RNA–Protein interactions for RNA: ENST00000262659.12

CCM2L-201, Transcript of CCM2 like scaffold protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCM2L, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2L-201ENST00000262659 UPK3BQ9BT76 320 aa17.53■□□□□ 0.4
CCM2L-201ENST00000262659 UNQ9165/PRO28630Q6UXU0 137 aa17.53■□□□□ 0.4
CCM2L-201ENST00000262659 KLK9Q2XQG4 91 aa17.52■□□□□ 0.4
CCM2L-201ENST00000262659 KLK9Q9UKQ9 250 aa17.52■□□□□ 0.4
CCM2L-201ENST00000262659 RNF152Q8N8N0 203 aa17.52■□□□□ 0.39
CCM2L-201ENST00000262659 SPTBN2O15020 2390 aa17.51■□□□□ 0.39
CCM2L-201ENST00000262659 LY6HO94772 140 aa17.51■□□□□ 0.39
CCM2L-201ENST00000262659 PIEZO2Q9H5I5 2752 aa17.5■□□□□ 0.39
CCM2L-201ENST00000262659 KLLNB2CW77 178 aa17.5■□□□□ 0.39
CCM2L-201ENST00000262659 TIMM17BO60830 172 aa17.49■□□□□ 0.39
CCM2L-201ENST00000262659 SERP2Q8N6R1 65 aa17.49■□□□□ 0.39
CCM2L-201ENST00000262659 FAM218AQ96MZ4 157 aa17.49■□□□□ 0.39
CCM2L-201ENST00000262659 IGKV3D-7A0A0C4DH55 119 aa17.48■□□□□ 0.39
CCM2L-201ENST00000262659 B9A039 149 aa17.48■□□□□ 0.39
CCM2L-201ENST00000262659 APC2O95996 2303 aa17.48■□□□□ 0.39
CCM2L-201ENST00000262659 INAFM2P0DMQ5 153 aa17.48■□□□□ 0.39
CCM2L-201ENST00000262659 MINOS1Q5TGZ0 78 aa17.48■□□□□ 0.39
CCM2L-201ENST00000262659 LINC00308Q8TCZ7 52 aa17.48■□□□□ 0.39
CCM2L-201ENST00000262659 A0A0U1RRA0 63 aa17.47■□□□□ 0.39
CCM2L-201ENST00000262659 PYGO1Q9Y3Y4 419 aa17.47■□□□□ 0.39
CCM2L-201ENST00000262659 A0A087WVE0 104 aa17.47■□□□□ 0.39
CCM2L-201ENST00000262659 TINCRA0A1B0GVN0 87 aa17.46■□□□□ 0.38
CCM2L-201ENST00000262659 TRBV12-3P01733 135 aa17.45■□□□□ 0.38
CCM2L-201ENST00000262659 C9orf85Q96MD7 179 aa17.45■□□□□ 0.38
CCM2L-201ENST00000262659 IGHV3-16A0A0C4DH30 117 aa17.45■□□□□ 0.38
CCM2L-201ENST00000262659 Q9HAA7 133 aa17.45■□□□□ 0.38
CCM2L-201ENST00000262659 FAM222AQ5U5X8 452 aa17.43■□□□□ 0.38
CCM2L-201ENST00000262659 ZNF625Q96I27 306 aaPredicted RBP17.43■□□□□ 0.38
CCM2L-201ENST00000262659 NDUFA1O15239 70 aa17.42■□□□□ 0.38
CCM2L-201ENST00000262659 IGHG2P01859 326 aa17.42■□□□□ 0.38
CCM2L-201ENST00000262659 CIRBPQ14011 172 aaKnown RBP17.41■□□□□ 0.38
CCM2L-201ENST00000262659 SOSTDC1Q6X4U4 206 aa17.41■□□□□ 0.38
CCM2L-201ENST00000262659 MALP21145 153 aa17.4■□□□□ 0.38
CCM2L-201ENST00000262659 LINC01561Q8N1V8 128 aa17.4■□□□□ 0.38
CCM2L-201ENST00000262659 CDKN2A-AS1Q9UH64 79 aa17.4■□□□□ 0.38
CCM2L-201ENST00000262659 ZFHX3Q15911 3703 aa17.39■□□□□ 0.37
CCM2L-201ENST00000262659 C10orf105Q8TEF2 133 aa17.39■□□□□ 0.37
CCM2L-201ENST00000262659 ASH1LQ9NR48 2969 aaKnown RBP17.39■□□□□ 0.37
CCM2L-201ENST00000262659 USP17L23D6RBM5 183 aa17.39■□□□□ 0.37
CCM2L-201ENST00000262659 C9orf129Q5T035 196 aaKnown RBP17.39■□□□□ 0.37
CCM2L-201ENST00000262659 PRIMA1Q86XR5 153 aa17.39■□□□□ 0.37
CCM2L-201ENST00000262659 MINOS1-NBL1R4GNA1 71 aa17.39■□□□□ 0.37
CCM2L-201ENST00000262659 DNAL4O96015 105 aa17.38■□□□□ 0.37
CCM2L-201ENST00000262659 HOXD3P31249 432 aaPredicted RBP17.38■□□□□ 0.37
CCM2L-201ENST00000262659 TRAV12-2A0A075B6T6 113 aa17.38■□□□□ 0.37
CCM2L-201ENST00000262659 SYNJ2BPP57105 145 aa17.38■□□□□ 0.37
CCM2L-201ENST00000262659 Q9H8V8 135 aa17.37■□□□□ 0.37
CCM2L-201ENST00000262659 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.37■□□□□ 0.37
CCM2L-201ENST00000262659 MRAPQ8TCY5 172 aa17.37■□□□□ 0.37
CCM2L-201ENST00000262659 LINC00846Q9NV44 126 aa17.37■□□□□ 0.37
CCM2L-201ENST00000262659 IGHV3-73A0A0B4J1V6 119 aa17.36■□□□□ 0.37
CCM2L-201ENST00000262659 Q6JHZ5 121 aa17.36■□□□□ 0.37
CCM2L-201ENST00000262659 DEFB124Q8NES8 71 aa17.36■□□□□ 0.37
CCM2L-201ENST00000262659 C14orf132Q9NPU4 83 aa17.36■□□□□ 0.37
CCM2L-201ENST00000262659 DEFB123Q8N688 67 aa17.36■□□□□ 0.37
CCM2L-201ENST00000262659 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP17.36■□□□□ 0.37
CCM2L-201ENST00000262659 FHL2Q14192 279 aa17.35■□□□□ 0.37
CCM2L-201ENST00000262659 NDUFA4O00483 81 aa17.34■□□□□ 0.37
CCM2L-201ENST00000262659 PROK1P58294 105 aa17.34■□□□□ 0.37
CCM2L-201ENST00000262659 UBE2D4Q9Y2X8 147 aa17.34■□□□□ 0.37
CCM2L-201ENST00000262659 SPTBN1Q01082 2364 aaKnown RBP17.33■□□□□ 0.36
CCM2L-201ENST00000262659 IGKV2D-29A0A075B6S2 120 aaPredicted RBP17.33■□□□□ 0.36
CCM2L-201ENST00000262659 IGKV2-29A2NJV5 120 aaPredicted RBP17.33■□□□□ 0.36
CCM2L-201ENST00000262659 IGKV3-20P01619 116 aa17.33■□□□□ 0.36
CCM2L-201ENST00000262659 RHPN1-AS1Q9BWJ2 59 aa17.32■□□□□ 0.36
CCM2L-201ENST00000262659 IGFL3Q6UXB1 125 aa17.32■□□□□ 0.36
CCM2L-201ENST00000262659 Q9UF83 564 aa17.32■□□□□ 0.36
CCM2L-201ENST00000262659 FAM223BA6NKX1 122 aa17.3■□□□□ 0.36
CCM2L-201ENST00000262659 CHCHD7Q9BUK0 85 aa17.3■□□□□ 0.36
CCM2L-201ENST00000262659 BDP1A6H8Y1 2624 aa17.3■□□□□ 0.36
CCM2L-201ENST00000262659 K7ENP7 123 aa17.29■□□□□ 0.36
CCM2L-201ENST00000262659 FAM223AQ8IWN6 122 aa17.29■□□□□ 0.36
CCM2L-201ENST00000262659 BSNQ9UPA5 3926 aa17.29■□□□□ 0.36
CCM2L-201ENST00000262659 IGHV3-11P01762 117 aa17.29■□□□□ 0.36
CCM2L-201ENST00000262659 EDN2P20800 178 aa17.29■□□□□ 0.36
CCM2L-201ENST00000262659 COX6A2Q02221 97 aa17.29■□□□□ 0.36
CCM2L-201ENST00000262659 ZFP36P26651 326 aaKnown RBP17.28■□□□□ 0.36
CCM2L-201ENST00000262659 UCNP55089 124 aa17.27■□□□□ 0.36
CCM2L-201ENST00000262659 IGHV1OR15-1A0A075B7D0 117 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 HIST2H2BCQ6DN03 193 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 HIST2H2BDQ6DRA6 164 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 C5orf56Q8N8D9 126 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 LINC00467Q9BRT7 94 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 PTPRQQ9UMZ3 2332 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 PIK3CD-AS1Q5SR53 167 aa17.26■□□□□ 0.35
CCM2L-201ENST00000262659 ZNF415Q09FC8 603 aa17.25■□□□□ 0.35
CCM2L-201ENST00000262659 LINC01560Q8TB33 94 aa17.25■□□□□ 0.35
CCM2L-201ENST00000262659 IGLV5-45A0A087WSX0 123 aa17.25■□□□□ 0.35
CCM2L-201ENST00000262659 SAA4P35542 130 aa17.24■□□□□ 0.35
CCM2L-201ENST00000262659 COPS9Q8WXC6 57 aa17.24■□□□□ 0.35
CCM2L-201ENST00000262659 A0A087WYN8 130 aa17.24■□□□□ 0.35
CCM2L-201ENST00000262659 PFN2P35080 140 aa17.24■□□□□ 0.35
CCM2L-201ENST00000262659 IGLV5-39A0A0G2JS06 123 aa17.23■□□□□ 0.35
CCM2L-201ENST00000262659 HILS1P60008 231 aa17.23■□□□□ 0.35
CCM2L-201ENST00000262659 SIRPDQ9H106 197 aa17.23■□□□□ 0.35
CCM2L-201ENST00000262659 SPINK13Q1W4C9 94 aa17.22■□□□□ 0.35
CCM2L-201ENST00000262659 C19orf54Q5BKX5 351 aa17.22■□□□□ 0.35
CCM2L-201ENST00000262659 LINC00336Q6ZUF6 198 aa17.22■□□□□ 0.35
CCM2L-201ENST00000262659 EP300Q09472 2414 aaPredicted RBP17.22■□□□□ 0.35
CCM2L-201ENST00000262659 RPL28P46779 137 aaKnown RBP17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms