV6 95 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 BAALCQ8WXS3 180 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 LINC00476Q8WZB0 136 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 TP73-AS1Q9UF72 201 aa5.15□□□□□ -1.59
SMARCE1-201ENST00000264640 TRBV27A0A0K0K1C4 114 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 SDHAF1A6NFY7 115 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 TCTAP57738 103 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 ZFP2Q6ZN57 461 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 Q6ZQT7 251 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 DYNLRB2Q8TF09 96 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 PTH2Q96A98 100 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 RAB37Q96AX2 223 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 CST9LQ9H4G1 147 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 TP53TG1Q9Y2A0 90 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 SPCS1Q9Y6A9 102 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 KIF25-AS1Q9Y6Z4 181 aa5.14□□□□□ -1.59
SMARCE1-201ENST00000264640 IGKV2D-26A0A0A0MRZ7 120 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 A8MWV9 139 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 J3QR89 54 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 CMC4P56277 68 aaPredicted RBP5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 LINC00315P59091 139 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 DEFB1P60022 68 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 KRTAP10-2P60368 255 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 ZNF415Q09FC8 603 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 OCIAD2Q56VL3 154 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 UFSP1Q6NVU6 142 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 SCGB1D4Q6XE38 83 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 SPXQ9BT56 116 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 RETNQ9HD89 108 aa5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 NHP2Q9NX24 153 aaKnown RBP5.13□□□□□ -1.59
SMARCE1-201ENST00000264640 A0A087WWL8 130 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 TRAV25A0A0B4J276 109 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 ZNF815PA8K554 130 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 A8MTW9 85 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 I3L3M4 83 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 RHODO00212 210 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 IGKV3-20P01619 116 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 IGHV4-30-4P0DP06 118 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 CRYBA4P53673 196 aa5.12□□□□□ -1.59
SMARCE1-201ENST00000264640 FXYD2P54710 66 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 144.7 ms