RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 SERF1AO75920 110 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 GYPEP15421 78 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 NANOS2P60321 138 aaKnown RBP9.05□□□□□ -0.96
LSM8-201ENST00000249299 LAGE3Q14657 143 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 URB1-AS1Q96HZ7 61 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 VSIG2Q96IQ7 327 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 TMA7Q9Y2S6 64 aaKnown RBP9.05□□□□□ -0.96
LSM8-201ENST00000249299 TIRAPP58753 221 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 LINC00310P59036 64 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 COTL1Q14019 142 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 Q8N3U1 123 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 ICOSQ9Y6W8 199 aa9.05□□□□□ -0.96
LSM8-201ENST00000249299 FBN3Q75N90 2809 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 GAGE12JA6NER3 117 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 HTN3P15516 51 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 FCER1GP30273 86 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 GAGE1Q13065 139 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 GAGE4Q13068 117 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 GAGE5Q13069 117 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 GAGE13Q4V321 117 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 RNASEKQ6P5S7 137 aaKnown RBP9.04□□□□□ -0.96
LSM8-201ENST00000249299 C15orf53Q8NAA6 179 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 Q9UF83 564 aa9.04□□□□□ -0.96
LSM8-201ENST00000249299 KRTAP9-6A0A140TA67 174 aa9.03□□□□□ -0.96
LSM8-201ENST00000249299 SNRPEP62304 92 aaKnown RBP9.03□□□□□ -0.96
LSM8-201ENST00000249299 ATP6V0E2Q8NHE4 81 aa9.03□□□□□ -0.96
LSM8-201ENST00000249299 TMEM18Q96B42 140 aa9.03□□□□□ -0.96
LSM8-201ENST00000249299 COL7A1Q02388 2944 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 H7C423 109 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 TSHBP01222 138 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 HBDP02042 147 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 NPSP0C0P6 89 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 S100A2P29034 98 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 SMAGPQ0VAQ4 97 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 NEGR1Q7Z3B1 354 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 HIST3H2BBQ8N257 126 aa9.02□□□□□ -0.97
LSM8-201ENST00000249299 PHLDA1Q8WV24 401 aaPredicted RBP9.02□□□□□ -0.97
LSM8-201ENST00000249299 PRKDCP78527 4128 aaKnown RBP9.02□□□□□ -0.97
LSM8-201ENST00000249299 LOC100131303A0A0U1RQF7 123 aa9.01□□□□□ -0.97
LSM8-201ENST00000249299 NUPR1O60356 82 aa9.01□□□□□ -0.97
LSM8-201ENST00000249299 TCTAP57738 103 aa9.01□□□□□ -0.97
LSM8-201ENST00000249299 A0A096LPF7 62 aa9□□□□□ -0.97
LSM8-201ENST00000249299 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
LSM8-201ENST00000249299 A0A0J9YY99 117 aa9□□□□□ -0.97
LSM8-201ENST00000249299 NUDT3O95989 172 aa9□□□□□ -0.97
LSM8-201ENST00000249299 AMTP48728 403 aa9□□□□□ -0.97
LSM8-201ENST00000249299 C20orf203Q8NBC4 194 aa9□□□□□ -0.97
LSM8-201ENST00000249299 CYSLTR1Q9Y271 337 aa9□□□□□ -0.97
LSM8-201ENST00000249299 TRBV25-1A0A075B6N4 114 aa8.99□□□□□ -0.97
LSM8-201ENST00000249299 IGHV1-24A0A0C4DH33 117 aa8.99□□□□□ -0.97
LSM8-201ENST00000249299 PKIAP61925 76 aa8.99□□□□□ -0.97
LSM8-201ENST00000249299 TOMM6Q96B49 74 aa8.99□□□□□ -0.97
LSM8-201ENST00000249299 TIMM21Q9BVV7 248 aa8.99□□□□□ -0.97
LSM8-201ENST00000249299 HSPB8Q9UJY1 196 aa8.99□□□□□ -0.97
LSM8-201ENST00000249299 A0A096LNJ9 63 aa8.98□□□□□ -0.97
LSM8-201ENST00000249299 NUPR2A6NF83 97 aa8.98□□□□□ -0.97
LSM8-201ENST00000249299 PDZD11Q5EBL8 140 aa8.98□□□□□ -0.97
LSM8-201ENST00000249299 PYGO1Q9Y3Y4 419 aa8.98□□□□□ -0.97
LSM8-201ENST00000249299 CSDC2Q9Y534 153 aaKnown RBP8.98□□□□□ -0.97
LSM8-201ENST00000249299 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 ATP5LO75964 103 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 LEPROTL1O95214 131 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 BTF3P20290 206 aaKnown RBP8.97□□□□□ -0.97
LSM8-201ENST00000249299 LELP1Q5T871 98 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
LSM8-201ENST00000249299 C2orf66Q6UXQ4 117 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 ERASQ7Z444 233 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 TIMM17AQ99595 171 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 HIST1H2BLQ99880 126 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 CHCHD7Q9BUK0 85 aa8.97□□□□□ -0.97
LSM8-201ENST00000249299 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
LSM8-201ENST00000249299 PAPPA-AS1Q5QFB9 102 aa8.96□□□□□ -0.98
LSM8-201ENST00000249299 MRPL52Q86TS9 123 aaKnown RBP8.96□□□□□ -0.98
LSM8-201ENST00000249299 FAM19A2Q8N3H0 131 aa8.96□□□□□ -0.98
LSM8-201ENST00000249299 TMEM141Q96I45 108 aa8.96□□□□□ -0.98
LSM8-201ENST00000249299 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.98
LSM8-201ENST00000249299 ZNF25P17030 456 aaPredicted RBP8.95□□□□□ -0.98
LSM8-201ENST00000249299 IGIPA6NJ69 53 aa8.94□□□□□ -0.98
LSM8-201ENST00000249299 IFITM10A6NMD0 228 aa8.94□□□□□ -0.98
LSM8-201ENST00000249299 LYPD5Q6UWN5 251 aa8.94□□□□□ -0.98
LSM8-201ENST00000249299 SCGB3A1Q96QR1 104 aa8.94□□□□□ -0.98
LSM8-201ENST00000249299 A0A1B0GUV1 79 aa8.93□□□□□ -0.98
LSM8-201ENST00000249299 IGLL5B9A064 214 aa8.93□□□□□ -0.98
LSM8-201ENST00000249299 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.93□□□□□ -0.98
LSM8-201ENST00000249299 UBE2L6O14933 153 aa8.93□□□□□ -0.98
LSM8-201ENST00000249299 FABP4P15090 132 aa8.93□□□□□ -0.98
LSM8-201ENST00000249299 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
LSM8-201ENST00000249299 PMCHL1Q16048 86 aa8.93□□□□□ -0.98
LSM8-201ENST00000249299 SPATA12Q7Z6I5 190 aa8.93□□□□□ -0.98
LSM8-201ENST00000249299 TRAV8-6A0A0B4J262 113 aa8.92□□□□□ -0.98
LSM8-201ENST00000249299 AKR1D1P51857 326 aa8.92□□□□□ -0.98
LSM8-201ENST00000249299 IFI27L1Q96BM0 104 aa8.92□□□□□ -0.98
LSM8-201ENST00000249299 WWC2-AS2Q96NR7 200 aa8.92□□□□□ -0.98
LSM8-201ENST00000249299 MAP1LC3CQ9BXW4 147 aa8.92□□□□□ -0.98
LSM8-201ENST00000249299 UBE2D4Q9Y2X8 147 aa8.92□□□□□ -0.98
LSM8-201ENST00000249299 FGF6P10767 208 aa8.91□□□□□ -0.98
LSM8-201ENST00000249299 CCL18P55774 89 aa8.91□□□□□ -0.98
LSM8-201ENST00000249299 CHCHD5Q9BSY4 110 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms