RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 Q96MF0 132 aa18.65■□□□□ 0.58
RAB40C-201ENST00000248139 ZNF418Q8TF45 676 aaPredicted RBP18.64■□□□□ 0.57
RAB40C-201ENST00000248139 RHODO00212 210 aa18.64■□□□□ 0.57
RAB40C-201ENST00000248139 SMCPP49901 116 aaPredicted RBP18.63■□□□□ 0.57
RAB40C-201ENST00000248139 GTSF1LQ9H1H1 148 aa18.63■□□□□ 0.57
RAB40C-201ENST00000248139 RNF152Q8N8N0 203 aa18.63■□□□□ 0.57
RAB40C-201ENST00000248139 TRAV2A0A0B4J234 112 aa18.62■□□□□ 0.57
RAB40C-201ENST00000248139 PTH2Q96A98 100 aa18.62■□□□□ 0.57
RAB40C-201ENST00000248139 FLNAP21333 2647 aaKnown RBP18.62■□□□□ 0.57
RAB40C-201ENST00000248139 TRAV8-3A0A0A6YYJ7 113 aa18.62■□□□□ 0.57
RAB40C-201ENST00000248139 LINC01587Q99440 93 aa18.62■□□□□ 0.57
RAB40C-201ENST00000248139 TNFRSF18Q9Y5U5 241 aa18.62■□□□□ 0.57
RAB40C-201ENST00000248139 H7C2G1 150 aa18.61■□□□□ 0.57
RAB40C-201ENST00000248139 RAX2Q96IS3 184 aa18.61■□□□□ 0.57
RAB40C-201ENST00000248139 MAP6D1Q9H9H5 199 aa18.61■□□□□ 0.57
RAB40C-201ENST00000248139 ACANP16112 2415 aa18.61■□□□□ 0.57
RAB40C-201ENST00000248139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-201ENST00000248139 IGKV2-29A2NJV5 120 aaPredicted RBP18.61■□□□□ 0.57
RAB40C-201ENST00000248139 A8MZ25 164 aa18.61■□□□□ 0.57
RAB40C-201ENST00000248139 DYNLRB2Q8TF09 96 aa18.61■□□□□ 0.57
RAB40C-201ENST00000248139 IGHV3OR16-12A0A075B7B8 117 aa18.6■□□□□ 0.57
RAB40C-201ENST00000248139 A0A1W2PRX2 142 aa18.6■□□□□ 0.57
RAB40C-201ENST00000248139 EIF4EBP3O60516 100 aaPredicted RBP18.6■□□□□ 0.57
RAB40C-201ENST00000248139 A4D1N5 150 aa18.59■□□□□ 0.57
RAB40C-201ENST00000248139 C10orf126Q8N4M7 172 aa18.59■□□□□ 0.57
RAB40C-201ENST00000248139 LEPROTO15243 131 aa18.58■□□□□ 0.57
RAB40C-201ENST00000248139 DEFB113Q30KQ7 82 aa18.58■□□□□ 0.57
RAB40C-201ENST00000248139 XCL2Q9UBD3 114 aa18.58■□□□□ 0.57
RAB40C-201ENST00000248139 M0R2P5 195 aa18.58■□□□□ 0.56
RAB40C-201ENST00000248139 CFAP126Q5VTH2 177 aa18.57■□□□□ 0.56
RAB40C-201ENST00000248139 MTORP42345 2549 aa18.57■□□□□ 0.56
RAB40C-201ENST00000248139 TCL1BO95988 128 aa18.57■□□□□ 0.56
RAB40C-201ENST00000248139 AZU1P20160 251 aa18.57■□□□□ 0.56
RAB40C-201ENST00000248139 MUSTN1Q8IVN3 82 aa18.57■□□□□ 0.56
RAB40C-201ENST00000248139 UBE2D3P61077 147 aa18.56■□□□□ 0.56
RAB40C-201ENST00000248139 UBE2D2P62837 147 aa18.56■□□□□ 0.56
RAB40C-201ENST00000248139 ZNF843Q8N446 348 aa18.55■□□□□ 0.56
RAB40C-201ENST00000248139 IGHV3-30-3P0DP02 117 aa18.55■□□□□ 0.56
RAB40C-201ENST00000248139 DEFB114Q30KQ6 69 aa18.55■□□□□ 0.56
RAB40C-201ENST00000248139 PEMTQ9UBM1 199 aa18.55■□□□□ 0.56
RAB40C-201ENST00000248139 SETXQ7Z333 2677 aaKnown RBP18.54■□□□□ 0.56
RAB40C-201ENST00000248139 SMAGPQ0VAQ4 97 aa18.54■□□□□ 0.56
RAB40C-201ENST00000248139 GAGE12HA6NDE8 117 aa18.54■□□□□ 0.56
RAB40C-201ENST00000248139 ZNF415Q09FC8 603 aa18.54■□□□□ 0.56
RAB40C-201ENST00000248139 SCGB1C2P0DMR2 95 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 C4orf3Q8WVX3 66 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 PRO1854Q9UHT4 67 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 A8MWV9 139 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 C11orf72Q8NBR9 251 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 LINC00467Q9BRT7 94 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 CHCHD7Q9BUK0 85 aa18.53■□□□□ 0.56
RAB40C-201ENST00000248139 NPC2P61916 151 aa18.52■□□□□ 0.56
RAB40C-201ENST00000248139 HIST2H2BCQ6DN03 193 aa18.52■□□□□ 0.55
RAB40C-201ENST00000248139 Q8N2B8 174 aa18.51■□□□□ 0.55
RAB40C-201ENST00000248139 A0A0J9YXY3 114 aa18.51■□□□□ 0.55
RAB40C-201ENST00000248139 A8MTW9 85 aa18.51■□□□□ 0.55
RAB40C-201ENST00000248139 Q6ZUT4 128 aa18.51■□□□□ 0.55
RAB40C-201ENST00000248139 TIMM21Q9BVV7 248 aa18.51■□□□□ 0.55
RAB40C-201ENST00000248139 TMEM238C9JI98 176 aa18.5■□□□□ 0.55
RAB40C-201ENST00000248139 SPINK8P0C7L1 97 aa18.5■□□□□ 0.55
RAB40C-201ENST00000248139 Q6ZSV7 163 aa18.5■□□□□ 0.55
RAB40C-201ENST00000248139 PRSS2P07478 247 aa18.49■□□□□ 0.55
RAB40C-201ENST00000248139 UBE2D4Q9Y2X8 147 aa18.49■□□□□ 0.55
RAB40C-201ENST00000248139 ODF3L2Q3SX64 289 aa18.48■□□□□ 0.55
RAB40C-201ENST00000248139 KRTAP1-3Q8IUG1 177 aa18.48■□□□□ 0.55
RAB40C-201ENST00000248139 J3QR89 54 aa18.48■□□□□ 0.55
RAB40C-201ENST00000248139 MRPS36P82909 103 aaKnown RBP18.48■□□□□ 0.55
RAB40C-201ENST00000248139 PYGO1Q9Y3Y4 419 aa18.48■□□□□ 0.55
RAB40C-201ENST00000248139 IGHV3-53P01767 116 aa18.47■□□□□ 0.55
RAB40C-201ENST00000248139 FOXI1Q12951 378 aa18.47■□□□□ 0.55
RAB40C-201ENST00000248139 ADAMTSL4-AS1Q5T5F5 129 aa18.47■□□□□ 0.55
RAB40C-201ENST00000248139 WFDC11Q8NEX6 87 aa18.47■□□□□ 0.55
RAB40C-201ENST00000248139 SIGMAR1Q99720 223 aa18.47■□□□□ 0.55
RAB40C-201ENST00000248139 TENM4Q6N022 2769 aa18.46■□□□□ 0.55
RAB40C-201ENST00000248139 INSP01308 110 aa18.46■□□□□ 0.54
RAB40C-201ENST00000248139 TMEM263Q8WUH6 116 aaKnown RBP18.46■□□□□ 0.54
RAB40C-201ENST00000248139 IGHV3-33P01772 117 aa18.45■□□□□ 0.54
RAB40C-201ENST00000248139 C1QTNF4Q9BXJ3 329 aa18.45■□□□□ 0.54
RAB40C-201ENST00000248139 EDA2RQ9HAV5 297 aa18.44■□□□□ 0.54
RAB40C-201ENST00000248139 TRGV1A0A0A0MS02 117 aa18.43■□□□□ 0.54
RAB40C-201ENST00000248139 NDUFA7O95182 113 aa18.43■□□□□ 0.54
RAB40C-201ENST00000248139 Q1RN00 199 aa18.43■□□□□ 0.54
RAB40C-201ENST00000248139 C1orf158Q8N1D5 194 aa18.43■□□□□ 0.54
RAB40C-201ENST00000248139 LITAFQ99732 161 aa18.43■□□□□ 0.54
RAB40C-201ENST00000248139 NDUFA12Q9UI09 145 aa18.43■□□□□ 0.54
RAB40C-201ENST00000248139 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.42■□□□□ 0.54
RAB40C-201ENST00000248139 DAND5Q8N907 189 aa18.42■□□□□ 0.54
RAB40C-201ENST00000248139 CARD19Q96LW7 228 aa18.42■□□□□ 0.54
RAB40C-201ENST00000248139 ESM1Q9NQ30 184 aa18.42■□□□□ 0.54
RAB40C-201ENST00000248139 IGHV1-58A0A0C4DH39 117 aa18.41■□□□□ 0.54
RAB40C-201ENST00000248139 DNAJC9-AS1A6NH13 148 aa18.41■□□□□ 0.54
RAB40C-201ENST00000248139 FHL3Q13643 280 aa18.41■□□□□ 0.54
RAB40C-201ENST00000248139 STHQ8IWL8 128 aa18.41■□□□□ 0.54
RAB40C-201ENST00000248139 ERG28Q9UKR5 140 aa18.41■□□□□ 0.54
RAB40C-201ENST00000248139 CDKN2A-AS1Q9UH64 79 aa18.4■□□□□ 0.54
RAB40C-201ENST00000248139 SPATA25Q9BR10 227 aa18.39■□□□□ 0.54
RAB40C-201ENST00000248139 VSIG2Q96IQ7 327 aa18.39■□□□□ 0.53
RAB40C-201ENST00000248139 WFDC10AQ9H1F0 79 aa18.39■□□□□ 0.53
RAB40C-201ENST00000248139 ITPR2Q14571 2701 aa18.39■□□□□ 0.53
RAB40C-201ENST00000248139 BEAN1Q3B7T3 259 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms