RNA–Protein interactions for RNA: ENST00000257904.10

CDK4-201, Transcript of cyclin dependent kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK4, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-201ENST00000257904 TRBV30A0A0K0K1B3 111 aa12.42□□□□□ -0.42
CDK4-201ENST00000257904 TRAV8-3A0A0A6YYJ7 113 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 PROK1P58294 105 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 KRTAP10-9P60411 292 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 CEMP1Q6PRD7 247 aaPredicted RBP12.41□□□□□ -0.42
CDK4-201ENST00000257904 LINC01600Q96MT4 127 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 IGHV1-58A0A0C4DH39 117 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 TRIAP1O43715 76 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 CLUHP3Q96NS8 147 aa12.41□□□□□ -0.42
CDK4-201ENST00000257904 PTPN13Q12923 2485 aa12.4□□□□□ -0.42
CDK4-201ENST00000257904 DEFB112Q30KQ8 113 aa12.4□□□□□ -0.42
CDK4-201ENST00000257904 NTN5Q8WTR8 489 aaPredicted RBP12.4□□□□□ -0.42
CDK4-201ENST00000257904 ANKRD17O75179 2603 aaKnown RBP12.39□□□□□ -0.43
CDK4-201ENST00000257904 MAPK1IP1LQ8NDC0 245 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 DUX5Q96PT3 197 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 CITED1Q99966 193 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 SPANXDQ9BXN6 97 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 BEX4Q9NWD9 120 aaPredicted RBP12.39□□□□□ -0.43
CDK4-201ENST00000257904 SPANXCQ9NY87 97 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 CSMD2Q7Z408 3487 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 POLQO75417 2590 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 HTN1P15515 57 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 GATA3P23771 443 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 RNASE13Q5GAN3 156 aaKnown RBP12.39□□□□□ -0.43
CDK4-201ENST00000257904 ADAMTSL4-AS1Q5T5F5 129 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 LINC01356Q8N9X3 169 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 NDUFA12Q9UI09 145 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 TNFRSF18Q9Y5U5 241 aa12.39□□□□□ -0.43
CDK4-201ENST00000257904 TRBV10-2A0A0K0K1G8 114 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 PRSS2P07478 247 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 ZFAND6Q6FIF0 208 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 DOPEY2Q9Y3R5 2298 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 TINCRA0A1B0GVN0 87 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 PLA2G2AP14555 144 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 HOXD3P31249 432 aaPredicted RBP12.38□□□□□ -0.43
CDK4-201ENST00000257904 RPL13AP40429 203 aaKnown RBP12.38□□□□□ -0.43
CDK4-201ENST00000257904 VSIG2Q96IQ7 327 aa12.38□□□□□ -0.43
CDK4-201ENST00000257904 A0A096LNT2 108 aa12.37□□□□□ -0.43
CDK4-201ENST00000257904 KNCNA6PVL3 124 aa12.37□□□□□ -0.43
CDK4-201ENST00000257904 TEX29Q8N6K0 151 aa12.37□□□□□ -0.43
CDK4-201ENST00000257904 MIAQ16674 131 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 RNF183Q96D59 192 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 CHCHD7Q9BUK0 85 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 SPANXA1Q9NS26 97 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 UBE2D4Q9Y2X8 147 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 ICOSQ9Y6W8 199 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 TENM4Q6N022 2769 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 Q9UF83 564 aa12.36□□□□□ -0.43
CDK4-201ENST00000257904 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.35□□□□□ -0.431e-8■■■■■ 44.3
CDK4-201ENST00000257904 TEX49A0A1B0GTD5 131 aa12.35□□□□□ -0.43
CDK4-201ENST00000257904 J3QKU1 62 aa12.35□□□□□ -0.43
CDK4-201ENST00000257904 ANAPC13Q9BS18 74 aa12.35□□□□□ -0.43
CDK4-201ENST00000257904 ABCA12Q86UK0 2595 aa12.35□□□□□ -0.43
CDK4-201ENST00000257904 A8MZ25 164 aa12.34□□□□□ -0.43
CDK4-201ENST00000257904 DEFB113Q30KQ7 82 aa12.34□□□□□ -0.43
CDK4-201ENST00000257904 Q5PR19 223 aa12.34□□□□□ -0.43
CDK4-201ENST00000257904 Q6ZSN1 163 aa12.34□□□□□ -0.43
CDK4-201ENST00000257904 DUX3Q96PT4 197 aa12.34□□□□□ -0.43
CDK4-201ENST00000257904 PRRC2AP48634 2157 aaKnown RBP12.33□□□□□ -0.44
CDK4-201ENST00000257904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.33□□□□□ -0.44
CDK4-201ENST00000257904 IGKV2-29A2NJV5 120 aaPredicted RBP12.33□□□□□ -0.44
CDK4-201ENST00000257904 A8MTW9 85 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 PRM2P04554 102 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 DEFB131AP59861 70 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 PIK3CD-AS1Q5SR53 167 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 RBMY1BA6NDE4 496 aaKnown RBP12.33□□□□□ -0.44
CDK4-201ENST00000257904 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
CDK4-201ENST00000257904 H3BMM0 161 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 SNCGO76070 127 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
CDK4-201ENST00000257904 LRRC75A-AS1Q8N1F1 130 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 UBE2WQ96B02 151 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 UBE2E2Q96LR5 201 aa12.33□□□□□ -0.44
CDK4-201ENST00000257904 NAV2Q8IVL1 2488 aa12.32□□□□□ -0.44
CDK4-201ENST00000257904 NPC2P61916 151 aa12.32□□□□□ -0.44
CDK4-201ENST00000257904 ZNF415Q09FC8 603 aa12.32□□□□□ -0.44
CDK4-201ENST00000257904 LINC00467Q9BRT7 94 aa12.32□□□□□ -0.44
CDK4-201ENST00000257904 TRAV8-4A0A0B4J246 113 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 H7C423 109 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 J3QLI3 93 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 COX6CP09669 75 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 C2orf82Q6UX34 121 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 Q6ZSV7 163 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 TMEM61Q8N0U2 210 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 YAE1D1Q9NRH1 226 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 TRAV4A0A0B4J268 109 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 SORL1Q92673 2214 aa12.31□□□□□ -0.44
CDK4-201ENST00000257904 TIMM17BO60830 172 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 CRLF1O75462 422 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 GAGE2BQ13066 116 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 GAGE2EQ4V326 116 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 GAGE2DQ9UEU5 116 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 APCP25054 2843 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 CSPG4Q6UVK1 2322 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 H3BT86 120 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 VPREB3Q9UKI3 123 aa12.3□□□□□ -0.44
CDK4-201ENST00000257904 ZNF702PQ9H963 129 aa12.29□□□□□ -0.44
CDK4-201ENST00000257904 NBPF19A0A087WUL8 3843 aa12.29□□□□□ -0.44
CDK4-201ENST00000257904 IGHV3-38A0A0C4DH36 116 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms