RNA–Protein interactions for RNA: ENST00000244763.8

SSR1-201, Transcript of signal sequence receptor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR1, Length 9,669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-201ENST00000244763 LINC00322Q6ZN03 302 aaPredicted RBP5.55□□□□□ -1.52
SSR1-201ENST00000244763 IGLV2-14P01704 120 aa5.55□□□□□ -1.52
SSR1-201ENST00000244763 ZNF706Q9Y5V0 76 aaPredicted RBP5.55□□□□□ -1.52
SSR1-201ENST00000244763 COL4A4P53420 1690 aaPredicted RBP5.55□□□□□ -1.52
SSR1-201ENST00000244763 MUC7Q8TAX7 377 aa5.55□□□□□ -1.52
SSR1-201ENST00000244763 C11orf71Q6IPW1 123 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 CASC2Q6XLA1 102 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 ODF1Q14990 250 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 WFDC11Q8NEX6 87 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 TRBV6-8A0A0A6YYG3 113 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 IBA57-AS1B1ANH7 110 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 NDUFC2O95298 119 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 PRO3102Q9H379 93 aa5.54□□□□□ -1.52
SSR1-201ENST00000244763 MAJINQ3KP22 176 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 NPSP0C0P6 89 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 ASPHD1Q5U4P2 390 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 Q6ZSV7 163 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 CCDC140Q96MF4 163 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 BPY2O14599 106 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 P0DMU3 169 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 FAM231AP0DMU4 169 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 FAM231CP0DMU5 169 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 C5orf47Q569G3 176 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 Q6ZUT4 128 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 LINC00474Q9P2X8 69 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 C19orf84I3L1E1 186 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 LY6G6DO95868 133 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 A0A087WZ39 114 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 HIGD2AQ9BW72 106 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 IGKV2-24A0A0C4DH68 120 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 CHCHD10Q8WYQ3 142 aaPredicted RBP5.53□□□□□ -1.52
SSR1-201ENST00000244763 Q6ZTI0 123 aa5.53□□□□□ -1.52
SSR1-201ENST00000244763 SS18L2Q9UHA2 77 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 MSMPQ1L6U9 139 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 ANKRD39Q53RE8 183 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 UPK3BQ9BT76 320 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 SPATA12Q7Z6I5 190 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 ANKHD1Q8IWZ3 2542 aaKnown RBP5.52□□□□□ -1.53
SSR1-201ENST00000244763 IGKV4-1P06312 121 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 IGKV1D-37A0A075B6S9 117 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 LY6LH3BQJ8 138 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 UBE2D1P51668 147 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 TDRG1Q3Y452 100 aa5.52□□□□□ -1.53
SSR1-201ENST00000244763 EML5Q05BV3 1969 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 K7ERS5 55 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 PIK3CD-AS1Q5SR53 167 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 CCDC168Q8NDH2 2452 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 SPANXB1Q9NS25 103 aaPredicted RBP5.51□□□□□ -1.53
SSR1-201ENST00000244763 A0A0J9YXY3 114 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 CRYGBP07316 175 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 SYCNQ0VAF6 134 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 LELP1Q5T871 98 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 FAM19A1Q7Z5A9 133 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 MBD6Q96DN6 1003 aa5.51□□□□□ -1.53
SSR1-201ENST00000244763 LINC00643Q86TS7 51 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 IGLV4-69A0A075B6H9 119 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 MRGPRG-AS1Q2M3A8 158 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 ZFHX2Q9C0A1 2572 aaPredicted RBP5.5□□□□□ -1.53
SSR1-201ENST00000244763 IGKV3D-7A0A0C4DH55 119 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 P0C879 139 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 DAND5Q8N907 189 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 PYGO1Q9Y3Y4 419 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 NDUFA7O95182 113 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 RS1O15537 224 aa5.5□□□□□ -1.53
SSR1-201ENST00000244763 TRBV6-5A0A0K0K1A5 114 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 PLA2G2AP14555 144 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 LINC01006Q8NI28 216 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 LRP4O75096 1905 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 IGLC6P0CF74 106 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 COX17Q14061 63 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.49□□□□□ -1.53
SSR1-201ENST00000244763 LINC00467Q9BRT7 94 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 USP17L23D6RBM5 183 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 CFAP126Q5VTH2 177 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 NEXN-AS1Q8NBZ9 246 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 ZFAND3Q9H8U3 227 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 A0A1B0GXF2 115 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 FXYD2P54710 66 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 MLST8Q9BVC4 326 aa5.49□□□□□ -1.53
SSR1-201ENST00000244763 NUPR2A6NF83 97 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 ZNF702PQ9H963 129 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 KPRPQ5T749 579 aaPredicted RBP5.48□□□□□ -1.53
SSR1-201ENST00000244763 TP53TG3Q9ULZ0 132 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 FAM236AA0A1B0GUQ0 79 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 FAM236BA0A1B0GV22 79 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 CSPG4Q6UVK1 2322 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 CD164L2Q6UWJ8 174 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 TIMM17BO60830 172 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 DHRS4-AS1Q9P1J3 65 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 FOXI1Q12951 378 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 ATP5EP2Q5VTU8 51 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 Q8N976 141 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 DOPEY1Q5JWR5 2465 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 PTPN13Q12923 2485 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 LOC107984640A0A0U1RRK4 108 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 C11orf1Q9H5F2 150 aa5.48□□□□□ -1.53
SSR1-201ENST00000244763 DEFB1P60022 68 aa5.47□□□□□ -1.53
SSR1-201ENST00000244763 IGLV4-3A0A075B6K6 122 aa5.47□□□□□ -1.53
SSR1-201ENST00000244763 ZNF80P51504 273 aaPredicted RBP5.47□□□□□ -1.53
SSR1-201ENST00000244763 FAM110AQ9BQ89 295 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms