RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 IL17DQ8TAD2 202 aa10.95□□□□□ -0.66
DDX49-201ENST00000247003 RNASE8Q8TDE3 154 aaKnown RBP10.95□□□□□ -0.66
DDX49-201ENST00000247003 IGLV4-3A0A075B6K6 122 aa10.95□□□□□ -0.66
DDX49-201ENST00000247003 COTL1Q14019 142 aa10.95□□□□□ -0.66
DDX49-201ENST00000247003 NHP2Q9NX24 153 aaKnown RBP10.95□□□□□ -0.66
DDX49-201ENST00000247003 ACANP16112 2415 aa10.94□□□□□ -0.66
DDX49-201ENST00000247003 CUBNO60494 3623 aa10.94□□□□□ -0.66
DDX49-201ENST00000247003 CRYBA4P53673 196 aa10.94□□□□□ -0.66
DDX49-201ENST00000247003 ZNRF2Q8NHG8 242 aa10.94□□□□□ -0.66
DDX49-201ENST00000247003 OPRPNQ99935 248 aaPredicted RBP10.94□□□□□ -0.66
DDX49-201ENST00000247003 GAGE10A6NGK3 116 aa10.93□□□□□ -0.66
DDX49-201ENST00000247003 Q6ZSN1 163 aa10.93□□□□□ -0.66
DDX49-201ENST00000247003 C16orf74Q96GX8 76 aa10.93□□□□□ -0.66
DDX49-201ENST00000247003 SPANXA1Q9NS26 97 aa10.93□□□□□ -0.66
DDX49-201ENST00000247003 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
DDX49-201ENST00000247003 LGALS3P17931 250 aaKnown RBP10.93□□□□□ -0.66
DDX49-201ENST00000247003 RPL35AP18077 110 aaKnown RBP10.93□□□□□ -0.66
DDX49-201ENST00000247003 TRBV7-3A0A075B6L6 115 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 TRAV4A0A0B4J268 109 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 TMEM238LA0A1B0GVL6 79 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 A6NJY4 79 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
DDX49-201ENST00000247003 WFDC10AQ9H1F0 79 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 WNK1Q9H4A3 2382 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 A0A1W2PPM0 123 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 K7EP13 123 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 FABP2P12104 132 aa10.91□□□□□ -0.66
DDX49-201ENST00000247003 RPL36AP83881 106 aaKnown RBP10.91□□□□□ -0.66
DDX49-201ENST00000247003 SRSF9Q13242 221 aaKnown RBP eCLIP10.91□□□□□ -0.66
DDX49-201ENST00000247003 RPL36ALQ969Q0 106 aaKnown RBP10.91□□□□□ -0.66
DDX49-201ENST00000247003 IGHV3-38A0A0C4DH36 116 aa10.9□□□□□ -0.66
DDX49-201ENST00000247003 K7EQD1 137 aa10.9□□□□□ -0.66
DDX49-201ENST00000247003 DAZ2Q13117 558 aaKnown RBP10.9□□□□□ -0.66
DDX49-201ENST00000247003 SAMD5Q5TGI4 173 aa10.9□□□□□ -0.66
DDX49-201ENST00000247003 CHCHD7Q9BUK0 85 aa10.9□□□□□ -0.66
DDX49-201ENST00000247003 TRBV10-1A0A0K0K1A3 114 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 TMEM223A0PJW6 202 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 J3QQQ9 107 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 K7EP34 96 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 K7ERJ3 54 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 ZNF22P17026 224 aaPredicted RBP10.89□□□□□ -0.67
DDX49-201ENST00000247003 RRN3P1Q2M238 152 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 Q6ZTI0 123 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 AMELXQ99217 191 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 NAA38Q9BRA0 125 aaKnown RBP10.89□□□□□ -0.67
DDX49-201ENST00000247003 NOP10Q9NPE3 64 aaKnown RBP10.89□□□□□ -0.67
DDX49-201ENST00000247003 C19orf73Q9NVV2 129 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 UBE2D4Q9Y2X8 147 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 MAST4O15021 2626 aa10.89□□□□□ -0.67
DDX49-201ENST00000247003 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.88□□□□□ -0.67
DDX49-201ENST00000247003 A0A0J9YXV3 536 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 IGKV2-29A2NJV5 120 aaPredicted RBP10.88□□□□□ -0.67
DDX49-201ENST00000247003 LEPROTO15243 131 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 ZNF479Q96JC4 524 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 Q9UF83 564 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 HIVEP2P31629 2446 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 INAFM1C9JVW0 142 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 LINC00482Q8N8I6 264 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 PLEKHB2Q96CS7 222 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 SPCS1Q9Y6A9 102 aa10.88□□□□□ -0.67
DDX49-201ENST00000247003 TRGV2A0A075B6R0 118 aa10.87□□□□□ -0.67
DDX49-201ENST00000247003 CIDEAO60543 219 aa10.87□□□□□ -0.67
DDX49-201ENST00000247003 GIG44P09565 113 aaPredicted RBP10.87□□□□□ -0.67
DDX49-201ENST00000247003 C12orf74Q32Q52 190 aa10.87□□□□□ -0.67
DDX49-201ENST00000247003 OR5A1Q8NGJ0 315 aa10.87□□□□□ -0.67
DDX49-201ENST00000247003 TSPEAR-AS2P59090 65 aa10.86□□□□□ -0.67
DDX49-201ENST00000247003 KRTAP10-3P60369 221 aa10.86□□□□□ -0.67
DDX49-201ENST00000247003 MRPS36P82909 103 aaKnown RBP10.86□□□□□ -0.67
DDX49-201ENST00000247003 SMAGPQ0VAQ4 97 aa10.86□□□□□ -0.67
DDX49-201ENST00000247003 DGAT2L7PQ6IED9 249 aa10.86□□□□□ -0.67
DDX49-201ENST00000247003 CEMP1Q6PRD7 247 aaPredicted RBP10.86□□□□□ -0.67
DDX49-201ENST00000247003 DAZ4Q86SG3 579 aaKnown RBP10.86□□□□□ -0.67
DDX49-201ENST00000247003 DAZ3Q9NR90 486 aaKnown RBP10.86□□□□□ -0.67
DDX49-201ENST00000247003 TIMM21Q9BVV7 248 aa10.86□□□□□ -0.67
DDX49-201ENST00000247003 SPANXB1Q9NS25 103 aaPredicted RBP10.86□□□□□ -0.67
DDX49-201ENST00000247003 A0A0J9YY99 117 aa10.85□□□□□ -0.67
DDX49-201ENST00000247003 INSL3P51460 131 aa10.85□□□□□ -0.67
DDX49-201ENST00000247003 HIVEP1P15822 2718 aa10.85□□□□□ -0.67
DDX49-201ENST00000247003 NF1P21359 2839 aa10.85□□□□□ -0.67
DDX49-201ENST00000247003 IGHV3-64A0A075B6Q5 118 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 TINCRA0A1B0GVN0 87 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 GAGE12BA1L429 117 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 CYSRT1A8MQ03 144 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 GAGE7O76087 117 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 GAGE12FP0CL80 117 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 GAGE12GP0CL81 117 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 GAGE12IP0CL82 117 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 RNASE13Q5GAN3 156 aaKnown RBP10.84□□□□□ -0.67
DDX49-201ENST00000247003 Q6ZUT4 128 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 MTORP42345 2549 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 SLC25A29Q8N8R3 303 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 CSNK1G2-AS1Q8NCQ2 148 aa10.84□□□□□ -0.67
DDX49-201ENST00000247003 A0A1B0GWB2 263 aa10.83□□□□□ -0.68
DDX49-201ENST00000247003 FOSL1P15407 271 aa10.83□□□□□ -0.68
DDX49-201ENST00000247003 C9orf66Q5T8R8 295 aa10.83□□□□□ -0.68
DDX49-201ENST00000247003 GEMIN7Q9H840 131 aaKnown RBP10.83□□□□□ -0.68
DDX49-201ENST00000247003 PLAC8L1A1L4L8 177 aa10.82□□□□□ -0.68
DDX49-201ENST00000247003 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
DDX49-201ENST00000247003 IGLL5B9A064 214 aa10.82□□□□□ -0.68
DDX49-201ENST00000247003 GAGE4Q13068 117 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 105.6 ms