RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 A0A087WWL8 130 aa15.15■□□□□ 0.02
RARA-201ENST00000254066 FAM223BA6NKX1 122 aa15.15■□□□□ 0.02
RARA-201ENST00000254066 GNLYP22749 145 aa15.15■□□□□ 0.02
RARA-201ENST00000254066 FAM223AQ8IWN6 122 aa15.15■□□□□ 0.02
RARA-201ENST00000254066 MUC4Q99102 2169 aa15.14■□□□□ 0.01
RARA-201ENST00000254066 ADAMTSL4-AS1Q5T5F5 129 aa15.14■□□□□ 0.01
RARA-201ENST00000254066 NDUFA12Q9UI09 145 aa15.14■□□□□ 0.01
RARA-201ENST00000254066 V9GYY9 64 aa15.14■□□□□ 0.01
RARA-201ENST00000254066 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.13■□□□□ 0.01
RARA-201ENST00000254066 NDUFA4O00483 81 aa15.13■□□□□ 0.01
RARA-201ENST00000254066 EDN2P20800 178 aa15.13■□□□□ 0.01
RARA-201ENST00000254066 ARHGAP32A7KAX9 2087 aa15.13■□□□□ 0.01
RARA-201ENST00000254066 DEFB104AQ8WTQ1 72 aa15.13■□□□□ 0.01
RARA-201ENST00000254066 G3V318 75 aa15.12■□□□□ 0.01
RARA-201ENST00000254066 C5orf38Q86SI9 138 aa15.12■□□□□ 0.01
RARA-201ENST00000254066 C9orf85Q96MD7 179 aa15.12■□□□□ 0.01
RARA-201ENST00000254066 FLNBO75369 2602 aaKnown RBP15.12■□□□□ 0.01
RARA-201ENST00000254066 TRAV8-3A0A0A6YYJ7 113 aa15.12■□□□□ 0.01
RARA-201ENST00000254066 ZNF580Q9UK33 172 aa15.12■□□□□ 0.01
RARA-201ENST00000254066 COX7CP15954 63 aa15.11■□□□□ 0.01
RARA-201ENST00000254066 PEMTQ9UBM1 199 aa15.11■□□□□ 0.01
RARA-201ENST00000254066 CEMP1Q6PRD7 247 aaPredicted RBP15.11■□□□□ 0.01
RARA-201ENST00000254066 HRCT1Q6UXD1 115 aa15.11■□□□□ 0.01
RARA-201ENST00000254066 C4orf26Q17RF5 130 aa15.1■□□□□ 0.01
RARA-201ENST00000254066 VSIG2Q96IQ7 327 aa15.1■□□□□ 0.01
RARA-201ENST00000254066 CRYGAP11844 174 aa15.09■□□□□ 0.01
RARA-201ENST00000254066 LINC00527Q9UJ94 153 aa15.09■□□□□ 0.01
RARA-201ENST00000254066 NBASA2RRP1 2371 aa15.09■□□□□ 0.01
RARA-201ENST00000254066 RPL11P62913 178 aaKnown RBP15.08■□□□□ 0.01
RARA-201ENST00000254066 C1orf43Q9BWL3 253 aa15.08■□□□□ 0.01
RARA-201ENST00000254066 ADARB2-AS1A8MUL3 147 aa15.08■□□□□ 0
RARA-201ENST00000254066 F6UB75 175 aa15.07■□□□□ 0
RARA-201ENST00000254066 COX7A2LO14548 114 aa15.07■□□□□ 0
RARA-201ENST00000254066 FAM74A4Q5TZK3 123 aa15.07■□□□□ 0
RARA-201ENST00000254066 SMCR5Q8TEV8 140 aa15.07■□□□□ 0
RARA-201ENST00000254066 DEFB1P60022 68 aa15.07■□□□□ 0
RARA-201ENST00000254066 ZNF415Q09FC8 603 aa15.07■□□□□ 0
RARA-201ENST00000254066 DAND5Q8N907 189 aa15.07■□□□□ 0
RARA-201ENST00000254066 PKDREJQ9NTG1 2253 aa15.07■□□□□ 0
RARA-201ENST00000254066 ROS1P08922 2347 aa15.07■□□□□ 0
RARA-201ENST00000254066 IGHV3-16A0A0C4DH30 117 aa15.06■□□□□ 0
RARA-201ENST00000254066 CD28P10747 220 aa15.06■□□□□ 0
RARA-201ENST00000254066 Q5XG85 94 aa15.06■□□□□ 0
RARA-201ENST00000254066 C19orf54Q5BKX5 351 aa15.06■□□□□ 0
RARA-201ENST00000254066 GAGE2AQ6NT46 116 aa15.06■□□□□ 0
RARA-201ENST00000254066 SIRPDQ9H106 197 aa15.06■□□□□ 0
RARA-201ENST00000254066 UNQ9165/PRO28630Q6UXU0 137 aa15.05■□□□□ 0
RARA-201ENST00000254066 SETXQ7Z333 2677 aaKnown RBP15.05■□□□□ -0
RARA-201ENST00000254066 TRACP01848 142 aa15.05■□□□□ -0
RARA-201ENST00000254066 Q6ZSV7 163 aa15.05■□□□□ -0
RARA-201ENST00000254066 ATOX1O00244 68 aa15.04■□□□□ -0
RARA-201ENST00000254066 HIST1H4AP62805 103 aaKnown RBP15.04■□□□□ -0
RARA-201ENST00000254066 FAM222AQ5U5X8 452 aa15.04■□□□□ -0
RARA-201ENST00000254066 COPS9Q8WXC6 57 aa15.04■□□□□ -0
RARA-201ENST00000254066 DOPEY2Q9Y3R5 2298 aa15.04■□□□□ -0
RARA-201ENST00000254066 PTPN13Q12923 2485 aa15.03■□□□□ -0
RARA-201ENST00000254066 TRAV41A0A0B4J266 112 aa15.03■□□□□ -0
RARA-201ENST00000254066 C5orf56Q8N8D9 126 aa15.03■□□□□ -0
RARA-201ENST00000254066 C2orf48Q96LS8 159 aa15.03■□□□□ -0
RARA-201ENST00000254066 FAM104AQ969W3 186 aa15.03■□□□□ -0
RARA-201ENST00000254066 FLNCQ14315 2725 aa15.02■□□□□ -0
RARA-201ENST00000254066 INAFM2P0DMQ5 153 aa15.02■□□□□ -0
RARA-201ENST00000254066 CIRBPQ14011 172 aaKnown RBP15.02■□□□□ -0
RARA-201ENST00000254066 DPH3Q96FX2 82 aa15.02■□□□□ -0
RARA-201ENST00000254066 KLK5Q9Y337 293 aaPredicted RBP15.02□□□□□ -0.01
RARA-201ENST00000254066 SPENQ96T58 3664 aaKnown RBP15.01□□□□□ -0.01
RARA-201ENST00000254066 NDUFA1O15239 70 aa15.01□□□□□ -0.01
RARA-201ENST00000254066 LRRK2Q5S007 2527 aa15□□□□□ -0.01
RARA-201ENST00000254066 HECTD1Q9ULT8 2610 aa15□□□□□ -0.01
RARA-201ENST00000254066 TRAV12-3A0A0B4J271 114 aa15□□□□□ -0.01
RARA-201ENST00000254066 RPL35AP18077 110 aaKnown RBP15□□□□□ -0.01
RARA-201ENST00000254066 TMEM258P61165 79 aa15□□□□□ -0.01
RARA-201ENST00000254066 RP1L1Q8IWN7 2480 aaPredicted RBP15□□□□□ -0.01
RARA-201ENST00000254066 DAZ2Q13117 558 aaKnown RBP15□□□□□ -0.01
RARA-201ENST00000254066 DAZ4Q86SG3 579 aaKnown RBP15□□□□□ -0.01
RARA-201ENST00000254066 DAZ1Q9NQZ3 744 aaKnown RBP15□□□□□ -0.01
RARA-201ENST00000254066 DAZ3Q9NR90 486 aaKnown RBP15□□□□□ -0.01
RARA-201ENST00000254066 PRRC2AP48634 2157 aaKnown RBP14.99□□□□□ -0.01
RARA-201ENST00000254066 NPC2P61916 151 aa14.98□□□□□ -0.01
RARA-201ENST00000254066 BEAN1Q3B7T3 259 aa14.98□□□□□ -0.01
RARA-201ENST00000254066 USMG5Q96IX5 58 aa14.98□□□□□ -0.01
RARA-201ENST00000254066 WNK2Q9Y3S1 2297 aa14.98□□□□□ -0.01
RARA-201ENST00000254066 H3BUA1 57 aa14.97□□□□□ -0.01
RARA-201ENST00000254066 RHPN1-AS1Q9BWJ2 59 aa14.97□□□□□ -0.01
RARA-201ENST00000254066 LY6HO94772 140 aa14.97□□□□□ -0.01
RARA-201ENST00000254066 USP9XQ93008 2570 aaPredicted RBP14.96□□□□□ -0.01
RARA-201ENST00000254066 TMEM86BQ8N661 226 aa14.96□□□□□ -0.01
RARA-201ENST00000254066 BAALC-AS2P0C853 105 aa14.96□□□□□ -0.01
RARA-201ENST00000254066 SAA4P35542 130 aa14.96□□□□□ -0.01
RARA-201ENST00000254066 LINC00308Q8TCZ7 52 aa14.96□□□□□ -0.01
RARA-201ENST00000254066 ZFP36P26651 326 aaKnown RBP14.95□□□□□ -0.02
RARA-201ENST00000254066 MOB4Q9Y3A3 225 aa14.95□□□□□ -0.02
RARA-201ENST00000254066 POLEQ07864 2286 aa14.95□□□□□ -0.02
RARA-201ENST00000254066 RELNP78509 3460 aa14.95□□□□□ -0.02
RARA-201ENST00000254066 HIVEP3Q5T1R4 2406 aa14.95□□□□□ -0.02
RARA-201ENST00000254066 USP9YO00507 2555 aaPredicted RBP14.95□□□□□ -0.02
RARA-201ENST00000254066 TIRAPP58753 221 aa14.95□□□□□ -0.02
RARA-201ENST00000254066 IGHV1OR15-1A0A075B7D0 117 aa14.94□□□□□ -0.02
RARA-201ENST00000254066 TRBV12-3P01733 135 aa14.94□□□□□ -0.02
RARA-201ENST00000254066 LINC01560Q8TB33 94 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms