RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 CRIP2P52943 208 aaPredicted RBP12.46□□□□□ -0.41
PHRF1-201ENST00000264555 CEP350Q5VT06 3117 aa12.46□□□□□ -0.41
PHRF1-201ENST00000264555 C1orf43Q9BWL3 253 aa12.46□□□□□ -0.42
PHRF1-201ENST00000264555 WNK1Q9H4A3 2382 aa12.46□□□□□ -0.42
PHRF1-201ENST00000264555 ADAMTS20P59510 1910 aa12.46□□□□□ -0.42
PHRF1-201ENST00000264555 AVPP01185 164 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 CRYBA4P53673 196 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 NACAE9PAV3 2078 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 H0YGX0 51 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 WFDC2Q14508 124 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 TRBV6-5A0A0K0K1A5 114 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 LINC00310P59036 64 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 DCANP1Q8TF63 244 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 TRBV27A0A0K0K1C4 114 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 HIST2H2BCQ6DN03 193 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 LINC01620Q4KN68 170 aa12.45□□□□□ -0.42
PHRF1-201ENST00000264555 UBL5Q9BZL1 73 aa12.44□□□□□ -0.42
PHRF1-201ENST00000264555 F8W735 103 aaPredicted RBP12.44□□□□□ -0.42
PHRF1-201ENST00000264555 CFAP126Q5VTH2 177 aa12.44□□□□□ -0.42
PHRF1-201ENST00000264555 TEN1Q86WV5 123 aa12.44□□□□□ -0.42
PHRF1-201ENST00000264555 TP73-AS1Q9UF72 201 aa12.44□□□□□ -0.42
PHRF1-201ENST00000264555 DEFB4AO15263 64 aa12.43□□□□□ -0.42
PHRF1-201ENST00000264555 TM2D2Q9BX73 214 aa12.43□□□□□ -0.42
PHRF1-201ENST00000264555 CCDC168Q8NDH2 2452 aa12.43□□□□□ -0.42
PHRF1-201ENST00000264555 IGLV4-3A0A075B6K6 122 aa12.43□□□□□ -0.42
PHRF1-201ENST00000264555 ORMDL1Q9P0S3 153 aa12.43□□□□□ -0.42
PHRF1-201ENST00000264555 RNASE8Q8TDE3 154 aaKnown RBP12.42□□□□□ -0.42
PHRF1-201ENST00000264555 IGKV2D-26A0A0A0MRZ7 120 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 LINC00467Q9BRT7 94 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 TNRC6BQ9UPQ9 1833 aaKnown RBP12.42□□□□□ -0.42
PHRF1-201ENST00000264555 NFE4Q86UQ8 179 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 MRGPRG-AS1Q2M3A8 158 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 IGHV3-30P01768 117 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 IGHV3-33P01772 117 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 IGHV3-30-5P0DP03 117 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 MRAPQ8TCY5 172 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 DSCR8Q96T75 97 aa12.42□□□□□ -0.42
PHRF1-201ENST00000264555 A0A0J9YXY3 114 aa12.41□□□□□ -0.42
PHRF1-201ENST00000264555 CXCL5P42830 114 aa12.41□□□□□ -0.42
PHRF1-201ENST00000264555 CAMK2N2Q96S95 79 aa12.41□□□□□ -0.42
PHRF1-201ENST00000264555 SMIM9A6NGZ8 99 aa12.41□□□□□ -0.42
PHRF1-201ENST00000264555 MIAQ16674 131 aa12.41□□□□□ -0.42
PHRF1-201ENST00000264555 ZNF22P17026 224 aaPredicted RBP12.4□□□□□ -0.42
PHRF1-201ENST00000264555 RS1O15537 224 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 SPANXCQ9NY87 97 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 TMEM223A0PJW6 202 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 BRI3O95415 125 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 C9orf85Q96MD7 179 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 ACYP1P07311 99 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 C15orf53Q8NAA6 179 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 Q9HAA7 133 aa12.4□□□□□ -0.42
PHRF1-201ENST00000264555 COX8CQ7Z4L0 72 aa12.39□□□□□ -0.43
PHRF1-201ENST00000264555 MAPKAPK5-AS1Q8N8E1 139 aa12.39□□□□□ -0.43
PHRF1-201ENST00000264555 H7C423 109 aa12.39□□□□□ -0.43
PHRF1-201ENST00000264555 GAS8-AS1O95177 125 aa12.39□□□□□ -0.43
PHRF1-201ENST00000264555 MIR7-3HGQ8N6C7 128 aa12.39□□□□□ -0.43
PHRF1-201ENST00000264555 PYGO1Q9Y3Y4 419 aa12.38□□□□□ -0.43
PHRF1-201ENST00000264555 ANKRD11Q6UB99 2663 aaPredicted RBP12.38□□□□□ -0.43
PHRF1-201ENST00000264555 C18orf65Q6ZTR6 163 aa12.38□□□□□ -0.43
PHRF1-201ENST00000264555 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
PHRF1-201ENST00000264555 POLR2KP53803 58 aaKnown RBP12.38□□□□□ -0.43
PHRF1-201ENST00000264555 URB1-AS1Q96HZ7 61 aa12.38□□□□□ -0.43
PHRF1-201ENST00000264555 A0A0B4J2C4 111 aa12.37□□□□□ -0.43
PHRF1-201ENST00000264555 TRBV10-2A0A0K0K1G8 114 aa12.37□□□□□ -0.43
PHRF1-201ENST00000264555 LYRM9A8MSI8 78 aa12.37□□□□□ -0.43
PHRF1-201ENST00000264555 PROK1P58294 105 aa12.37□□□□□ -0.43
PHRF1-201ENST00000264555 CDKN2A-AS1Q9UH64 79 aa12.37□□□□□ -0.43
PHRF1-201ENST00000264555 CCL18P55774 89 aa12.36□□□□□ -0.43
PHRF1-201ENST00000264555 FOXI1Q12951 378 aa12.36□□□□□ -0.43
PHRF1-201ENST00000264555 SPANXB1Q9NS25 103 aaPredicted RBP12.36□□□□□ -0.43
PHRF1-201ENST00000264555 CRYGDP07320 174 aa12.36□□□□□ -0.43
PHRF1-201ENST00000264555 TSHBP01222 138 aa12.36□□□□□ -0.43
PHRF1-201ENST00000264555 TMEM126AQ9H061 195 aa12.36□□□□□ -0.43
PHRF1-201ENST00000264555 HIVEP3Q5T1R4 2406 aa12.36□□□□□ -0.43
PHRF1-201ENST00000264555 NDUFA1O15239 70 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 HAMPP81172 84 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 FAM222AQ5U5X8 452 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 KLK12Q9UKR0 248 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 TRBV6-4A0A1B0GX49 114 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 ZNF580Q9UK33 172 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 H3BT86 120 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 Q8N976 141 aa12.35□□□□□ -0.43
PHRF1-201ENST00000264555 INAFM1C9JVW0 142 aa12.34□□□□□ -0.43
PHRF1-201ENST00000264555 SPAG11BQ08648 103 aa12.34□□□□□ -0.43
PHRF1-201ENST00000264555 C2orf91Q6ZV80 131 aa12.34□□□□□ -0.43
PHRF1-201ENST00000264555 TRACP01848 142 aa12.34□□□□□ -0.43
PHRF1-201ENST00000264555 CLEC2BQ92478 149 aa12.34□□□□□ -0.43
PHRF1-201ENST00000264555 TIRAPP58753 221 aa12.33□□□□□ -0.43
PHRF1-201ENST00000264555 RAI1Q7Z5J4 1906 aaPredicted RBP12.33□□□□□ -0.44
PHRF1-201ENST00000264555 SONP18583 2426 aaKnown RBP12.33□□□□□ -0.44
PHRF1-201ENST00000264555 G3V4G9 280 aa12.33□□□□□ -0.44
PHRF1-201ENST00000264555 HIST2H2BDQ6DRA6 164 aa12.33□□□□□ -0.44
PHRF1-201ENST00000264555 PIK3CD-AS1Q5SR53 167 aa12.32□□□□□ -0.44
PHRF1-201ENST00000264555 TCL1BO95988 128 aa12.32□□□□□ -0.44
PHRF1-201ENST00000264555 CITED1Q99966 193 aa12.32□□□□□ -0.44
PHRF1-201ENST00000264555 TRAV26-1A0A087WT03 109 aa12.32□□□□□ -0.44
PHRF1-201ENST00000264555 HILS1P60008 231 aa12.32□□□□□ -0.44
PHRF1-201ENST00000264555 MYO9AB2RTY4 2548 aa12.31□□□□□ -0.44
PHRF1-201ENST00000264555 EDN2P20800 178 aa12.31□□□□□ -0.44
PHRF1-201ENST00000264555 KRTAP10-9P60411 292 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms