RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 H3BUA1 57 aa10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 DEFB136Q30KP8 78 aa10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 TRPT1Q86TN4 253 aaKnown RBP10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 SLC25A29Q8N8R3 303 aa10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 TIMM17AQ99595 171 aa10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 LINC01619G3V211 115 aa10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 APRG1Q8IVJ8 170 aa10.7□□□□□ -0.7
SFSWAP-201ENST00000261674 C9JAW5 83 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 C10orf126Q8N4M7 172 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 DUX3Q96PT4 197 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 CYSRT1A8MQ03 144 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 LYRM7Q5U5X0 104 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 MUSTN1Q8IVN3 82 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 Q9UF83 564 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 A8MWV9 139 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 SPINK8P0C7L1 97 aa10.69□□□□□ -0.7
SFSWAP-201ENST00000261674 NXPH4O95158 308 aa10.68□□□□□ -0.7
SFSWAP-201ENST00000261674 CD28P10747 220 aa10.68□□□□□ -0.7
SFSWAP-201ENST00000261674 LGALS9O00182 355 aa10.68□□□□□ -0.7
SFSWAP-201ENST00000261674 SPATA25Q9BR10 227 aa10.68□□□□□ -0.7
SFSWAP-201ENST00000261674 IGHV3-38A0A0C4DH36 116 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 A8MZ25 164 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 MT-ATP8P03928 68 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 CKS1BP61024 79 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 CIDEAO60543 219 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 DEFB131AP59861 70 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 C20orf203Q8NBC4 194 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 ERG28Q9UKR5 140 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 I3L3M4 83 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 K7EMT4 169 aa10.67□□□□□ -0.7
SFSWAP-201ENST00000261674 PSMB8P28062 276 aa10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 UBE2D3P61077 147 aa10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 UBE2D2P62837 147 aa10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 C9orf85Q96MD7 179 aa10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 A0A1B0GV72 72 aa10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 ZNF22P17026 224 aaPredicted RBP10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
SFSWAP-201ENST00000261674 K7EQG2 157 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 TCTEX1D4Q5JR98 221 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 CARD19Q96LW7 228 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 IGHV3OR16-12A0A075B7B8 117 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 A0A0U1RRA0 63 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 RHODO00212 210 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 HOXD3P31249 432 aaPredicted RBP10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 ANKRD29Q8N6D5 301 aa10.65□□□□□ -0.7
SFSWAP-201ENST00000261674 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.71
SFSWAP-201ENST00000261674 FHL3Q13643 280 aa10.64□□□□□ -0.71
SFSWAP-201ENST00000261674 TEN1Q86WV5 123 aa10.64□□□□□ -0.71
SFSWAP-201ENST00000261674 POM121L12Q8N7R1 296 aa10.64□□□□□ -0.71
SFSWAP-201ENST00000261674 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
SFSWAP-201ENST00000261674 TMEM223A0PJW6 202 aa10.64□□□□□ -0.71
SFSWAP-201ENST00000261674 C18orf65Q6ZTR6 163 aa10.64□□□□□ -0.71
SFSWAP-201ENST00000261674 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 SLC25A20O43772 301 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 SLURP1P55000 103 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 RPL32P62910 135 aaKnown RBP10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 AMELXQ99217 191 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 LEPROTO15243 131 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 XGP55808 180 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 TIMM21Q9BVV7 248 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 TRBV20-1A0A075B6N2 111 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 LRRC75A-AS1Q8N1F1 130 aa10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 NSD1Q96L73 2696 aaPredicted RBP10.63□□□□□ -0.71
SFSWAP-201ENST00000261674 RBMY1A1P0DJD3 496 aaKnown RBP10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 RBMY1CP0DJD4 496 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 IGHV3-30-3P0DP02 117 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 CFHR3Q02985 330 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 RBMY1FQ15415 496 aaKnown RBP10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 RHOHQ15669 191 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 DAND5Q8N907 189 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 IGHV3-33P01772 117 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 Q6ZSV7 163 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 ELANEP08246 267 aa10.62□□□□□ -0.71
SFSWAP-201ENST00000261674 INAFM1C9JVW0 142 aa10.61□□□□□ -0.71
SFSWAP-201ENST00000261674 TRGV11A0A075B6L2 103 aa10.61□□□□□ -0.71
SFSWAP-201ENST00000261674 A0A0J9YXY3 114 aa10.61□□□□□ -0.71
SFSWAP-201ENST00000261674 NSUN5P1Q3KNT7 163 aa10.61□□□□□ -0.71
SFSWAP-201ENST00000261674 ZNF625Q96I27 306 aaPredicted RBP10.61□□□□□ -0.71
SFSWAP-201ENST00000261674 LINC01587Q99440 93 aa10.61□□□□□ -0.71
SFSWAP-201ENST00000261674 EIF4EBP3O60516 100 aaPredicted RBP10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 LY6G6DO95868 133 aa10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 Q6ZUT4 128 aa10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 NTN5Q8WTR8 489 aaPredicted RBP10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 SCGB1A1P11684 91 aa10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 DGAT2L7PQ6IED9 249 aa10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 GEMIN7Q9H840 131 aaKnown RBP10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 NDUFA12Q9UI09 145 aa10.6□□□□□ -0.71
SFSWAP-201ENST00000261674 Q6ZSN1 163 aa10.59□□□□□ -0.71
SFSWAP-201ENST00000261674 BRI3O95415 125 aa10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 A0A1W2PRX2 142 aa10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 CRYBA4P53673 196 aa10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 ATP6V0E2Q8NHE4 81 aa10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 TMEM263Q8WUH6 116 aaKnown RBP10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 GATA3P23771 443 aa10.58□□□□□ -0.72
SFSWAP-201ENST00000261674 KRTAP1-1Q07627 177 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms