RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 CTRLP40313 264 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 STAB1Q9NY15 2570 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 IGLV11-55A0A075B6I3 123 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 A0A096LNI7 61 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 KRTAP27-1Q3LI81 207 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 HIGD1BQ9P298 99 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 Q8N7P7 452 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 C2orf91Q6ZV80 131 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 A0A1W2PNU3 283 aaPredicted RBP5.73□□□□□ -1.49
RIF1-201ENST00000243326 CENPVL3A0A0U1RRI6 287 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 BUB3O43684 328 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 LHBP01229 141 aa5.73□□□□□ -1.49
RIF1-201ENST00000243326 C19orf71A6NCJ1 209 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 SEM1Q6ZVN7 128 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 ATOX1O00244 68 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 CGB7P0DN87 165 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 PIK3CD-AS1Q5SR53 167 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 C16orf54Q6UWD8 224 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 LINC00467Q9BRT7 94 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 CRIP1P50238 77 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 TRIAP1O43715 76 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 Q6ZS46 218 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 A0A1B0GXF2 115 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 XGP55808 180 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 ENHOQ6UWT2 76 aa5.72□□□□□ -1.49
RIF1-201ENST00000243326 IGHV4-30-2A0A087WSY4 118 aa5.71□□□□□ -1.49
RIF1-201ENST00000243326 LINC00694P0DN24 101 aa5.71□□□□□ -1.5
RIF1-201ENST00000243326 NANOS2P60321 138 aaKnown RBP5.71□□□□□ -1.5
RIF1-201ENST00000243326 Q8N9W7 124 aa5.71□□□□□ -1.5
RIF1-201ENST00000243326 M0QXV9 152 aa5.71□□□□□ -1.5
RIF1-201ENST00000243326 C10orf99Q6UWK7 81 aa5.71□□□□□ -1.5
RIF1-201ENST00000243326 UPK3BQ9BT76 320 aa5.71□□□□□ -1.5
RIF1-201ENST00000243326 FAM110AQ9BQ89 295 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 LINC00310P59036 64 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 K7EQD1 137 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 CCL24O00175 119 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 EDN2P20800 178 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 DAZ2Q13117 558 aaKnown RBP5.7□□□□□ -1.5
RIF1-201ENST00000243326 DAZ4Q86SG3 579 aaKnown RBP5.7□□□□□ -1.5
RIF1-201ENST00000243326 TMEM263Q8WUH6 116 aaKnown RBP5.7□□□□□ -1.5
RIF1-201ENST00000243326 DAZ3Q9NR90 486 aaKnown RBP5.7□□□□□ -1.5
RIF1-201ENST00000243326 CAMK2N2Q96S95 79 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 VSIG2Q96IQ7 327 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 KLK5Q9Y337 293 aaPredicted RBP5.7□□□□□ -1.5
RIF1-201ENST00000243326 PRR9Q5T870 116 aa5.7□□□□□ -1.5
RIF1-201ENST00000243326 NREPQ16612 68 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 SMAD5-AS1Q9Y6J3 95 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 Q8N976 141 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 SPANXA1Q9NS26 97 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 C8orf31Q8N9H6 132 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 DKK4Q9UBT3 224 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 FANCD2OSQ96PS1 177 aa5.69□□□□□ -1.5
RIF1-201ENST00000243326 C5orf56Q8N8D9 126 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 C3orf22Q8N5N4 141 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 CDKN2A-AS1Q9UH64 79 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 ETDCA0A1B0GVM5 59 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 COX7A2LO14548 114 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 STAB2Q8WWQ8 2551 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 RNF185Q96GF1 192 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 KLK12Q9UKR0 248 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 C9orf47Q6ZRZ4 202 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 ANKRD17O75179 2603 aaKnown RBP5.68□□□□□ -1.5
RIF1-201ENST00000243326 DEFB135Q30KP9 77 aa5.68□□□□□ -1.5
RIF1-201ENST00000243326 CRIP2P52943 208 aaPredicted RBP5.67□□□□□ -1.5
RIF1-201ENST00000243326 C3orf84H3BNL1 204 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 CCDC140Q96MF4 163 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 IGKV2-24A0A0C4DH68 120 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 MIAQ16674 131 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 TMEM190Q8WZ59 177 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 LOC100131303A0A0U1RQF7 123 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 HRCT1Q6UXD1 115 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 Q6ZTI0 123 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 ATP6V0E2Q8NHE4 81 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 IGHV4-30-4P0DP06 118 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 IGHV4-31P0DP07 118 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 C18orf65Q6ZTR6 163 aa5.67□□□□□ -1.5
RIF1-201ENST00000243326 C11orf21Q9P2W6 132 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 P0C879 139 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 LINC00269Q8N2A0 174 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 TIRAPP58753 221 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 LOC107984640A0A0U1RRK4 108 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 URB1-AS1Q96HZ7 61 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 ZNF580Q9UK33 172 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 IGHV1-58A0A0C4DH39 117 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 NDUFA7O95182 113 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 SPAG11BQ08648 103 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 NEXN-AS1Q8NBZ9 246 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 PIFOQ8TCI5 191 aa5.66□□□□□ -1.5
RIF1-201ENST00000243326 FAM236DA0A1B0GTK5 79 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 FAM236CP0DP71 79 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 CXCL5P42830 114 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 WFDC10BQ8IUB3 73 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 C20orf203Q8NBC4 194 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 CHKB-CPT1BH3BT56 60 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 A0A087WVE0 104 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 ADORA2A-AS1P86434 159 aa5.65□□□□□ -1.5
RIF1-201ENST00000243326 H0Y9J4 135 aa5.65□□□□□ -1.51
RIF1-201ENST00000243326 PRR3P79522 188 aaKnown RBP5.65□□□□□ -1.51
RIF1-201ENST00000243326 CEP192Q8TEP8 1941 aa5.65□□□□□ -1.51
RIF1-201ENST00000243326 WFDC10AQ9H1F0 79 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms