RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 RASL10AQ92737 203 aa8.74□□□□□ -1.01
SOX9-201ENST00000245479 AVPP01185 164 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 DYNLRB2Q8TF09 96 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 UBE2E2Q96LR5 201 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 SIRPDQ9H106 197 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 TRAV13-1A0A0B4J241 112 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 F8W735 103 aaPredicted RBP8.73□□□□□ -1.01
SOX9-201ENST00000245479 IGHV3-53P01767 116 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 DEFB112Q30KQ8 113 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 SUMO4Q6EEV6 95 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 ZMAT4Q9H898 229 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 H3BT86 120 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 SRSF2Q01130 221 aaKnown RBP8.73□□□□□ -1.01
SOX9-201ENST00000245479 SHISA2Q6UWI4 295 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 DAND5Q8N907 189 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 NPBQ8NG41 125 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 AJUBAQ96IF1 538 aa8.73□□□□□ -1.01
SOX9-201ENST00000245479 ZFHX3Q15911 3703 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 GCN1Q92616 2671 aaKnown RBP8.72□□□□□ -1.01
SOX9-201ENST00000245479 NRACQ8N912 160 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 C20orf173Q96LM9 149 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 LENEPQ9Y5L5 61 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 IGHV3-33P01772 117 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 MSMBP08118 114 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 COX6B1P14854 86 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 LINC00158P58513 81 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 LINC01587Q99440 93 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 NIPBLQ6KC79 2804 aaeCLIP8.72□□□□□ -1.01
SOX9-201ENST00000245479 PRR9Q5T870 116 aa8.72□□□□□ -1.01
SOX9-201ENST00000245479 UBR5O95071 2799 aaPredicted RBP8.71□□□□□ -1.01
SOX9-201ENST00000245479 IGHV3-38A0A0C4DH36 116 aa8.71□□□□□ -1.01
SOX9-201ENST00000245479 MRPS12O15235 138 aaKnown RBP8.71□□□□□ -1.01
SOX9-201ENST00000245479 C5orf56Q8N8D9 126 aa8.71□□□□□ -1.01
SOX9-201ENST00000245479 ITPR2Q14571 2701 aa8.71□□□□□ -1.01
SOX9-201ENST00000245479 BAALC-AS2P0C853 105 aa8.71□□□□□ -1.02
SOX9-201ENST00000245479 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.02
SOX9-201ENST00000245479 TIMM17AQ99595 171 aa8.71□□□□□ -1.02
SOX9-201ENST00000245479 COL27A1Q8IZC6 1860 aaPredicted RBP8.7□□□□□ -1.02
SOX9-201ENST00000245479 ODF3BA8MYP8 253 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 J3KT08 172 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 ACYP1P07311 99 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 RBMY1BA6NDE4 496 aaKnown RBP8.7□□□□□ -1.02
SOX9-201ENST00000245479 RBMY1EA6NEQ0 496 aaKnown RBP8.7□□□□□ -1.02
SOX9-201ENST00000245479 RBMY1DP0C7P1 496 aaKnown RBP8.7□□□□□ -1.02
SOX9-201ENST00000245479 RBMY1A1P0DJD3 496 aaKnown RBP8.7□□□□□ -1.02
SOX9-201ENST00000245479 RBMY1CP0DJD4 496 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 UBE2D1P51668 147 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 C9orf47Q6ZRZ4 202 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 PAX4O43316 350 aa8.7□□□□□ -1.02
SOX9-201ENST00000245479 LINC01619G3V211 115 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 IGHV3-30P01768 117 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 IGHV3-30-5P0DP03 117 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 C11orf71Q6IPW1 123 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 MXRA5Q9NR99 2828 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 LGALS9O00182 355 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 CRIP2P52943 208 aaPredicted RBP8.69□□□□□ -1.02
SOX9-201ENST00000245479 RHOHQ15669 191 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 SPANXDQ9BXN6 97 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 MUC4Q99102 2169 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 TRIAP1O43715 76 aa8.69□□□□□ -1.02
SOX9-201ENST00000245479 DAZ1Q9NQZ3 744 aaKnown RBP8.69□□□□□ -1.02
SOX9-201ENST00000245479 A0A0B4J2C4 111 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 DEFB131AP59861 70 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 CFHR3Q02985 330 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 APRG1Q8IVJ8 170 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 PRO0461Q9UI25 63 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 IGHV3-30-3P0DP02 117 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 UBE2D3P61077 147 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 UBE2D2P62837 147 aa8.68□□□□□ -1.02
SOX9-201ENST00000245479 IGKV3D-7A0A0C4DH55 119 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 FAM223BA6NKX1 122 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 SMCPP49901 116 aaPredicted RBP8.67□□□□□ -1.02
SOX9-201ENST00000245479 FAM223AQ8IWN6 122 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 IGHV1OR15-1A0A075B7D0 117 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 A0A1B0GX51 115 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 HOXD3P31249 432 aaPredicted RBP8.67□□□□□ -1.02
SOX9-201ENST00000245479 C18orf65Q6ZTR6 163 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 CNFNQ9BYD5 112 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 XCL2Q9UBD3 114 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 B4DSR2 109 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 SLURP1P55000 103 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 Q9H8V8 135 aa8.67□□□□□ -1.02
SOX9-201ENST00000245479 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 CRLF1O75462 422 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 MDFICQ9P1T7 246 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 P0DMU3 169 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 FAM231AP0DMU4 169 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 KRTAP10-9P60411 292 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 ZFAND3Q9H8U3 227 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 PEMTQ9UBM1 199 aa8.66□□□□□ -1.02
SOX9-201ENST00000245479 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.65□□□□□ -1.02
SOX9-201ENST00000245479 IGHV7-4-1A0A0J9YVY3 117 aa8.65□□□□□ -1.02
SOX9-201ENST00000245479 IGKV2-29A2NJV5 120 aaPredicted RBP8.65□□□□□ -1.02
SOX9-201ENST00000245479 NDUFA4O00483 81 aa8.65□□□□□ -1.02
SOX9-201ENST00000245479 SOCS3O14543 225 aa8.65□□□□□ -1.02
SOX9-201ENST00000245479 CLPSL1A2RUU4 121 aa8.65□□□□□ -1.02
SOX9-201ENST00000245479 CEMP1Q6PRD7 247 aaPredicted RBP8.65□□□□□ -1.02
SOX9-201ENST00000245479 C11orf68Q9H3H3 251 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 256.3 ms