RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 COA6Q5JTJ3 125 aaKnown RBP10.8□□□□□ -0.68
CUX2-201ENST00000261726 IGFL2Q6UWQ7 119 aa10.8□□□□□ -0.68
CUX2-201ENST00000261726 MALRD1Q5VYJ5 2156 aa10.8□□□□□ -0.68
CUX2-201ENST00000261726 MRPL55Q7Z7F7 128 aaKnown RBP10.8□□□□□ -0.68
CUX2-201ENST00000261726 TMEM89A2RUT3 159 aa10.8□□□□□ -0.68
CUX2-201ENST00000261726 A6NDX4 124 aa10.8□□□□□ -0.68
CUX2-201ENST00000261726 HILS1P60008 231 aa10.8□□□□□ -0.68
CUX2-201ENST00000261726 KRTAP27-1Q3LI81 207 aa10.8□□□□□ -0.68
CUX2-201ENST00000261726 PPDPFQ9H3Y8 114 aa10.79□□□□□ -0.68
CUX2-201ENST00000261726 XAGE1AQ9HD64 81 aa10.79□□□□□ -0.68
CUX2-201ENST00000261726 C1orf158Q8N1D5 194 aa10.79□□□□□ -0.68
CUX2-201ENST00000261726 MED13Q9UHV7 2174 aa10.79□□□□□ -0.68
CUX2-201ENST00000261726 FAM236DA0A1B0GTK5 79 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 FAM236CP0DP71 79 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 PCNX2A6NKB5 2137 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 C3orf84H3BNL1 204 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 UBE2D1P51668 147 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 ZNF80P51504 273 aaPredicted RBP10.78□□□□□ -0.68
CUX2-201ENST00000261726 IGLC6P0CF74 106 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 DAZAP2Q15038 168 aaPredicted RBP10.78□□□□□ -0.68
CUX2-201ENST00000261726 PIK3CD-AS1Q5SR53 167 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 RETNQ9HD89 108 aa10.78□□□□□ -0.68
CUX2-201ENST00000261726 IGLV1-47P01700 117 aa10.77□□□□□ -0.68
CUX2-201ENST00000261726 NDUFV3P56181 108 aaKnown RBP10.77□□□□□ -0.68
CUX2-201ENST00000261726 PRR15LQ9BU68 103 aa10.77□□□□□ -0.68
CUX2-201ENST00000261726 LINC01548A6NM66 108 aa10.77□□□□□ -0.69
CUX2-201ENST00000261726 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.77□□□□□ -0.69
CUX2-201ENST00000261726 CCDC140Q96MF4 163 aa10.77□□□□□ -0.69
CUX2-201ENST00000261726 IGLV2-18A0A075B6J9 118 aa10.77□□□□□ -0.69
CUX2-201ENST00000261726 M0R2N4 97 aa10.77□□□□□ -0.69
CUX2-201ENST00000261726 IGHV4-30-4P0DP06 118 aa10.77□□□□□ -0.69
CUX2-201ENST00000261726 IGHV4-31P0DP07 118 aa10.77□□□□□ -0.69
CUX2-201ENST00000261726 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 UBE2D4Q9Y2X8 147 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 PCNX1Q96RV3 2341 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 LINC00482Q8N8I6 264 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 IGKV2-28A0A075B6P5 120 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 IGKV2D-28P01615 120 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 CEP350Q5VT06 3117 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 IGLV2-14P01704 120 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 C7orf33Q8WU49 177 aa10.76□□□□□ -0.69
CUX2-201ENST00000261726 MT-ATP8P03928 68 aa10.75□□□□□ -0.69
CUX2-201ENST00000261726 SPATA12Q7Z6I5 190 aa10.75□□□□□ -0.69
CUX2-201ENST00000261726 TNCP24821 2201 aa10.75□□□□□ -0.69
CUX2-201ENST00000261726 C19orf71A6NCJ1 209 aa10.75□□□□□ -0.69
CUX2-201ENST00000261726 CDKN2A-AS1Q9UH64 79 aa10.75□□□□□ -0.69
CUX2-201ENST00000261726 MUC22E2RYF6 1773 aaPredicted RBP10.74□□□□□ -0.69
CUX2-201ENST00000261726 DSCAML1Q8TD84 2053 aa10.74□□□□□ -0.69
CUX2-201ENST00000261726 SHANK1Q9Y566 2161 aa10.74□□□□□ -0.69
CUX2-201ENST00000261726 FAM240AA0A1B0GVK7 77 aa10.74□□□□□ -0.69
CUX2-201ENST00000261726 LYRM9A8MSI8 78 aa10.74□□□□□ -0.69
CUX2-201ENST00000261726 INAFM1C9JVW0 142 aa10.74□□□□□ -0.69
CUX2-201ENST00000261726 NDUFC2-KCTD14E9PQ53 114 aa10.73□□□□□ -0.69
CUX2-201ENST00000261726 CCKP06307 115 aa10.73□□□□□ -0.69
CUX2-201ENST00000261726 WFDC13Q8IUB5 93 aa10.73□□□□□ -0.69
CUX2-201ENST00000261726 NEXN-AS1Q8NBZ9 246 aa10.73□□□□□ -0.69
CUX2-201ENST00000261726 DENND4AQ7Z401 1863 aa10.73□□□□□ -0.69
CUX2-201ENST00000261726 CEP192Q8TEP8 1941 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 PRR4Q16378 134 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 C20orf173Q96LM9 149 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 ARHGAP21Q5T5U3 1957 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 NBASA2RRP1 2371 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 PLA2G5P39877 138 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 SNURFQ9Y675 71 aa10.72□□□□□ -0.69
CUX2-201ENST00000261726 IGF1P05019 195 aa10.71□□□□□ -0.69
CUX2-201ENST00000261726 LINC00322Q6ZN03 302 aaPredicted RBP10.71□□□□□ -0.69
CUX2-201ENST00000261726 UBE2D3P61077 147 aa10.71□□□□□ -0.69
CUX2-201ENST00000261726 C9orf85Q96MD7 179 aa10.71□□□□□ -0.69
CUX2-201ENST00000261726 BRCA2P51587 3418 aa10.71□□□□□ -0.69
CUX2-201ENST00000261726 RIF1Q5UIP0 2472 aaKnown RBP10.71□□□□□ -0.7
CUX2-201ENST00000261726 SERP1Q9Y6X1 66 aa10.71□□□□□ -0.7
CUX2-201ENST00000261726 TMEM223A0PJW6 202 aa10.7□□□□□ -0.7
CUX2-201ENST00000261726 LINC00526Q96FQ7 95 aa10.7□□□□□ -0.7
CUX2-201ENST00000261726 IGLV9-49A0A0B4J1Y8 123 aa10.7□□□□□ -0.7
CUX2-201ENST00000261726 PROK1P58294 105 aa10.7□□□□□ -0.7
CUX2-201ENST00000261726 UQCRQO14949 82 aa10.7□□□□□ -0.7
CUX2-201ENST00000261726 C6orf99Q4VX62 202 aa10.7□□□□□ -0.7
CUX2-201ENST00000261726 DEFB114Q30KQ6 69 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 LINC00308Q8TCZ7 52 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 SPANXB1Q9NS25 103 aaPredicted RBP10.69□□□□□ -0.7
CUX2-201ENST00000261726 A6NED7 52 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 SMIM9A6NGZ8 99 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 LY6LH3BQJ8 138 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 TNFRSF13BO14836 293 aaPredicted RBP10.69□□□□□ -0.7
CUX2-201ENST00000261726 SYCNQ0VAF6 134 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 IGLV4-3A0A075B6K6 122 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 WISP2O76076 250 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 MSMPQ1L6U9 139 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 Q8N976 141 aa10.69□□□□□ -0.7
CUX2-201ENST00000261726 ZFAND3Q9H8U3 227 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 TRIAP1O43715 76 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 TRBV6-8A0A0A6YYG3 113 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 RPL37AP8A6NKH3 93 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 H7C423 109 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 LY6G6CO95867 125 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 CFAP126Q5VTH2 177 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 Q6YL49 198 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 TP73-AS1Q9UF72 201 aa10.68□□□□□ -0.7
CUX2-201ENST00000261726 ZNF22P17026 224 aaPredicted RBP10.67□□□□□ -0.7
CUX2-201ENST00000261726 IGF2-ASQ6U949 168 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms